Lsal011543.1
Basic Information
- Insect
- Leucoma salicis
- Gene Symbol
- retn
- Assembly
- GCA_948253155.1
- Location
- OX411820.1:8471512-8481936[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-21 6.8e-18 65.6 0.0 6 89 38 119 35 119 0.94 2 2 4.4 1.5e+04 -2.8 0.0 25 37 249 261 210 263 0.54
Sequence Information
- Coding Sequence
- ATGTTTATACTCGTCAAATGGACCTCGCGGCGCGCTCAAAATTGTCCGAACCAAAAGACAAACAAACCTCCAAAAGATAAATTGTTATATTTAATAAAGACTGGCGCTTTGATAAGAAAACTCAACACTATTATAATGCTACAAGGAACACCGATCAATCGGCTGCCAATCATGGCAAAGTCAGTACTGGACCTCTACGAGCTGTACAACTTAGTGATTGCTCGTGGGGGCCTCGTGGAAGTTATAAACAAGAAACTATGGCAAGAGATCATCAAGGGCTTAAGATTGCCGTCATCAATCACGTCTGCTGCGTTCACTTTGCGTACACAGTACATGAAGTATTTGTACGATTATGAATGCGAGAAGAAGAATTTGTCAACTCGGAGTGAGTTGGACGCTGCCATCGAAGGCAACAAACGGGAGGGAAGACGCGCTTCTGGACAGTACGATGCTCAAGCTGCTTTAGCTATGCCGCAACTGAACCGCGGCGTGCCAGCCTCCCTGGCTCAACTGTCGCAACACATGCAGCCGCTGTCGCTGTCGCTCGGCGGAGTGACGCCGCGACTACCTCCGCTGCCGCCACACGCGCCTCACCTCGCGCAGCACGACATCGAGTACAGAGTACGCGAGTATATGAAGATGATACAACAGCAAAGAGAGCTCATGAGGAATGGCTCAGAATCTCCACCTAGTGTAAACGGTCCAGCGCAGATCATGTCGCCTCGTGACGCGGCCGCCCTCAGCGCCATCGACGTGTCGCGACTCACGTTATGGTCGCTCTACAATAACAACAACAATAACAGTCCCCAACCAGATCTGGAACCACAACGCGAGGCACTAAACCTGAGCGAGAGCCCGAACTCTAGCACGTGCGGCAGCAAGCGTGAGGCGTGCCGGTCGCCGCCCCCGCCCGCCAAGCGCCGCACCCCGCGCCCCGCCTCGCCCCCCTCGCCCCGCTCGCCGCACGTCGCGCCGCGCTCCAGGCTGCCCGCCGACGCGTCGCCGCCGCACGCGCTTAACGGCCCTAACGCCAACGGCGTCAATGGCGCAGCATTCAAAATAACCAGCAGAGGCGATGCCAGTACAGGCGACCAGCAACTGGTGGTGTCAATAGAATTGAACGGCGTAATGTACGAGGGAGTACTCTTTCCCGCCAATAACTCACAAAACGGGCACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MFILVKWTSRRAQNCPNQKTNKPPKDKLLYLIKTGALIRKLNTIIMLQGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPQLNRGVPASLAQLSQHMQPLSLSLGGVTPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSVNGPAQIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSTCGSKREACRSPPPPAKRRTPRPASPPSPRSPHVAPRSRLPADASPPHALNGPNANGVNGAAFKITSRGDASTGDQQLVVSIELNGVMYEGVLFPANNSQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636054;
- 90% Identity
- iTF_00677326;
- 80% Identity
- -