Dvil013085.1
Basic Information
- Insect
- Drosophila villosipedis
- Gene Symbol
- retn
- Assembly
- GCA_035043025.1
- Location
- JAWNNF010000032.1:9505487-9532285[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-26 8.6e-23 80.4 0.0 2 89 306 391 305 391 0.96 2 2 4.2 5.7e+03 -2.3 0.1 20 41 550 578 528 591 0.53
Sequence Information
- Coding Sequence
- ATGGATTGTAGCGGCcgttcaaataataatattgagcGCGATTCCGATTTGGGTGACGATTTgTCCCACGGTGATCGTACGGATGACGAGATGCGCGACTGTGATTCCGTTGACGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCCCGGCTCAGTCACACAGTTGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgccGCCAAATCATCCGCTCAACGCCCTGGGCAGCTTTATGAGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCAGCGGCGGCACATGCCGCAGCCTTTGGCGCCAACATGCTGCCCACAACGATCAGTACGGCCTTTCCGCTGCCGCACAATTCGGTGGCAgcggctgcggcagctgcatcCTTTGGCCATGCCACAAATGTGAATGCCAATCCGGTGCCGCCAGCCAGCAATGGCGCCAGCTACAATGGTGGACCCAGTGGTGGACATGGAACTGGAGCACCTGCTAGCGTTGGCAACAGTGGTGGCACAGGACCAGGAGGTgctggcggcaacagcagtggtgttaacaacaacaacaacaataacaacaataacaatagcaacaacaacaataacggtGCCGGCAATGGTCATCCCTTTTCATTTGCATCGCCAACAGCGCCGAGCAGCACCAAAGAAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGAGGCACGCCCATCAACCGCCTGCCCATAATGGCCAAATCGGTCCTGGATCTATATGAGCTATATAATCTGGTGATAGCGCGCGGCGGCCTCGTCGACGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTACCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACAACAATTTCCCGACCACCGTTGCCTGGGGGCATGCAACAGATGTCGCCGTTGGCGCTGGTCACACACGCGGCAGCTGCGAACAATCAGCAGGCGCAGGCAgcggccgcagcagcagcagcacatcgACGGCTGATGGGCGGACCGGCCTTTGGCCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAGTATCTGCACCTCATACAGGCcaagaaggagcagcagcagcagcaacagaatgCACCAGTTCTGGGCGCCACACATccccaccagcagcagcagcagcaacaacagtcgctgcatcatcaccaacaacaacagcaacagcagcagcagcagcgacagcgctCACAAAGCCCCGAGCTGAGCACACGTGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGcGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGAACGTGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGGCACTTCAGCCGCCGCCGGCGAAACGTGTGGGCAGCGGTCTAATGCCGCCCGGTTTTCCCGCCAACTTTTACTTGAATCCCCACAATATGGCCGCTGTGGCAGCCGCCGCCGGTTTTCATCACCAGGCCGCcagcaatcatcatcatcatcagcaacagcagcagcagcagcaacagtcgcagcagcaggatGCTGTGTCTGAGGGTGAACCAGAGGATGAGTATGGCAATGGGGAACATAACACCACCGGCAACTCATCGTCGCTGCAAGATGAAAGTGAGCCACAGCAGCTGAATGGACACCACCTGCACCATCGTCATCATGATCATAACGATCTGCATCATGATCTGCATCAtgagcatcatcatcatcatcagaatCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCAcatcgacaacgacaacaacaacaacatcatcatccacATCCAAATCGCATCGTCACAGCTCGCCGGTGTccacaaaaaagaagagcaactgcaacagcaacagtagcagcaacaacaacaacaacaagacgcAGTCCTTGTCGTGTACGAAGGAtgccggcaacaacagcagcagcagcagtgtcaGCGATGCCAAGCTGAATCCCCTCGAGACGCTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCAAATGGCGAGCAGCAGTTGATTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCAAccaagcagcagttgcagcagcagatgcagcagccAAGTCAGAGGCAGGAGCTGGCACTGAGCGGCAGCAGGCAGAGACgccaattgctgctgctgctgctgaggagCCAGCAgtgaggagcagcagcaacagcagcactgaCGATGAGCTCAAGCATGAAAACAGCCAGGAACTTGGCCAGAACGAGGCAACCGATGAGGAAATAAcgcaagaacagcaacaacaacagcagcaacaacaactcacaGATGAGATGGTGAATGGTGCTGGAATTGGGGGGGTTGGTATTGGTGTCAGCGGTGCAGTGGGTGCAAGTCTGCTTAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MDCSGRSNNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNSVAAAAAAASFGHATNVNANPVPPASNGASYNGGPSGGHGTGAPASVGNSGGTGPGGAGGNSSGVNNNNNNNNNNNSNNNNNGAGNGHPFSFASPTAPSSTKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLHLIQAKKEQQQQQQNAPVLGATHPHQQQQQQQQSLHHHQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETALQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAASNHHHHQQQQQQQQQSQQQDAVSEGEPEDEYGNGEHNTTGNSSSLQDESEPQQLNGHHLHHRHHDHNDLHHDLHHEHHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSSTSKSHRHSSPVSTKKKSNCNSNSSSNNNNNKTQSLSCTKDAGNNSSSSSVSDAKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAANQAAVAAADAAAKSEAGAGTERQQAETPIAAAAAEEPAVRSSSNSSTDDELKHENSQELGQNEATDEEITQEQQQQQQQQQLTDEMVNGAGIGGVGIGVSGAVGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00511055;
- 90% Identity
- iTF_00573828;
- 80% Identity
- -