Temo000642.1
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- retn
- Assembly
- GCA_947095525.1
- Location
- OX352746.1:11942548-11951630[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-20 1.9e-16 60.7 0.0 16 89 12 83 8 83 0.94 2 2 5.4 1.1e+04 -2.6 0.0 25 37 213 225 173 227 0.50
Sequence Information
- Coding Sequence
- ATGCAACAAGGCCCAAGTCTACGGGAAAAACCAGCAGGTACTCCAATCAACCGATTGCCAATAATGGCCAAGTCTGTGCTAGACCTGTATGAGCTGTATAACCTGGTGATAGCTCGCGGAGGCTTGGTCGAGGTGATCAATAAGAAGCTCTGGCAGGAGATCATCAAGGGGCTGAGACTACCTTCGTCTATCACGTCGGCTGCTTTCACGTTACGCACACAATACATGAAATATTTGTATGATTACGAATGTGAGAAGAAGAATCTGTCAACCCGGAGTGAGCTGGATGCTGCGATCGAAGGCAACAAGCGCGAGGGAAGGCGGGCCTCGGGCCAGTACGACGCACAAGCCGCATTAGCCATGCCGCCTTTGAACCGCGGCGTGCCTGCGTCGTTAGCGCAGCTCTCTCAGCATATGCAGCCTCTGTCCCTCTCACTCGGAGGCGTTGCGCCGCGCCTGCCACCGTTACCGCCGCATGCACCGCATTTAGCGCAGCATGACATAGAATACAGGGTGCGCGAGTATATGAAGATGATACAGCAGCAGCGGGAGCTTATGAGGAATGGTTCCGAGTCCCCACCAAGTGTAAACGGTCCAGCGCCTATCATGTCCCCTCGTGATGCAGCAGCCCTCAGTGCCATCGATGTGTCGCGGCTCACACTCTGGTCGCTCTACAACAACAACAATAACAACAGCCCACAGCCAGACCTCGAGCCACAGCGAGAGGCACTAAACCTGAGCGAGAGCCCGAACTCTAGCACGTCTGGCGGGAAACGCGAGGCATGCCGGTCACCGGCGCCGCCAGCCAAGCGCCGCACGCCTCGGCCAGTGTCTCCGCGCGCTTCGCCCCCGTCACCGGCGCTATCGGCGCCGCTAGCCCGCGCCAATCGACTCGACCCGCCGTCACCGCCGCACGGGCTCAACGGATCCAGTGCCAATGGAGTTAACGGCGCGGCGTTCAAGATCACTACAAGAGGTGACGCAAACACAGGTGACCAGCAGCTAGTGGTGTCGATAGAACTGAACGGCGTCACGTATGAAGGCGTGCTGTTCCCTGCAAATAACTCACAGAATGGACACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MQQGPSLREKPAGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSVNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSTSGGKREACRSPAPPAKRRTPRPVSPRASPPSPALSAPLARANRLDPPSPPHGLNGSSANGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPANNSQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636054;
- 90% Identity
- iTF_00677326;
- 80% Identity
- -