Bany002999.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- retn
- Assembly
- GCA_947172395.1
- Location
- OX359224.1:5251172-5264619[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-20 9.1e-17 61.4 0.0 16 89 9 80 3 80 0.95 2 2 3.6 7.3e+03 -2.4 0.0 25 38 196 219 170 220 0.51
Sequence Information
- Coding Sequence
- ATGAAATCCTGGGctccgtggcgcagtgGCACACCAATCAACCGGCTGCCGATCATGGCCAAGTCGGTGCTGGATCTGTACGAGCTGTACAATCTGGTGATCGCGCGCGGCGGCCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCTTGCGGTTGCCTTCCTCCATCACATCGGCCGCCTTCACTTTGCGCACACAATATATGAAATACCTGTACGATTACGAGTGCGAGAAGAAGAACCTGTCAAcgcgcaatgagctggacgccgctatcgagggcaacaagcgcgaggggcgccgcgcctctggtcaatacgacgcgcaggccgcattggctatgCCACCTCTAAACAGAATGCCGGCGTCTCTCGCGCAGTTGTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTGGGCGGCGGGGTGGGCCTGCCCCGTCTGCCGCCGCTGCCGCCGCACGCGCCGCACATCACGCCGCACGACATAGAGTACCGCGTGCGCGAGTACATGAAGATGATCCAGCAGCAACGCGAATTGATCCGCAACGGTTCGGAGTCACCGCCGAGTGCCCCGATGGTGTCTCCCCGGGACGCGGCGCTGTCAGCCATCGACGTGTCGCGTCTCACGCTCTGGTCTCTGTACAACAACAACAACAACAGCCCTCAACCAGACCTCGAGCCGCAACGTGAGGCCTTAAACCTAAGTGAAAGTCCAAATTCAAGCATCAGCGGCGGCAAGCGGGAGGCCTGCCGCTCCCCACCCCCGCCGGCGAAGCGCCGCACCCCGCGCCCGCCCTCCCCCGCCGCCCCCTCCCCGCAGCTGCCGCGCGAGCCCTCACCGCGCACGCACGCGCATCTCAACGGCAACTCTAATGGCGTCAACGGCGCCGCCTTCAAAATCACGACGAGAGGTGACGCAAACACAGGAGACCAACAACTCGTGGTGTCAATTGAACTGAACGGCGTAACGTATGAGGGAGTTCTGTTTCCGTCACAAAATGGCAACGGTCAAAATGGCCACCGGCAAATGGTGTCTTAA
- Protein Sequence
- MKSWAPWRSGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRNELDAAIEGNKREGRRASGQYDAQAALAMPPLNRMPASLAQLSQHMQPLSLSLGGGVGLPRLPPLPPHAPHITPHDIEYRVREYMKMIQQQRELIRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSISGGKREACRSPPPPAKRRTPRPPSPAAPSPQLPREPSPRTHAHLNGNSNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636054;
- 90% Identity
- iTF_00642129;
- 80% Identity
- -