Lfle006856.1
Basic Information
- Insect
- Laspeyria flexula
- Gene Symbol
- retn
- Assembly
- GCA_905147015.1
- Location
- LR989966.1:9764682-9771014[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-20 1.7e-16 60.8 0.0 16 89 16 87 3 87 0.94 2 2 3.4 1e+04 -2.6 0.0 25 37 217 229 177 231 0.50
Sequence Information
- Coding Sequence
- ATGTCGTTATTGTCATCGTTTTTATTTATAGTAGGAAGGTTACCTTCAGGCACTCCAATCAACCGGTTGCCGATAATGGCCAAGTCTGTGCTGGACCTTTACGAACTGTATAACCTGGTGATAGCTCGCGGAGGTCTGGTTGAGGTGATCAACAAGAAACTGTGGCAGGAGATCATCAAGGGGCTGAGACTGCCGTCATCGATCACGTCGGCTGCATTTACGTTACGCACACAATACATGAAGTACCTATACGACTATGAGTGCGAGAAGAAGAACTTGTCCACCCGGAGCGAGCTCGACGCAGCTATAGAAGGCAACAAGCGCGAAGGAAGGCGCGCCTCGGGACAGTACGACGCACAAGCTGCTTTAGCCATGCCGCCTCTAAACCGTGGCGTGCCGGCGTCTCTTGCGCAGCTCTCTCAGCACATGCAGCCTCTCTCGCTCTCTCTCGGAGGAGTAGCGCCTCGCCTTCCACCGCTACCGCCACATGCGCCTCACCTAGCGCAGCATGACATAGAATACAGGGTGCGCGAGTATATGAAGATGATACAGCAGCAACGGGAGCTTATGAGGAATGGTTCCGAGTCCCCACCGAGCGTGAACGGCCCCGCACCCATCATGTCTCCTCGTGATGCTGCAGCCCTTAGTGCTATCGACGTGTCGCGGCTCACCCTCTGGTCTCTATACAACAACAATAACAACAACAGCCCACAACCTGATCTCGAGCCACAACGAGAGGCACTAAACCTGAGCGAGAGCCCGAACTCTAGCACGTCAGGCGGCAAGCGCGAGGCATGCCGGTCGCCGGCGCCGCCCGCGAAGCGCCGCACGCCGCGCCCGGCCTCGCCGCGCACGGCACCGCCCTCGCCCACGCTGCCGGCGCCACTCTCGCGCGCCACTCGCCTCGACCCTCCCTCGCCGCCGCATGCGCTCAACGGACCCAACGCGAATGGAGTCAATGGAGCTGCGTTCAAAATCACTACTAGAGGTGACGCGAGCACAGGTGACCAACAACTCGTGGTGTCGATAGAACTGAATGGTGTGACGTATGAAGGCGTTCTATTTCCCGCCAACAACTCACAGAATGGACACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MSLLSSFLFIVGRLPSGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSVNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSTSGGKREACRSPAPPAKRRTPRPASPRTAPPSPTLPAPLSRATRLDPPSPPHALNGPNANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPANNSQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636054;
- 90% Identity
- iTF_00677326;
- 80% Identity
- -