Dfun009194.1
Basic Information
- Insect
- Drosophila fungiperda
- Gene Symbol
- retn
- Assembly
- GCA_035042345.1
- Location
- JAWNLM010000171.1:976426-1002822[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-26 9.1e-23 80.4 0.0 2 89 319 404 318 404 0.96 2 2 3.8 5.4e+03 -2.2 0.2 14 14 565 565 522 609 0.59
Sequence Information
- Coding Sequence
- ATGCAACTCCGAGTGCATCCGACTATGGATTGTAGCGGCcgttcaaataataatattgagcGCGATTCCGATTTGGGTGACGATTtgTCCCACGGTGATCGTACGGATGACGAGATGCGCGACTGTGATTCCGTTGACGGGGAACATCATCAGATGAGCGCCAAGGCGGCAATTGCAGCCCGGCTCAGTCACACAGTTGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgccGCCGAATCATCCGCTTAACGCTTTGGGCAGCTTTATGAGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCAGCGGCAGCACATGCCGCAGCCTTTGGCGCCAACATGCTGCCCACAACGATCAGTGCGGCCTTTCCGTTGCCGCACAATTCGGTGGCAgcggctgcggcagctgcatcCTTTGGTCATGCCACAAATGTGAATGCCAATCCGGTGCCGCCAGCCAGTAATGGCGCCAGCTACAATGGTGTGCCCAGTGTTGGAcatggagcaggagcagctgttGGCGTTGGCAATAGTGCTGGAACAGGTGCAGGAGGTGCTGGAGGCAACAACGCTGGtgttagcaacaacaacaacaacaacaatagcaacagtaacaacaacaacaacaacaatgccggCAATGGTCATCCCTTTTCATTTGCATCGCCAACAGCGCCAAGCAGCACCAAAGAAGCGCGCCACTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGAAAGGAGTTTCTCGATGATTTGTTTTCCTTTATGCAAAAGCGTGGCACGCCCATCAACCGACTGCCCATTATGGCCAAATCGGTACTGGATCTATATGAGCTATATAATTTGGTGATAGCACGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTATCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTCCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGCCGCTCCAGCTACGGCCAATATGAGGCCATGCACAGTCAGATGCCACTGacAAACATTTCGCGACCACCGTTACCTggtggcatgcaacaaatgtcGCCGCTGGCGCTGGTCACACACGCCGCCGCGGCGAACAATCAGCAGGCGcaggcagcagccgcagcagcagcagcacatcgTCGGCTGATGGGCGCACCGGCCTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAATATCTGCAGCTTATACAGGCcaagaaggagcagcagcagcaacaaattgttcCAGTTCTGGGCGCTACACATCcccaccagcaacaacagcagcagcaacaatcactGCATcatcaccaacaacagcagcaacaacaacaacagcagcagcaacagcagcagcagcagcgacagcgctCACAAAGTCCCGAGCTGAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGAACGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGGCACTTCAGCCGCCGCCAGCGAAACGTGTGGGCAGCGGCCTAATGCCGCCCGGTTTTCCCGCCAACTTTTACTTGAATCCCCACAATATGGCCGCTGTGGCAGCCGCAGCTGGTTTTCATCACCAGGCCGCGaacaatcatcatcatcagcagcagcagcaacagacgcagcagcaggacGCTACATCCGAGGGTGAACCAGAGGATGAGTATGGCAATGGGGAGCACAACACCACCGGCAACTCATCGTCGCTGCACGATGACAGTGAGCCACAGCAGTTGAATGGACACCACCtacaccatcatcatcatgaccATCACGATCTGCTTCATGACCATCATCATGAGCATCATCATTCTCATCAGAATCATCTGGACAAGTCAGATGACTCGGCCATTGAGAACTCACCCAGCACAtcgacaacaaccacaacaacatcatcatccaTATCCAAAGCGCATCGCCACAGCTCGCCGGTGTCCACAAAAAAGaagggcagcaacagcagcctcaacaacaacaacaacaacaacaacaaatcgcaGTCCTTGCTGTGCACGAAGGATGTAGGCAATGACAGCAACAGTGCCAGCGATGTCAAGCTGAATCCCCTCGAGACGCTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACgGCACCAATGCAAATGGCGAACAACAGCTGATTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCatccaagcagcagcagcagcagcggcagttacagcagcagccaagccAGAGGAGGGACAAGCTGAGCGGGATCAGACAGCGacgccagctgctgctgctgctgaggagGAGGCTACAGTGAGACGCAACAGCCTCGCTGAGGATGAGCTCAAGCATGAAAACAGCCAGAAACTTGGCCAGAACGAGGCAATTGATGAGGAAACAATGCAggaacatcaacaacagcaacagcagcaacaacaactcacaGATGACATTGTGAATGGAACGAGTGTTGGAATTGGAGgagttggtgttggtggtggagTGGGTGCAAGTCTGCTTAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MQLRVHPTMDCSGRSNNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQMSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISAAFPLPHNSVAAAAAAASFGHATNVNANPVPPASNGASYNGVPSVGHGAGAAVGVGNSAGTGAGGAGGNNAGVSNNNNNNNSNSNNNNNNNAGNGHPFSFASPTAPSSTKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTNISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGAPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQIVPVLGATHPHQQQQQQQQSLHHHQQQQQQQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETALQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQQQTQQQDATSEGEPEDEYGNGEHNTTGNSSSLHDDSEPQQLNGHHLHHHHHDHHDLLHDHHHEHHHSHQNHLDKSDDSAIENSPSTSTTTTTTSSSISKAHRHSSPVSTKKKGSNSSLNNNNNNNNKSQSLLCTKDVGNDSNSASDVKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAAIQAAAAAAAVTAAAKPEEGQAERDQTATPAAAAAEEEATVRRNSLAEDELKHENSQKLGQNEAIDEETMQEHQQQQQQQQQLTDDIVNGTSVGIGGVGVGGGVGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00543524; iTF_00566569; iTF_00573828; iTF_00558440; iTF_00521130; iTF_00497165; iTF_00560015; iTF_00597140; iTF_00496376; iTF_00609660; iTF_00513240; iTF_00615980; iTF_00582741; iTF_00552089; iTF_00521949; iTF_00619622; iTF_00524906;
- 90% Identity
- iTF_00573828;
- 80% Identity
- -