Dgla004349.2
Basic Information
- Insect
- Drosophila glabriapex
- Gene Symbol
- retn_1
- Assembly
- GCA_035042305.1
- Location
- JAWNLN010000046.1:9535401-9554442[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-26 9.6e-23 80.3 0.0 2 89 378 463 377 463 0.96 2 2 3.7 5.5e+03 -2.3 0.1 20 41 621 651 601 664 0.53
Sequence Information
- Coding Sequence
- ATGAGCGGGGCCCGTGCCCGTGCTCGGTGCTCGGTGCTCGGTCCCATACCCATACCCATACCCATACCCAGACCCGGACCCGGACCCGGACCCATGACCAAGTCATACCTGCGCTCATGCGACTATCTCTCGTATCTCTCCAACTGTACAATGTGCAACACGGCGTTAACTGAACGCCTTTTGCAGTTGGAGCCAGCGCACTCAGACGTTGTCGGCATCAATACCACAATTATTGTTTGGGCCTGGTCAACATCGGCGAAACAGAAAAgaTCCCACGGTGATCGTACGGATGACGAGATGCGCGACTGTGATTCCGTTGACGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCCCGGCTCAGTCACACAGTTGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgccGCCGAATCATCCGCTCAACGCCCTCGGCAGCTTTATGAGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCAGCGGCGGCACATGCCGCAGCCTTTGGCGCCAACATGCTGCCCACAACGATCAGTACGGCCTTTCCGCTGCCGCACAATTCGGTGGCAgcggctgcggcagctgcatCCTTTGGCCATGCCACAAATGTGAATGCCAATCCGGTGCCGCCAGCCAGCAATGGCGCCAGCTACAATGGTGGACCCAGTGGTGGGCATGGAACAGTAGCACCTGCTAGCGTTGGCAGCAGTGGTGGCACAGGAGGACCAGGAGGTgctggcggcaacagcagtggtgttaacaacaacaacaacaatagcaacaacaacaacagcaataacggTGCCGGCAATGGTCATCCCTTTTCATTTGCATCGCCAACAGCGCCGAGCAGCACCAAAGAAGCGCGCCACTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGAtgatttgttttcgtttatgCAAAAGCGAGGCACGCCCATCAACCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATATAATCTGGTGATAGCGCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACAACAATTTCGCGACCACCGTTGCCTGGGGGCATGCAACAGATGTCGCCGTTGGCGCTGGTCACACACGCGGCGGCTGCGAACAATCAGCAGGCGCAGGCAGCggccgcagcggcagcagcacatCGACGGCTGATGGGCGGACCGGCCTTTGGCCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTCATACAGGCcaagaaggagcagcagcagcagcaacagaatgCGCCAGTTCTGGGCGCCACACATccccaccagcagcagcagcaacagcagcagcaacaatcgctgcatcatcaccaacaacaacaacagcagcagcagcagcgacagcgctCACAAAGCCCCGAGCTGAGCACGCGTGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCCGATTCGCCGCCaactttgaatttgaatcACATAAAACGGGAAAGGGAACGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGGCACTTCAGCCGCCGCCGTCGAAACGTGTGGGCAGCGGCCTAATGCCACCCGGTTTTCCCGCCAACTTTTACTTGAATCCCCACAATATGGCCGCTGTGGCAGCCGCCGCCGGTTTTCATCACCAGGCCGCcaacaatcatcatcatcatcagcaacagcagcagcagcagcaacagtcgcagcagcaggatACTGTGTCTGAGGGTGAACCAGAGGATGAGTATGGCAATGGGGAGCATAACACCACCGGCAACTCATCGTCGCTGCAAGATGAAAGTGAGCCACAGCAGCTGAATGGACACCACCtgcaccatcatcatcatgatcataACGATCTGCATCATGATCTGCATCAtgagcatcatcatcatgatcagAATCATCTGGACAAGTCGGACGACTCGGCCATTGAGAACTCACCCAGCAcatcgacaacgacaacaacaacaacatcatcatccacATCCAAATCGCATCGTCACAGCTCGCCGGTGTccacaaaaaagaagagcaccgtcaactgcaacagcaacagcagcaacaacaacaacaacaacaagacgcAGTCCTTGTCGTGTACGAAGGatgcaggcaacaacagcagcagcagcagtgccaacGATGCCAAACTGAATCCCCTCGAGACGCTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCAAATGGCGAGCAGCAGTTGATTGTCAATCTCGAACTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCAaccaggcagcagcagttgcagcagcagcagcagctgcagcagccaagcCAGAGGCAGGAGCAGGCACTGAGCGGCAGCAGGCAGAGAcgccaattgctgctgctgcggctgctgcggctgctgctgaggaGCCAGCAgtgaggagcagcagcaacagcagcactgaCGATGAGCTCAAGCATGACAACAGCCAGGAACTTGGCCAGAACGAGGCAACCGATGAGGAAACAacgcaggagcagcaacaacaacaacaacagcagcagcagcagcaacaacaactcacagATGAGATTGTGAATGGCGCAGGAATTGGGGGGGTTGGTGTTGGGGTCAGCGGTGCAGTGGGTGCAAGTCTGCTTAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MSGARARARCSVLGPIPIPIPIPRPGPGPGPMTKSYLRSCDYLSYLSNCTMCNTALTERLLQLEPAHSDVVGINTTIIVWAWSTSAKQKRSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNSVAAAAAAASFGHATNVNANPVPPASNGASYNGGPSGGHGTVAPASVGSSGGTGGPGGAGGNSSGVNNNNNNSNNNNSNNGAGNGHPFSFASPTAPSSTKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQNAPVLGATHPHQQQQQQQQQQSLHHHQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETALQPPPSKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHHQQQQQQQQQSQQQDTVSEGEPEDEYGNGEHNTTGNSSSLQDESEPQQLNGHHLHHHHHDHNDLHHDLHHEHHHHDQNHLDKSDDSAIENSPSTSTTTTTTTSSSTSKSHRHSSPVSTKKKSTVNCNSNSSNNNNNNKTQSLSCTKDAGNNSSSSSANDAKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAANQAAAVAAAAAAAAAKPEAGAGTERQQAETPIAAAAAAAAAAEEPAVRSSSNSSTDDELKHDNSQELGQNEATDEETTQEQQQQQQQQQQQQQQLTDEIVNGAGIGGVGVGVSGAVGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00511055;
- 90% Identity
- iTF_00573828;
- 80% Identity
- -