Pmus016663.2
Basic Information
- Insect
- Pelosia muscerda
- Gene Symbol
- retn
- Assembly
- GCA_963691645.1
- Location
- OY829115.1:9563051-9571661[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-19 1.9e-16 60.9 0.0 16 89 15 86 10 86 0.94
Sequence Information
- Coding Sequence
- ATGATTAAGTGCAGACAGGAAGACGGATTGACAAATAGTCGTTTAGGAACACCAATAAACAGATTGCCAATAATGGCCAAGTCTGTCCTAGACTTGTATGAACTGTATAACCTGGTGATTGCCCGCGGCGGTCTCGTCGAGGTGATTAACAAGAAGCTCTGGCAAGAAATTATCAAGGGGTTGAGACTGCCTTCGTCAATCACATCAGCGGCTTTCACACTACGGACACAGTATATGAAATACTTGTACGACTATGAGTGTGAGAAGAAGAATCTATCGACACGGAGTGAACTGGACGCCGCTATTGAGGGCAACAAACGTGAAGGAAGACGCGCCTCGGGACAGTATGACGCACAAGCAGCATTAGCGATGCCGCCCCTAAACCGCGGCGTGCCTGCTTCACTAGCACAACTCACCCAACACATGCAGCCTCTTTCCCTATCGCTCGGAGGAGTGGCATCACGCCTACCCCAGATGCCGCCACACCCGCCGCATCTTACACCACATGAACTCGAGTATAGGGTACGGGAGTACATGAAAGTGCTCCACCAACAGAAAGAACTGATGAGGAATGGATCGGAATCACCGCCGAACATGAATGGTCCAGCGCCTACCATGTCCCCGCGTGACGCAGCCGCTCTCAATGCATTTGACATGTCTCGCCTCACTCTCTGGtcaatttacaataataacaatatcaaCAACAGCAGTCCACAGCCTGAAATTGAACCACAACGTGAAGCGTTAAACCTCAGCGAGAGCCCGAACTCTAGCACATCTGGGGGCAAACGCGAGGCCTGCAGATCACCGCCGCCTCCTGCCAAACGCCGCACTCCACGGCCCGCTTCGCCCCGTGCCTCGCCACCATCACCAACTTTGTCAACTCCGCTGTCACGTGCCAACCGACTTGATTCTGCATCACCGTCGCAATCTCACAATGGACCCACAACCAACGGAGTTAATGGGGCAGCTTTCAAGATTACTACCAGAGGTGATGCCAGCACAGGCGACCAGCAGTTGGTAGTGTCAATAGAGTTGAATGGTGTCACATACGAAGGTGTACTCTTCCCCACCAATAATTCACAGAACGGACACAGGCAAATGGTCTCCTAA
- Protein Sequence
- MIKCRQEDGLTNSRLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLTQHMQPLSLSLGGVASRLPQMPPHPPHLTPHELEYRVREYMKVLHQQKELMRNGSESPPNMNGPAPTMSPRDAAALNAFDMSRLTLWSIYNNNNINNSSPQPEIEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPASPRASPPSPTLSTPLSRANRLDSASPSQSHNGPTTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPTNNSQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636054;
- 90% Identity
- -
- 80% Identity
- -