Dkam015845.2
Basic Information
- Insect
- Drosophila kambysellisi
- Gene Symbol
- retn
- Assembly
- GCA_035042185.1
- Location
- JAWNLS010001251.1:9465668-9485035[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.8e-26 9.8e-23 80.4 0.0 2 89 305 390 304 390 0.96 2 3 8.6 1.2e+04 -3.2 0.9 72 73 532 533 502 563 0.55 3 3 2.8 4e+03 -1.7 0.2 10 44 544 584 529 595 0.60
Sequence Information
- Coding Sequence
- ATGACCAAGTCATACCTGCGCTCATGCGAGTATCTCGTATCTCTCCAACTATACAATTCCCACGGTGATCGTACGGATGACGAGATGCGCGACTGTGATTCCGTTGACGGGGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCCCGGCTCAGTCACACAGTTGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgcCGCCGAATCATCCGCTCAACGCCCTCGGCAGCTTTATGAGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAACGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCAGCAGCGGCACATGCCGCAGCCTTTGGCGCCAACATGTTGCCCACAACGATCAGTACGGCGTTTCCGTTGCCCCACAATTCGGTGGCAgcggctgcggcagctgcatcTTTTGGCCATGCCACAAATGTGAATGCCAATCCGGTGCCGCCAGCCAGCAATGGCGCCAGCTACAATGGTGGACCCACAGGTGGACATGGAACAGGAGCAGCTGCTAGCGTTGGCAACAGTGGAGGCACAGGAGCAGCAGGTGCTGGAGGCAACATCGCTGGtgttaacaacagcaacaacagcaacaacaacaacaatagcaacaacaacaacaacaacaatgccggCAATGGTCATCCCTTTTCATTTGCATCGCCAACAGCGCCGAGCAGCACCAAAGAAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGAGAGGCACGCCCATCAATCGACTGCCCATAATGGCCAAATCGGTGCTGGATCTGTATGAGCTATATAATCTGGTGATAGCGCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGCCGCTCCAGCTACGGCCAATACGAGGCCATGCACAGTCAGATGCCACTGACAACAATTTCGCGACCATCGTTGCCTGGTGGCATGCAACAGATGTCGCCACTGGCGCTGGTCACACATGCTGCTGCCAACAATCAGCAGGCGCAGGCAgcggccgcagcagcagcagcacatcgACGGCTGATGGGCGGACCGGCCTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGGATGATGGAATATCTGCAGCTCATACAGGCgaagaaggagcagcagcagcagcaacagattgCGCCAGTTCTGGGCGCCACACATccacaccagcagcagcaacagcagcagcagcaacaacaatcgctgcatcatcaccaacaacaacaacaacaacaccagcagcagcagcagcgacagcgttCACAAAGTCCCGAGCTGAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTATCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCCGACTCACCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGAACGCGATCCGACGCCAGAACCAACGGATTTGGAGGAAACGGAACatcagccgccgccgccgaaaCGTGTAGGCAGCGGCCTAATGCCGCCCGGTTTTCCACCCAACTTTTACTTGAATCCCCACAATATGGCCGCTGTGGCAGCCGCAGCCGGCTTTCATCATCAGGCCGCcaacaatcatcatcatcagcagcagcaacattcgCAGCAGCAGGATGCAGCGTCTGAGGGTGAACCAGAGGATGAGTACGGCAATGGGGAGCACAACACCACCGGCAACTCATCGTCGCTGCATGATGACAGTGAGCCACAGCAGCTGAATGGACACCACCtccaccatcatcatcatgaccATCACGATCTGcatcatgatcatcatcatgagcatcatcatcatcagaatCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCGAGCACAtctacaacgacaacaacaacaacatcatccaCATCCAAAGCGAATCGTCACAGCTCGCCAGTGTCcacaaaaaagaagagcagcggcaactgcaacagcagcagcatcaccaacaacaacaagacgcAGTCCTTGTCGAGTGCGAAGGatgcaggcaacaacagcagcagtgccaGCGATGTCAAACTGAATCCTCTCGAGACGCTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGAACCAATGCAAATGGCGAACAGCAGTTGGTTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCacccaagcagcagcagctgttggagcaacagcagcaccagcagcccAGTCAGAGGCAGGACAAACTGAGCGGGAGCGGGCAGAGACGCCagacgccgctgctgctgaggaGCCAGCAGTGAGGAACAGCAGCATCGCTGAGGATGAGCTCAAGCATGATAACAGCCTGGAACTTGGCCAGAACGAGGCAATTGATGAGGAATCAAcgcaggaacaacaacaacagcaacaccaactgACAGATGACATTATGAATGGAGCGAGTGTTGTTGGTGCAGGAATTGGAGGGGTTGGTGTTGGGGTCGGTGGTGCAGTGGGTGCGGTGGGTGCAAGTCTGCTTAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MTKSYLRSCEYLVSLQLYNSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHNDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNSVAAAAAAASFGHATNVNANPVPPASNGASYNGGPTGGHGTGAAASVGNSGGTGAAGAGGNIAGVNNSNNSNNNNNSNNNNNNNAGNGHPFSFASPTAPSSTKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTTISRPSLPGGMQQMSPLALVTHAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQIAPVLGATHPHQQQQQQQQQQQSLHHHQQQQQQHQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETEHQPPPPKRVGSGLMPPGFPPNFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQHSQQQDAASEGEPEDEYGNGEHNTTGNSSSLHDDSEPQQLNGHHLHHHHHDHHDLHHDHHHEHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSTSKANRHSSPVSTKKKSSGNCNSSSITNNNKTQSLSSAKDAGNNSSSASDVKLNPLETLSLLSGMQFQVARNGTNANGEQQLVVNLELNGIKYSGVLVAATQAAAAVGATAAPAAQSEAGQTERERAETPDAAAAEEPAVRNSSIAEDELKHDNSLELGQNEAIDEESTQEQQQQQHQLTDDIMNGASVVGAGIGGVGVGVGGAVGAVGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00511055;
- 90% Identity
- iTF_00573828;
- 80% Identity
- -