Dyoo005379.1
Basic Information
- Insect
- Drosophila yooni
- Gene Symbol
- retn
- Assembly
- GCA_035043035.1
- Location
- JAWNNG010000402.1:1778726-1806268[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.7e-26 9.1e-23 80.4 0.0 2 89 300 385 299 385 0.96 2 3 7 1.1e+04 -3.2 0.2 52 77 504 531 498 539 0.55 3 3 4.5 7.2e+03 -2.6 0.3 20 40 548 573 522 586 0.52
Sequence Information
- Coding Sequence
- ATGCTCAGCAGTGTAGCCGCACCAATACCAATAACACAGCGAGCACAATCCCACGGTGATCGTACGGATGACGAGATGCGCGACTGTGATTCCGTTGACGGGGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCCCGGCTCAGTCACACAGTTGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgccGCCGAATCATCCGCTTAACGCCCTCGGCAGCTTTATGAGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCAGCGGCAGCACATGCCGCAGCCTTTGGCGCCAACATGCTGCCCACAACGATCAGTACGGCCTTTCCGCTGCCGCACAATTCGGTGgcagcggctgcggcagctgcatcCTTTGGCCATGCCACAAATGTGAATGCCAATCCCGTGCCGCCAGCCAGCAATGGCGCCAGCTACAATGGTGGGCCCAGTGGTGGACATGTaacaggagcagctgctggcattgGCAACAGTGGAGGCGCAGGAGCTGGAGGTGCTGGAGGCAACAGCAGTGgtgttaacaacaacaacaacaacaacaatagcaacaacaacaataacaacaacaatgccggcAATGGTCATCCCTTTTCATTTGCATCGCCAACAGCGCCGAGCAGCACCAAAGAAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGAtgatttgttttcgtttatgCAAAAGCGAGGCACGCCCATCAACCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATATAATCTGGTGATAGCTCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTACGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAGCCAGATGCCACTGACGACAATTTCGCGACCACCGTTGCCTGGGGGCATGCAACAGATGTCGCCACTGGCGTTGGTCACACATGCCGCGGCTGCGAACAATCAGCAGGCGCAGGCagcggccgcagcagcagcagcacaccgACGGCTGATGGGCGGGCCCGCCTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAATATCTGCAGCTCATACAGGCgaagaaggagcagcagcagcagcaacagattgCGCCAGTTCTGGGCGCCACACATccccaccagcagcaacagcagcagcagcaacaatcgctgcatcatcaccaacaacaacaacaacaacaacagcagcagcagcgtcagcgcTCACAAAGTCCCGAGCTGAGCACACGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGcGAAGCCTTGAACCTTTCCGATTCGCCGCCaactttgaatttgaatcaCATAAAACGGGAAAGGGATCGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGGCCCATCAGCCGCCACCGGCGAAACGTGTGGGCAGCGGCCTAATGCCGCCCGGATTTCCCGCCAACTTTTACTTGAATCCCCACAATATGGCCgctgtggcagcggcagccggTTTTCATCACCAGGCCGCcaacaatcatcatcatcagcagcagcaacagtcgcagcagcaggatgCAGCGTCTGAGGGTGAACCTGAGGATGAGTATGGCAATGGGGAGCACAACACCACCGGCAACTCATCGTCGCTGCATGATGACAGTGAGCCACAGCAGCTGAATGGCCACCACCtccaccatcaccatcatgACCATCACGATCTGCATCATGATCTTCATCAtgagcatcatcatcatcagaatCATCTGGACAAGTCGGATGACTCCGCCATTGAGAACTCACCCAGCAcatcgacaacgacaacaacaacaacatcatccaCATCCAAAGCGCATCGTCACACCTCGCCGGTGtccacaaaaaagaagagcagcggcaactgcaacagcagcagcagcaccaccaccaacaacaagacgCAGTCCTTGTCGTGTGCGAAGGatgcaggcaacaacagcagcaacgccaacaGTTCCAGCGATGTCAAACTGAATCCCCTTGAGACGCTCAGTCTCCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCTAATGGAGAGCAGCAGTTGATTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCacccaagcagcagcagttgcggcAGCCAAGTCAGAGGCAGGTCAAACTGAGCGGGAGCAGGTAGAgacgccagctgctgctgctgaagagTCAGCagtgaggagcagcagcatcactgAGGATGAGCTCAAGCATGAAAACAGCCAGGAACTTGGCCAGAACGAGGCAATTGATGAGGAAACAAcgcatgaacaacaacaacaacaacaacaacagcagcagcaacaactcacAGATGACATTGTGAATGGAGCGATTGCTGTTGGGGCGGGAATTGGTGGGATTGGTGTTGGGGGTGCAAGTCTGCTGAAGGATTCTGTGGTCAGTTCGTAG
- Protein Sequence
- MLSSVAAPIPITQRAQSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNSVAAAAAAASFGHATNVNANPVPPASNGASYNGGPSGGHVTGAAAGIGNSGGAGAGGAGGNSSGVNNNNNNNNSNNNNNNNNAGNGHPFSFASPTAPSSTKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQIAPVLGATHPHQQQQQQQQQSLHHHQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERDRDPTPEPTDLEETAHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQQSQQQDAASEGEPEDEYGNGEHNTTGNSSSLHDDSEPQQLNGHHLHHHHHDHHDLHHDLHHEHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSTSKAHRHTSPVSTKKKSSGNCNSSSSTTTNNKTQSLSCAKDAGNNSSNANSSSDVKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAATQAAAVAAAKSEAGQTEREQVETPAAAAEESAVRSSSITEDELKHENSQELGQNEAIDEETTHEQQQQQQQQQQQQLTDDIVNGAIAVGAGIGGIGVGGASLLKDSVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00511055;
- 90% Identity
- iTF_00573828;
- 80% Identity
- -