Basic Information

Insect: Drosophila percnosoma
Gene Symbol: retn
Assembly: GCA_035043855.1
Location: JAWNMQ010000227.1:5901408-5927205[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.8e-26 9.4e-23 80.4 0.0 2 89 318 403 317 403 0.96

2 3 7.7 1.3e+04 -3.3 0.6 53 76 523 549 516 566 0.52

3 3 4.3 7e+03 -2.5 0.3 20 40 564 591 541 604 0.53

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.8e-26	9.4e-23	80.4	0.0	2	89	318	403	317	403	0.96
2	3	7.7	1.3e+04	-3.3	0.6	53	76	523	549	516	566	0.52
3	3	4.3	7e+03	-2.5	0.3	20	40	564	591	541	604	0.53

Sequence Information

Coding Sequence: ATGCAACTCCGAGTGCATCCGAATATGGATTGTAGCGGCcgttcaaataataatattgagcGCGATTCCGATTTGGGTGACGATTTGTCCCACGGTGATCGTACGGATGACGAGATGCGCGACTGTGATTCCGTTGACGGGGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCCCGGCTCAGTCACACAGTTGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgccGCCGAATCATCCGCTTAACGCCCTCGGCAGCTTTATGAGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCAGCGGCAGCACATGCCGCAGCCTTTGGTGCCAACATGCTGCCCACAACGATCAGTACGGCCTTTCCGCTGCCGCACAATTCGGTGGCAgcggctgcggcagctgcatcCTTTGGCCATGCCACAAATGTGAATGCCAACCCCGTGCCGCCAGCCAGCAATGGCGCCAGCTACAATGGTGGGCCCAGTAGTGGACatgcaacaggagcagctgctAGCATTGGCAACAGTGGAGgcgcaggagcaggagcaggaggtgCTGGAGGCAACAGCAGTGgtgttaacaacaacaacaacaatagcaacaacaacaataacaacaacaatgctggcAATGGTCATCCCTTTTCATTTGCATCGCCAACAGCGCCGAGCAGCACCAAAGAAGCGCGCCACTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATgatttgttttcgtttatGCAAAAGCGAGGCACGCCCATCAACCGCCTGCCCATAATGGCCAAGTCGGTGCTGGATCTATATGAGCTATATAATCTGGTGATAGCTCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTACATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAAAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAGCCAGATGCCACTGACAACAATTTCGCGACCACCGTTGCCTGGGGGCATGCAACAGATGTCGCCACTGGCGCTGGTCACACATGCCGCGGCTGCGAACAATCAGCAGGCACAGGCagcggccgcagcagcagcagcacatcgaCGGCTGATGGGCGGGCCCGCCTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAATATCTGCAGCTTATACAGGCgaagaaggagcagcagcagcagcaacagattgCGCCAATTCTGGGCGCCACACATccccaccagcagcagcaacagcagcagcagcaacaatcgctgcatcatcaccaacaacaacaacagcagcagcagcagcagagacagcGCTCACAAAGTCCCGAGCTGAGCACACGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGATCGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGGCCCATCAGCCGCCACCGGCGAAACGTGTGGGCAGCGGTCTAATGCCGCCCGGATTTCCCGCCAACTTTTACTTGAATCCCCACAATATGGccgctgtggcagcagcagccggttTTCATCACCAGGCCGCcaacaatcatcatcatcagcagcagcaacagtcgcagcagcaggatgCAGCATCTGAGGGTGAACCAGAGGATGAGTATGGCAATGGGGAGCACAACACCACCGGCAACTCATCGTCGCTGCATGATGACAATGAGCCACAGCAGCTGAATGGACACCACCtccaccatcatcatcatgaccATCACGATCTGCATCATGATCTTCATCAtgagcatcatcatcatcagaatCATCTGGACAAGTCGGATGACTCGGCCATTGAGAATTCACCCAGCAcatcgacaacgacaacaacaacaacatcatccaCATCCAAAGCGCATCGTCACAGCTCGCCGGTGtccacaaaaaagaagagcagcggcaactgcaacaacagcagcaccaccaccaacaacaagacGCAGTCCTTGTCGTGTGCGAAGGatgcaggcaacaacagcagcaacgccaacagTTCCAGCGATGTCAAACTGAATCCCCTCGAGACGCTCAGTCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCTAATGGAGACCAGCAGTTGATTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGGCGTGCTGGTGGCAGCCACCCAAGCAGcggcagttgcagcagccaaGTTAGAGGCAGGTCAAACTGAGCGGGAGCAGGCAGAGACtccatctgctgctgctgctgaggagCCAGCAGTgaggaacagcagcatcaCTGAGGATGAGCTCAAGCATGAAAACAGCCAGGAACTTGGCCAGAACGAGGCAATTGATGAGGAAACAAcgcaggaacaacaacaacagcaacaacaactcacagATGACATTGTGAATGGACCGAGTGCTGTTGGGGCGGGAATTGGAGGGGTTGGCGTTGGGGGCGCAAGTCTGCTGAAGGATGCTGTGGTCAGTTCATAG
Protein Sequence: MQLRVHPNMDCSGRSNNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNSVAAAAAAASFGHATNVNANPVPPASNGASYNGGPSSGHATGAAASIGNSGGAGAGAGGAGGNSSGVNNNNNNSNNNNNNNNAGNGHPFSFASPTAPSSTKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQIAPILGATHPHQQQQQQQQQQSLHHHQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERDRDPTPEPTDLEETAHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQQSQQQDAASEGEPEDEYGNGEHNTTGNSSSLHDDNEPQQLNGHHLHHHHHDHHDLHHDLHHEHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSTSKAHRHSSPVSTKKKSSGNCNNSSTTTNNKTQSLSCAKDAGNNSSNANSSSDVKLNPLETLSLLSGMQFQVARNGTNANGDQQLIVNLELNGIKYSGVLVAATQAAAVAAAKLEAGQTEREQAETPSAAAAEEPAVRNSSITEDELKHENSQELGQNEAIDEETTQEQQQQQQQLTDDIVNGPSAVGAGIGGVGVGGASLLKDAVVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00511055;
90% Identity: iTF_00558440; iTF_00597140; iTF_00566569; iTF_00521130; iTF_00524906; iTF_00521949; iTF_00615980; iTF_00511055; iTF_00560015; iTF_00619622; iTF_00497165; iTF_00582741; iTF_00513240; iTF_00496376; iTF_00552089; iTF_00543524; iTF_00609660;
80% Identity: -