Cnup035974.2
Basic Information
- Insect
- Catocala nupta
- Gene Symbol
- retn
- Assembly
- GCA_963675205.1
- Location
- OY776096.1:10224561-10231837[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-19 6.2e-16 60.3 0.0 17 89 6 76 1 76 0.94 2 2 6.2 3.6e+04 -3.0 0.0 25 37 206 218 167 220 0.59
Sequence Information
- Coding Sequence
- ATGTTTTCAGCATTTGGTACTCCAATCAATCGATTGCCAATAATGGCAAAGTCTGTGCTTGATTTGTACGAGCTGTACAACTTGGTGATCGCTCGCGGAGGCCTCGTGGAGGTGATCAACAAGAAACTGTGGCAGGAGATCATCAAGGGACTGAGACTACCGTCCTCTATAACCTCAGCAGCATTTACGTTACGCACACAATACATGAAATATCTGTACGATTATGAGTGCGAGAAGAAAAATCTATCGACTCGGAGCGAGTTGGATGCTGCCATTGAGGGCAATAAGCGCGAAGGGAGGCGCGCTTCGGGACAGTATGACGCGCAAGCTGCATTGGCTATGCCGCCTCTGAACCGTGGCGTGCCGGCATCCTTGGCGCAGTTATCGCAGCACATGCAGCCTCTGTCTCTCTCGCTCGGCGGCGTCGCGCCGCGTCTACCGCCGCTACCGCCGCACGCGCCGCATCTGGCCCAGCATGACATCGAATACAGGGTCCGCGAGTACATGAAGATGATTCAAACACAACGGGAGCTTATGAGGAATGGTTCTGAATCACCGCCAAGTGTGAACGGTCCAGCGCCAATCATGTCGCCGCGTGACGCGGCCGCTCTCAGCGCCATCGACGTGTCGCGCCTGACTCTCTGGTCTCTCTACAACAACAATAACAACAACAGTCCACAGCCCGACCTCGAGCCACAGCGCGAGGCACTAAACCTGAGCGAGAGCCCGAACTCTAGCACGTCAGGGGGCAAGCGCGAGGCGTGTCGGTCGCCGGCGCCGCCTGCCAAGCGCCGCACGCCGCGGCCCGCGTCGCCGCgcgcctcgccgccgccgcacgccggcgccgccgccgccgcgcccgcgctcgcCGCGCACGCCGCGCTCGCCGCGCACGCCGCCCTGGCCGCGCCGCTCGCGCGCGCCTCGCGCCTCGACGagtcgccgccgccgcacgcgcTCAATGGGCCCAGCGCTAATGGAGTCAACGGTGCCGCCTTCAAGATCACCACTAGAGGTGATGCCAGCACAGGTGACCAGCAGCTAGTGGTGTCAATAGAACTGAACGGCGTCACGTACGAGGGCGTACTGTTCCCCGCCAACAACTCACAGAACGGACACAGGCAAATGGTCTCCTAA
- Protein Sequence
- MFSAFGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQTQRELMRNGSESPPSVNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSTSGGKREACRSPAPPAKRRTPRPASPRASPPPHAGAAAAAPALAAHAALAAHAALAAPLARASRLDESPPPHALNGPSANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPANNSQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636054;
- 90% Identity
- iTF_00677326;
- 80% Identity
- -