Dpul009806.2
Basic Information
- Insect
- Drosophila pullipes
- Gene Symbol
- retn
- Assembly
- GCA_035043795.1
- Location
- JAWNMT010000643.1:4540720-4567798[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-26 8.8e-23 80.4 0.0 2 89 317 402 316 402 0.96 2 2 3 4.5e+03 -2.0 0.1 11 44 550 591 540 601 0.55
Sequence Information
- Coding Sequence
- ATGCAACTCCGAGTGCATCCGACTATGGATTGTAGCGGCcgttcaaataataatattgagcGCGATTCCGATTTGGGTGACGATTTGTCCCACGGTGATCGTACGGATGACGAGATGCGCGACTGTGATTCCGTTGACGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCCCGGCTCAGTCACACAGTTGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgccGCCGAATCATCCGCTCAACGCCCTGGGCAGCTTTATGAGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCAGCGGCGGCACATGCCGCAGCCTTTGGCGCCAACATGCTGCCCACAACGATCAGTACGGCCTTTCCGCTGCCGCACAATTCGGTGGCAgcggctgcggcagctgcatcCTTTGGCCATGCCACAAATGTGAATGCCAATCCGGTGCCGACAGCCAGCAATGGCGCCAGCTACAATGGTGGGCCCAGCGGTGGACATGGAACAGGAGCACCTGCTAGCGTTGGCAACAGTGGTGGCACAGGAGCAGGAGGTgctggcggcaacagcagtggtgttaacaacaacaacaacaataacaatagcaacaacaacaataataacggTTCCGGCAATGGTCATCCCTTTTCATTTGCATCGCCAACAGCGCCGAGCAGCACCAAAGAAGCGCGCCACTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATgatttgttttcgtttatGCAAAAGCGAGGCACGCCCATCAACCGCCTACCCATAATGGCCAAATCGGTGCTGGATCTGTATGAGCTATATAATCTGGTGATAGCACGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACAACAATTTCGCGACCACCGTTGCCTGGGGGCATGCAACAGATGTCGCCGTTGGCGCTGGTCACACACGCGGCGGCTGCGAACAATCAGCAGGCACAGGCAGCggccgcagctgcagcagcacatcgACGGCTGATGGGCGGACCGGCCTTTGGCCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTCATACAGGCcaagaaggagcagcagcagcagcaacagaatgCGCCAGTTCTGGGCGCCACACATccccaccagcagcagcagcagcagcaacaacaatcgctgcatcatcaccaacaacaacaacaacagcagcagcgacagcgctCACAAAGCCCCGAGCTGAGCACACGTGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGcGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGAACGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGGCACTTCAGCCGCCGCCGGCGAAACGTGTGGGCAGTGGCCTAATGCCGCCCGGTTTTCCCGCTAACTTTTACTTGAATCCCCACAATATGGCCGCTGTGGCAGCCGCCGCCGGTTTTCATCACCAGGCCGCcaacaatcatcatcatcatcagcagcagcagcagcaacagcagcaacagtcgcagcagcaggatGCTGTGTCTGAGGGTGAACCAGAGGATGAGTATGGCAATGGGGAGCATAACACCACCGGCAACTCATCGTCGCTGCAAGATGAAAGTGAGCCACAGCAGCTGAATGGACACCACCtgcaccatcatcatcatgatcataACGATCTGCATCATGATCTGCATCAtgagcatcatcatcatcatcagaatCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCAcatcgacaacgacaacaacaacaacatcatcatccacATCCAAATCGCATCGTCACAGCTCGCCGGTGTccacaaaaaagaagagcagcgccaactgcaacagcagcagcaacaacagcaacaacaacaacaacaacagcaacaagacaCAGTCCTTGTCATGTGCGAAGGatgcaggcaacaacaacaacagcagcagcagcagcagtgccaacGATACCAAACTGAATCCCCTCGAGACGCTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCAAATGGCGAGCAGCAGTTGATTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCcaaccaagcagcagcagctgcagcagcagcagccaagccAGAAACAGGAGCAGGCACTGAGCGGCAGCAGGCAGAGACgccaattgctgctgctgcggctgctgctgaggaGCCAGCAgtgaggagcagcagcagcagcagcagcattgatGATGAGCTCAAGCATGAAAACAGCCAGGAACTTGGCCAGAACGAGGCAACCGATGAGGAAACAatgcaagaacagcaacaacaacaacagcaacaactcacAGATGAGATTGTGAATGGTGCAGGAATTGGGGGGGTTGGTGTCGGGGTCAGCGGTGCAGTGGGTGCAAGTCTGCTTAAGGAAGCTGTGGCCAGTTCATAG
- Protein Sequence
- MQLRVHPTMDCSGRSNNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNSVAAAAAAASFGHATNVNANPVPTASNGASYNGGPSGGHGTGAPASVGNSGGTGAGGAGGNSSGVNNNNNNNNSNNNNNNGSGNGHPFSFASPTAPSSTKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQNAPVLGATHPHQQQQQQQQQSLHHHQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETALQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHHQQQQQQQQQQSQQQDAVSEGEPEDEYGNGEHNTTGNSSSLQDESEPQQLNGHHLHHHHHDHNDLHHDLHHEHHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSSTSKSHRHSSPVSTKKKSSANCNSSSNNSNNNNNNSNKTQSLSCAKDAGNNNNSSSSSSANDTKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAANQAAAAAAAAAKPETGAGTERQQAETPIAAAAAAAEEPAVRSSSSSSSIDDELKHENSQELGQNEATDEETMQEQQQQQQQQLTDEIVNGAGIGGVGVGVSGAVGASLLKEAVASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00511055;
- 90% Identity
- iTF_00573828;
- 80% Identity
- -