Hpro025774.1
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- retn_1
- Assembly
- GCA_905147285.1
- Location
- LR990144.1:14252111-14265065[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-19 3.6e-16 60.5 0.0 17 89 24 94 16 94 0.95 2 2 6.7 1.9e+04 -2.8 0.0 25 37 224 236 185 238 0.53
Sequence Information
- Coding Sequence
- ATGTTGCACCGGATAGGGCCGGGCGGTGTTTTAATGTCTCTCGGACGGAATTACGCTGGATTGTTCTCAGGAACACCAATCAACCGATTGCCAATAATGGCTAAGTCAGTCCTAGACCTGTATGAGCTGTACAACCTGGTGATAGCCCGAGGAGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGTTTGCGGCTCCCGTCGAGCATCACGTCGGCTGCCTTCACGTTACGTACACAATACATGAAATACCTGTACGATTACGAATGTGAGAAGAAGAATCTATCAACCAGGAATGAGCTGGATGCGGCCATTGAAGGCAATAAGCGTGAGGGAAGACGCGCGTCAGGACAGTATGACGCGCAAGCTGCTTTGGCTATGCCACCTTTAAACCGTGGCGTGCCAGCTTCTTTGGCACAATTGTCCCAGCATATGCAGCCCTTGTCTCTCTCGCTCGGTGGTGTAGCGCCACGTCTGCCACCACTGCCACCCCATGCGCCACACCTGGTGCAACATGACATTGAGTACAGAGTACGGGAGTACATGAAGATGATTCAGCAGCAAAGAGAACTTATGAGAAATGGTTCGGAATCCCCCCCAAGCGTGAACGGCCCGGCTCCAATCATGTCTCCCCGCGACGCCGCGGCCCTCAGCGCCATCGACGTGTCCCGCCTCACACTGTGGTCCCtctacaacaacaacaacaacagccCACAGCCAGACCTCGAACCACAACGCGAAGCACTAAACCTGAGCGAGAGCCCGAACTCTAGCGCATCAGGGGGCAAGCGTGAAGCGTGCCGGTCGCCCGCGCCGCCCGCCAAGCGCCGGACTCCACGCCCCGCGTCGCCACGCGCGTCGCCCCGCACCTCGCCGCGCGCCTCCCCGCCCGCGCTGCCCGCTGCGCTCGCGCGTGCCTCACGCCTCGACCCGCCTTCGCCGCCGCATTCGCTCAATGGTGGCAACTCTAATGGAGTCAACGGAGCCGCGTTCAAAATTACTACAAGAGGAGACGCGACCACCGGCGACCAGCAGCTAGTGGTATCCATAGAGCTGAACGGCGTCACGTACGAGGGCGTGTTGTTCCCGGCCAATGGCGCGCAGAACGGACACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MLHRIGPGGVLMSLGRNYAGLFSGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRNELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLVQHDIEYRVREYMKMIQQQRELMRNGSESPPSVNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSASGGKREACRSPAPPAKRRTPRPASPRASPRTSPRASPPALPAALARASRLDPPSPPHSLNGGNSNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPANGAQNGHRQMVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636054;
- 90% Identity
- iTF_00677326;
- 80% Identity
- -