Basic Information

Gene Symbol
Kdm5
Assembly
GCA_004143845.1
Location
SCDZ01000005.1:711346-718147[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-26 7.4e-23 81.0 0.1 2 89 242 325 241 325 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAAGCCGAGGCGGACAATCTAGCCGCCAGCGCCACAGGCGGCGGCACTGGAGGCGCCAACAGTAACTCCAATGGCACCGTAACACCAGCACGGCGCTTGCGCACGCGTAATTCAACCGGCAGCGGAAGCGAGTCGGCCAAAAAGAATACCAACAACAGTAGCtacagtaataataataacaacaacaacaataataataataacaacaataacgagtCAGCTGCGACCGGCAATGATGgaccaccagcaacaacaggaacaatgTCAGCATCAGGTGGCGGTGGAGCTGCCTCTGctacagcaacaccaacaatacCGGTGGAGCGTCCCATGCCCAGCGTGCCGATGAATCATGCCAGCAGCAGTGTATCGGCCAGCAAGAAATATCACAACAGCTGTCCGCATCCAACACCCACGGTGCACAAGAAGTCGCTGCACACGAAGCCGCATAGCAGCAATAAATTCGATCAGGGCAAGAACGAGGAATTCCATTTTGATACGCCGCCCGAGTGTCCAGTGTTTCGGCCGACAGCGGAGGAGTTTAAAAATCCTTTGGCGTACATTAGCAAGATACGCTCTATAGCTGAGAAATGTGGCATTGCCAAGATATTGCCGCCGGAGAAGTGGTCACCGCCATTTGCCGTCGATGTGGACAAGTTGCGCTTTGTGCCGCGCGTGCAGCGTCTCAACGAACTGGAGGCCAAGACGCGCGTCAAGTTGAATTTTTTGGATCAGATCGCTAAGTTCTGGGAGCTGCAAGGCTCCTCACTTAAAATCCCGATGGTTGAGCGCAAGGCTCTCGATCTATATACGCTGCATCGCATTGTCCACGAGGAGGGCGGCATGGAGCAGACAACCAAGGAGCGCAAATGGGCCAAGGTTGCCAATCGCATGCAGTATCCATCTAGCAAAAGTGTTGGCGCCACACTCAAAGCCCACTACGAGCGCATACTTCATCCCTTTGAGGTGTACACCTCTGGCAAGGTATTGGGGCCTGGCgcggcttcggcttcggcaGTTGCTACACCCGTCAAGCTCGAGGATGTCGGCACCGATTACAAGGCCCACGAAATACCCACGCGTCAGCAAATCGCGCCGcctaatgaaaataatacgCGTCGCTCAAAGCGATTTGGCAACTCTACGGCCAGCTGCGGCTTGAATAGCGTAACCAAACCAGGCGCCGCTGGCATCACCATCAAAACGGAAACTAAGGAGGACTTCAAACGCGATCTTTTGAGTAGCTTCAATGCGGTCAATATTGCTGGgtctggtggtgctgctgctaatgccgGTCAGTCGGGCAACTGTGGTGGTGCACCTGCACCGAATACACGCGCCACCCAGAAGAAGGCCAGctcggagcagcagcaaccgcttATCGATCCACTAATGAAGTACATCTGTCATATCTGCAATCGCGGCGATGTCGAAGAGTCAATGCTGTTGTGTGACGGCTGCGACGACAGCTATCATACTTTCTGCCTACTACCACCATTGAGCAGCATACCCAAAGGTGAATGGCTGTGCCCCCGTTGCGTTGTTGAGGAGGTGAGCAAGCCACAGGAGGCTTTTGGTTTCGAGCAGGCGGAACGTGAGTACACATTGCAGCAGTTTGGTCAGATGGCCGATCAGTTTAAGCAGGAATACTTTCGCAAGCCGGTGCACTTGGTGCCCACGGAGATGGTTGAGCGCGAATTTTGGCGTATTGTCTCCTCGATTGATGAGGATGTGACTGTTGAATATGGCGCCGATTTGCATACAATGGATCATGGCTCTGGTTTTCCAACGAAGAGCTCACATTATTTGCTGCCCGGTGATCAGGAGTATGCCGAGTCTAGCTGGAATTTGAACAATCTCCCGTTGCTGGAGGACTCAATACTGGGACATATTAATGCTGATATTAGCGGCATGAATGCGCCGTGGATGTATGTGGGCATGTGCTTTGCTGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCAATTAACTATTTGCATTGGGGCGAGCCAAAGACCTGGTACGGCGTGCCCGGCTCCTGTGCCGAGCAGTTTGAGGAAACCATGAAGCGTGCCGCGCCCGAGCTGTTCTCTTCGCAGCCCGATTTGCTCCATCAACTGGTGACCATAATGAACCCCAACATATTGATGAATAATGGTGTGCCCGTGTTTCGCACCGATCAGCATGCCGGCGAATTTGTTATCACATTTCCGCGCGCCTATCACGCCGGCTTCAATCAAGGCTATAACTTCGCCGAAGCAGTCAATTTTGCGCCCGCCGATTGGCTAAAGATGGGACGCGAATGCGTCAATCATTACTCGATGCTGCGTCGCTTCTGTGTCTTCTCGCACGACGAGCTGGTCTGTAAGATGGCCTTAGAGCCGGCCAAGCTGACCTTTGGCATTGCCACTGCTTGCTATATCGACATGGCCGAAATGGTGGACACAGAAAAGAAGCTGCGCAAATCCCTGCTAGAATGGGGCGTCACGCGCGCCGAACGTCGCGCTTTCGAGCTGGTCAACGACGATGAACGCCATTGCCAGGAGTGCAACACCACCTGCTTCCTATCGGCAGTTGCCTGTGAGTGCAATGATAAGCTAATTGTCTGTCTGCGCCACTACACCGTGCTCTGCGGTTGTGCACCCGAGAAGCACACACTCATCTATCGCTATACCCTGGACGAGATGCCGTTGATGCTGCAAAAGCTAAAGGTGAAGGCGCATAGTTTTGAGCGTTGGCTCTCGCGTTGTCGCGACATTGTCGACGCTCACACGCCCACATCGGTGACGCTGTCCGAGCTGCAGGAGCTCTGCAAGGAGGCGGAGACCAAAAAGTTTCCCTCATCCCTGCTCATAGATCGCCTAAATGCGGCAGCCATCGAGGCGGAAAAATGCGTCACGGTCATACAACAGCTGGGCATCAATAAGgTGCGTACCCGCTCTGATCATAACCAGGAGGCAGCTCAGTATAAGCTGACAAtggaggagctggagctgttTGTGCAGGAAATCGACAATCTGTGCTGCATCATCGATGAGGGCGCCTCGGTGCGCGAGTTGTTGGTGCTGGGCAGGCAATTTGTGGAACGCGCAGAGTCGCAGCTGGAGCTAACGCTGGAGGCGCTCGAGGAGAGCGATCTGGAGACGCTCATTAATGAGGGCAGCTCATTACGCAtagagctgcagcagctggatcAGCTGCAGAAGCGACTCAAGCAGTGTAAATGGTACAAACGCTCCCAGGGCCTGCGCGAGACCAGCTCCAAGCTGACCTACAATGATGTCAAGTCGCTGCTGCACATGGCAGCCGCTGATCTGGATCCAACCGATCCCTTTGTGGATCGCGAAATGCGCAAGCTCCAGCACATTGGCGCCGCCATCGAAGCATGGGAGTTGCAGGCTAGCAACTATTTTCGACGACTTAACCAGCAGCACGAGCTGGTCGAAATTGAGCAGTTTCTTAAGTCAGCCAGCGACATCAATGGGCAAGTGCCGTCGCATGGCCTGCTGAAGGATGCGCTGCGAAAGGCACGCGAATGGCTGCGCGCTgtggagcaactgcagcagaaTAATCATGTCACCTACTGTCACACACTGGAGGCAATGATTGAACGTGGCCTCAATATACCCATACAGCTGGAGGAGCTGGGTCGCATGCAGGGCCATTTGAATAGTGCACATCAATGGAAGGATAATACGGCGCGTGCGTTCCTAAAGAAGGGCACATTCTATACGCTGCTGGAGGTTCTAATGCCGCGCGCCGATGCCATTAACATTGACTCGGATCTCAAGCCGCGTTTCAAAGACGATTTCCTCAAGGACAAGAATCCCGCCGAAATTGTGGCCAGCTTTAAGCATGCCGAGGAGCAGGAACTGCGCGATATGCGCGACCTTAGGCGCCAGAATATGGCCAAGAATCCGTTACGTGACGTCTTCTGCCTATGCAAGTCGGAGTTCCGTGCTCTGATGCACAATTGTCAGCTGTGCCGGGATTGGTTTCACGACGACTGCGTGCCACCGCCCGGCTCCAATCAGATGCTAATTGTGCAACAGAACGGCAACGGTGGCGGTGCATTAAATGGTGGTGGATCGATGCCGGCGCAAGCCAAGTGGCTGTGCCCGAGCTGTGTGCGCTCGAAGCGGCCGCGATTGGAGACCATTTTGCCGCTGCTcgtgcagctgcaacagctgccgaTTCGACTACCTGAGGATGAGGCGTTGCGTTGCCTGGCGGAGCGTGCCATGAACTGGCAGGATCGTGCACGCAAAGCGCTCAGTAGTCCCGATGTCAGCGCTGCTCTGGATGCCATTTTGGCCCAACAGCAAAAGCGACGGTCGgagagcagcagctgtgccGCCGTCCTGGGCAACATAAGTAGTCCAAGGAAGCCGCGACGTTCGCACAACCTGTCCAAGCAGGAATCCAACAATACGGCCCGCTCCGAGTCAGATAATGAGGACGGTGACGATGTggatgatgacgacgatgatgatgaatgCCGGCTGCGCATTGTGGAGGATGGGTATAGCAATGACGAGGACGAGCAGCTGCCGCGCCTGGCGCTAAACAATGCACAGGCCAGCAACTGCATCAGCACTGATCTCTTGAAGCTGCTCTCCGACAGCGAAATCGAGAATCTGCTAGAGCTTATGATGGAGGGGGATTTGCTGGAGGTGTCGCTGGATGAGACGCAAGAGCTATGGCGCATACTGGAAACATTACCGCCCTCAATGCTGCAGGCCGAGGCCAAGGCGCGTGTGGcgcagcatttgcagcagcatcgtcaacagctgcagcaaaatcAGGCGACACCAGCTACGGTCGCCTCCTCGTCCAGCATACACAGCGGCGCTGAGGATTCCAATGATAGCCTGCTCGTGCAAAATAGTCCAAGTCCCGGCGCTGGCAGCGGTGGCGGCGCACAGACGGTGCGCAATAAGAAGCGACGGTCCAATGACGCCAGCAGCGCCAATGTGGCTGTGCCGCGCAAGAAGCAGAATACGCCCAAGCAAACACCAGGCAAAAAGTCGCAAGCGGTGCGCAAAAGTGACAGCAAGGCGAGCAGCTCGCCCGGCGTTGATGCCGATGCGGAGAACAAGCAGGCGAACGGTGGCAatacgacgacaacaacaccaaccaCGCCGGGCACACCAGCAaatgtggcagctgccacgGCAGCTGGCACGCCTACACCGGCAGGTGGTGGAggtggaggcggcggcggaggaggaggaggcggtgGTCAAAAGAAGCATGCGCAGCGCACACAGCAAACTGCGCaggaggacgacgaggaggaaTGCCGTGCAGAGAATTGCCATAAGCCCACCGGACGTGAGGTGGACTGGGTGCAGTGCGACGGTGGCTGCAACGAATGGTTTCACATGTACTGTGTGGGCCTGAATCGCAGTCAGATTAAGGCCGACGATGATTACATATGCATACGTTGCTCCAAGACAGTcagcgtgggcgtggccggtgGCAGCGCCAGTCTAACGGTGACCGCGACTACCACCAGCAGCCTGACGCTGAGCACAGCGACGCCGGGaaagcagcgagcagcgcagTCGGCGCGGTAG
Protein Sequence
MSAKAEADNLAASATGGGTGGANSNSNGTVTPARRLRTRNSTGSGSESAKKNTNNSSYSNNNNNNNNNNNNNNNESAATGNDGPPATTGTMSASGGGGAASATATPTIPVERPMPSVPMNHASSSVSASKKYHNSCPHPTPTVHKKSLHTKPHSSNKFDQGKNEEFHFDTPPECPVFRPTAEEFKNPLAYISKIRSIAEKCGIAKILPPEKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVHEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPGAASASAVATPVKLEDVGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSTASCGLNSVTKPGAAGITIKTETKEDFKRDLLSSFNAVNIAGSGGAAANAGQSGNCGGAPAPNTRATQKKASSEQQQPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERAESQLELTLEALEESDLETLINEGSSLRIELQQLDQLQKRLKQCKWYKRSQGLRETSSKLTYNDVKSLLHMAAADLDPTDPFVDREMRKLQHIGAAIEAWELQASNYFRRLNQQHELVEIEQFLKSASDINGQVPSHGLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIQLEELGRMQGHLNSAHQWKDNTARAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFKDDFLKDKNPAEIVASFKHAEEQELRDMRDLRRQNMAKNPLRDVFCLCKSEFRALMHNCQLCRDWFHDDCVPPPGSNQMLIVQQNGNGGGALNGGGSMPAQAKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILAQQQKRRSESSSCAAVLGNISSPRKPRRSHNLSKQESNNTARSESDNEDGDDVDDDDDDDECRLRIVEDGYSNDEDEQLPRLALNNAQASNCISTDLLKLLSDSEIENLLELMMEGDLLEVSLDETQELWRILETLPPSMLQAEAKARVAQHLQQHRQQLQQNQATPATVASSSSIHSGAEDSNDSLLVQNSPSPGAGSGGGAQTVRNKKRRSNDASSANVAVPRKKQNTPKQTPGKKSQAVRKSDSKASSSPGVDADAENKQANGGNTTTTTPTTPGTPANVAAATAAGTPTPAGGGGGGGGGGGGGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVAGGSASLTVTATTTSSLTLSTATPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00583457; iTF_01555905; iTF_00490562; iTF_00505890; iTF_00573826; iTF_00570179; iTF_00556995; iTF_00485640; iTF_00548584; iTF_00513961; iTF_00524905; iTF_00542219; iTF_00497932; iTF_00511054; iTF_00501584; iTF_00564434; iTF_00582740; iTF_00521947; iTF_00516773; iTF_00499368; iTF_00592872; iTF_00615979; iTF_00560013; iTF_00576845; iTF_00518226; iTF_00595731; iTF_00513239; iTF_00576125; iTF_01321699; iTF_01323892; iTF_00546436; iTF_00568036; iTF_00586460; iTF_00619620; iTF_00804964; iTF_01355908; iTF_00547141; iTF_00508102; iTF_00588646; iTF_00598662; iTF_00558439; iTF_01570023; iTF_00566568; iTF_00492745; iTF_00494889; iTF_00521129; iTF_00559273; iTF_00601545; iTF_01324681; iTF_00562250; iTF_00472144; iTF_00497163; iTF_00533581; iTF_00584959; iTF_00585742; iTF_00597934; iTF_00522735; iTF_00528577; iTF_00506638; iTF_00518937; iTF_00530735; iTF_00552815; iTF_00616687; iTF_00554178; iTF_00599363; iTF_00551366; iTF_00479273; iTF_00549331; iTF_00573097; iTF_00472845; iTF_00493427; iTF_00519699; iTF_00540147; iTF_00526358; iTF_00572381; iTF_00538014; iTF_00502303; iTF_00527825; iTF_00562961; iTF_00595026; iTF_00597138; iTF_00476404; iTF_00512500; iTF_00535092; iTF_00543522; iTF_00500086; iTF_00552087; iTF_00560820; iTF_00541556; iTF_00567317; iTF_00584212; iTF_00589332; iTF_00805748; iTF_00474997; iTF_00803381; iTF_00496374; iTF_00802614; iTF_00532151; iTF_01327671; iTF_00495640; iTF_01552952; iTF_00498649; iTF_00579066; iTF_00482011; iTF_00534363; iTF_00609659; iTF_01320251; iTF_00575356; iTF_00520413; iTF_00508883; iTF_00613971; iTF_00582045; iTF_00509599; iTF_00606848;
90% Identity
iTF_00526358;
80% Identity
-