Dtri005432.1
Basic Information
- Insect
- Drosophila trichaetosa
- Gene Symbol
- retn
- Assembly
- GCA_035043205.1
- Location
- JAWNNE010000078.1:1509323-1535378[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-26 9.3e-23 80.4 0.0 2 89 313 398 312 398 0.96 2 2 3.2 4.3e+03 -1.8 0.2 14 14 548 548 512 597 0.56
Sequence Information
- Coding Sequence
- ATGCAACTCCGAGTGCATCCGAATATGGATTGTAGCGGCcgttcaaataataatattgagcGCGATTCCGATTTGGGTGACGATTTGTCCCACGGTGATCGTACGGATGACGAGATGCGCGACTGCGATTCCGTTGACGGGGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCCCGGCTCAGTCACACAGTTGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgccGCCGAATCATCCGCTTAACGCCCTCGGCAGCTTTATGAGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCAGCGGCAGCACATGCCGCAGCCTTTGGCGCCAACATGCTGCCCACAACGATCAGTACGGCCTTTCCGCTGCCGCACAATTCGGTGGCAGtggctgcggcagctgcatcCTTTGGCCATGCCACAAATGTGAATGCCAATCCCGTGCCGCCAGCCAGCAATGGCGCCAGCTACAATGGTGGCCCCAGTGGTGGACAtgcaacaggagcagctgctAGCATTGGCAACAGTGGAGGCGCAGGAGCAGGAGGTGCTGGAGGCAACAGCAGTGgtgttaacaacaacaacaacaacaatagcaacaacaacaacaataacaacaacaatgctggcAATGGTCATCCCTTTTCATTTGCATCGCCAACAGCGCCGAGCAGCACCAAAGAAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATgatttgttttcgtttatgCAAAAGCGAGGCACGCCCATCAACCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATATAATCTGGTGATAGCACGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAGCCAGATGCCACTGACAACAATTTCGCGACCACCGTTGCCTGGGGGCATGCAACAGATGTCGCCACTGGCGCTGGTCACACATGCCGCGGCTGCGAACAATCAGCAGGCGCAGGCAgcggccgcagcagcagcagcacatcgaCGGCTGATGGGCGGGCCCGCCTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAACCGTATGATGGAATATCTGCAGCTTATACAGGCgaagaaggagcagcagcagcagcaacagattgCGCCAATTCTGGGCGCCACACATccccaccagcaacagcagcagcagcaacaatcgctgcatcatcaccaacaacaacaacaacaacagcagcagcagcgacagcgctCACAAAGTCCCGAACTGAGCACACGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGcGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGATCGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAGCGGCCCATCAGCCGCCACCGGCGAAACGTGTGGGCAGCGGCCTAATGCCGCCCGGATTTCCCGCCAACTTTTACTTGAATCCCCACAATATGGccgctgtggcagcagcagccggttTTCATCACCAGGCCGCcaacaatcatcatcatcagcagcagcaacagtcgcagcagcaggatgCAGCGTCTGAGGGTGAACCAGAGGATGAGTATGGAAATGGGGAGCACAATACCACCGGCAACTCATCGTCGCTGCATGATGACAGTGAGCCACAGCAGCTGAATGGACACCACCtccaccatcatcatcatgaccATCACGATCTGCATCATGATCTTCATCAtgagcatcatcatcatcagaatCATCTGGACAAGTCGGATGATTCGGCCATTGAGAATTCACCCAGCAcatcgacaacgacaacaacaacaacatcatccaCATCCAAAGCACATCGTCACAGCTCGCCGGTGTccacaaaaaagaagagcagcggcaactgcaacaacagcagcagcaccaccaccaacaacaagacgCAGTCCTTGTCGTGTGCGAAGGAAGCaggcaataacagcagcaacgccaacaGTTCCAGCGATGTCAAACTGAATCCCCTCGAGACGCTCAGTCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCTAATGGAGAGCAGCAGTTGATTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCACCCAAGCAGCGGCAGTTGCAGCATCCAAGTTAGAGGCAGGTCAAACTGAGCGGGAGCAGGCAGAgacgccagctgctgctgctgaggagCCAGCAGTGAGGAACAGCAGCATCACTGAGGATGAGCTCAAGCATGAAAACAGCCAGGAACTTGGCCAGAACGAGGCAATTGATGAGGAAACAAcgcaggaacaacaacaacaacaacagcaacaacaactcacagATGACATTGTGAATGGAGCGAGTGCTGTTGGGGCGGGAATTGGAGGGGTTGGCGTTGGGGGTGCAAGTCTGCTGAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MQLRVHPNMDCSGRSNNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNSVAVAAAAASFGHATNVNANPVPPASNGASYNGGPSGGHATGAAASIGNSGGAGAGGAGGNSSGVNNNNNNNSNNNNNNNNNAGNGHPFSFASPTAPSSTKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQIAPILGATHPHQQQQQQQQSLHHHQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERDRDPTPEPTDLEEAAHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQQSQQQDAASEGEPEDEYGNGEHNTTGNSSSLHDDSEPQQLNGHHLHHHHHDHHDLHHDLHHEHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSTSKAHRHSSPVSTKKKSSGNCNNSSSTTTNNKTQSLSCAKEAGNNSSNANSSSDVKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAATQAAAVAASKLEAGQTEREQAETPAAAAEEPAVRNSSITEDELKHENSQELGQNEAIDEETTQEQQQQQQQQQLTDDIVNGASAVGAGIGGVGVGGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00511055;
- 90% Identity
- iTF_00573828;
- 80% Identity
- -