Dinf015141.1
Basic Information
- Insect
- Drosophila infuscata
- Gene Symbol
- retn
- Assembly
- GCA_035042205.1
- Location
- JAWNLR010000721.1:270702-289002[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.1e-26 1.1e-22 80.3 0.0 2 89 349 434 348 434 0.96 2 3 7.5 1.3e+04 -3.3 0.2 52 73 552 577 546 588 0.50 3 3 2.5 4.5e+03 -1.8 0.3 10 44 588 628 573 639 0.60
Sequence Information
- Coding Sequence
- ATGGGCCAATATGAGCCACGTTATAGCCACAAAGAAGATGAAGTCGCAGACGAggctgcggctgtggctggGGCAGGGACAGGggcggaggcggaggctgCTGCCACTAAAAACGAGGCAAGAGCGTTGACGTTACCATTTCATTATGCGCAATCGCGTCTGCGACCGCGTTTAGACCTACTCGGAATAAGAGTTGACTCCCACGGTGATCGTACGGATGACGAGATGCGCGACTGTGATTCCGTTGACGGGGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCCCGGCTCAGTCACACAGTTGCCGGCGGCGCTGGTCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgcCGCCGAATCATCCGCTCAACGCCCTCGGCAGCTTTATGAGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCAGCAGCGGCACATGCCGCAGCCTTTGGCGCCAACATGCTGCCCACAACGATCAGTACGGCGTTTCCGTTGCCCCACAATTCGGTTGCAgcggctgcggcagctgcatcTTTTGGCCATGCCACAAATGTAAATGCCAATCCGGTGCCGCCAGCCAGCAATGGCGCCAGCTACAATGGTGGACCCACAGGTGGACATGGAACAGGAGCAGCTGCTAGCGTTGGCAACAGTGGAGGTACAGGAGCAGCAGGTGTTGGAGGCAACATCGCTGGtgttaacaacagcaacaacaacaacagcagcaacaacaacaacaacaacaatgccggCAATGGTCATCCCTTTTCATTTGCATCGCCAACAGCGCCGAGCAGCACCAAAGAAGCTAATTCCGCATCAAATTCATCGACGTCCAGTGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGAGAGGCACGCCCATCAATCGACTGCCCATAATGGCCAAATCGGTGCTGGATCTGTATGAGCTATATAATCTGGTGATAGCGCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGGAATCGTCGCGAAGGACGCCGGTCCAGCTACGGCCAATACGAGGCCATGCACAGTCAGATGCCACTGACAACAATTTCGCGACCATCGTTGCCTGGTGGCATGCAACAGATGTCGCCACTGGCGCTGGTCACACATGCTGCTGCCAACAATCAGCAGGCGCAGGCAgcggccgcagcagcagcagcacatcgACGGCTGATGGGCGGACCGGCCTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGGATGATGGAATATCTGCAGCTCATACAGGCgaagaaggagcagcagcagcagcaacagattgCGCCAGTTCTTGGCGCCACACATccacaccagcagcagcaacagcagcagcagcaacaacaatcgctgcatcatcaccaacaacaacaacaacaacaccagcagcagcagcagcgacagcgctCACAAAGTCCCGAGCTGAGCACGCGCGATGCGCTCAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCTGACTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGAACGCGATCCGACGCCAGAACCAACGGATTTGGAGGAAACGGAACATCAGCCACCGCCACCGAAACGCGTAGGCAGCGGCCTAATGCCACCCGGTTTTCCACCCAACTTTTACTTGAATCCCCACAATATGGCCGCTGTGGCAGCCGCAGCCGGCTTTCATCATCAGGCCGccaacaatcatcatcatcagcagcagcaacattcgCAGCAGCAGGATGCAGCGTCTGAGGGTGAACCAGAGGATGAGTATGGCAATGGGGAGCACAACACCACCGGCAACTCATCGTCGCTGCATGATGATAGTGAGCCACAGCAGCTGAATGGACACCACCtccaccatcatcatcatgaccATCACGATCTGCATCATGATCTTCATCAtgagcatcatcatcatcagaatCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCGAGCACatcgacaacgacaacaacaacatcatcatccacATCCAAAGCGAATCGTCACAGCTCGCCAGTGTCCACAAAAAAGAAGAGcagcggcaactgcaacagcagcagcatcaccaacaacaacaagacgcAGTCCTTGTCGAGTGCGAAGGATGCAggcaagaacagcagcagtgccAGCGATGTCAAACTGAATCCTCTCGAGACGCTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGAACCAATGCAAATGGCGAACAGCAGTTGATTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCacccaagcagcagcagctgttggagCAACAGCCGTACCAGCAGCCAGGTCAGAGGCAGGACAAACTGAGCGGGAGCAGGCAGAGACGCCAGACGCCGCTACTGCTGAGGAGCCAGCAGTGAGGAACAGCAGCATCACTGAGGATGAGCTCAAGCATGAAAACAGCCTGGAACATGGCCAGAACGAGGCAATTGATGAGGAATCAAcgcaggaacaacaacaacagcaacaccaactgACAGATGACATTTTGAATGGAGCGAGTGTTGTTGGTGCAGGAATTGGAGGGGTTGGTGTTGGGGTCGGTGGTGCAGTGGGTGCGGTGGGTGCAAGTCTGCTTAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MGQYEPRYSHKEDEVADEAAAVAGAGTGAEAEAAATKNEARALTLPFHYAQSRLRPRLDLLGIRVDSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNSVAAAAAAASFGHATNVNANPVPPASNGASYNGGPTGGHGTGAAASVGNSGGTGAAGVGGNIAGVNNSNNNNSSNNNNNNNAGNGHPFSFASPTAPSSTKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTTISRPSLPGGMQQMSPLALVTHAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQIAPVLGATHPHQQQQQQQQQQQSLHHHQQQQQQHQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETEHQPPPPKRVGSGLMPPGFPPNFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQHSQQQDAASEGEPEDEYGNGEHNTTGNSSSLHDDSEPQQLNGHHLHHHHHDHHDLHHDLHHEHHHHQNHLDKSDDSAIENSPSTSTTTTTTSSSTSKANRHSSPVSTKKKSSGNCNSSSITNNNKTQSLSSAKDAGKNSSSASDVKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAATQAAAAVGATAVPAARSEAGQTEREQAETPDAATAEEPAVRNSSITEDELKHENSLEHGQNEAIDEESTQEQQQQQHQLTDDILNGASVVGAGIGGVGVGVGGAVGAVGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00511055;
- 90% Identity
- iTF_00573828;
- 80% Identity
- -