Basic Information

Gene Symbol
Kdm5
Assembly
GCA_035045965.1
Location
JAWNOM010000389.1:3185175-3191987[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.5e-26 9.4e-23 80.5 0.1 2 89 247 330 246 330 0.95
2 2 9 1.9e+04 -4.3 0.1 56 70 1604 1619 1600 1627 0.61

Sequence Information

Coding Sequence
ATGTCCGCCAAAGCTGAGGCGGACAGTTTAGCCGCCAGTGGCGGCGGCACCGGAGGCGCCAATAGCAACTCCAATGGCACCGTAACACCGGCGCGACGCCTGCGCACCCGCAACTCAACCGGAAGTGGCAGCGAGTCGGCCAAAAAGAATTCAAACAGCAGTAgccacaataataataataacaataatagcagcagcaacaacaacaacaataacgaatCGGCTGCAACGGGAAATGACGGTCCAGCCGCATCAATTGGCGGAATGTCAATGCCAACAGCATCATCTGGCATTGGTGGTGCAGGTTCTGCAGGCACTCCATTGTCAGGGACACCCAGTTCCGCGGAACGTCCCATGCCCAGCGTGCCCATGAAtcatgccagcagcagcgtttCGGCCAGCAAAAAGTACCACAACAGCTGTCCGCATCCGACGCCGTCGGTGCACAAGAAATCGTTGCACACGAAgccgcacagcagcaacaagttcGATCAGAGCAAGAACGAGGAATTCAATTTTGATACACCGCCCGAGTGTCCAGTGTTTCGGCCGACAGAGGAGGAGTTCAAGAATCCATTGGCATACATTAGCAAGATTCGGTCCATAGGAGAGAAATGTGGCATTGCTAAGATCCTGCCGCCGGAAAAATGGTCACCGCCATTCGCCGTTGACGTGGACAAGTTGCGTTTTGTGCCGCGCGTGCAGCGTCTCAATGAGCTGGAGGCAAAGACGCGcgtcaaattaaatttcttggATCACATCGCCAAGTTCTGGGAGCTGCAAGGCTCTTCTCTGAAAATCCCTATGGTAGAGCGTAAGGCACTCGATCTATATACGTTACATCGCATCGTACAGGAGGAGGGTGGCATGGAGCAGACCACCAAGGAGCGCAAATGGGCCAAGGTGGCCAATCGCATGCAGTATCCATCCAGTAAAAGTGTGGGCGCCACACTCAAAGCCCATTACGAGCGCATTTTGCATCCCTTTGAGGTGTACACGTCGGGCAAAGTGCTGGGACCGAATGCGGCCGCTACTGCTGTGGGCGCAACGCCCGTCAAGCTCGAGGATGCGGGCACAGATTACAAGGCCCACGAGATACCCACACGTCAGCAAATTGCGCCGCCCAATGAGAATAATACGCGTCGTTCCAAGCGCTTCGGCAACTCGAATGCCAGCTGCGGCCTAAACACTAAACCAGGCGCCGCTGCTTCCATTACCATTAAGACGGAAACCAAGGAGGATTTCAAACGCGATCTATTGAGCAGCTTTAATGCGGTCAATGCGGGCGCCACAGCCGGCGCTAATCAATCGGCCAGCTGTGGAGCAGCCACACCGAACACACGCGCCACCCAAAAGAAGGCCACCACAGAGCTGCAGCAACCACTGATTGATCCACTGATGAAGTACATCTGTCACATCTGCAATCGCGGCGATGTCGAGGAGTCAATGCTGCTGTGTGACGGCTGCGATGATAGCTATCACACCTTCTGTCTGCTACCACCATTGAGCAGCATACCAAAAGGAGAATGGCTTTGTCCGCGTTGCGTTGTGGAGGAGGTGAGCAAGCCGCAGGAAGCATTTGGTTTCGAGCAGGCCGAGCGGGAGTACACATTGCAGCAATTTGGCCAGATGGCCGATCAATTCAAGCAGGAATACTTTCGGAAACCGGTACACTTGGTGCCCACGGAGCAGGTGGAGCGCGAATTTTGGCGCATTGTATCGTCAATTGATGAGGATGTAACTGTGGAGTATGGCGCTGATTTGCATACAATGGATCACGGCTCGGGTTTTCCCACAAAGAGCTCGCATTATTTGTTGCCCGGTGATCAGGAGTATGCCGAGTCTAGCTGGAATTTGAACAATCTGCCGTTGCTAGAGGATTCGATACTGGGCCACATTAATGCGGATATTAGCGGCATGAATGCGCCGTGGATGTATGTGGGCATGTGCTTTGCTGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCGATTAACTATTTGCATTGGGGCGAACCGAAGACCTGGTACGGTGTGCCCGGCTCCTGTGCCGAGCAGTTCGAGGAGACAATGAAGCGTGCCGCGCCCGAGCTATTCTCCTCGCAGCCCGATCTGCTGCATCAGCTGGTCACCATCATGAATCCGAACATATTAATGAACAATGGTGTGCCCGTCTTTCGCACCGATCAGCATGCCGGCGAGTTTGTAATCACCTTTCCGCGCGCCTATCATGCCGGCTTCAATCAGGGCTACAATTTCGCCGAGGCTGTCAATTTCGCTCCGGCGGATTGGCTGAAAATGGGACGCGAGTGCGTTAATCATTATTCAATGTTGCGTCGCTTCTGTGTCTTCTCGCACGACGAGCTCGTCTGCAAGATGGCCTTGGAGCCGGCCAAGCTGACCTTTGGCATTGCCACCGCCTGCTACATTGACATGGCCGAAATGGTGGACACCGAGAAGAAACTGCGCAAATCTCTTCTCGAATGGGGTGTCACACGCGCCGAGCGTCGCGCCTTCGAGCTTGTCAACGACGATGAACGCCATTGCCAGGAGTGCAATACGACTTGCTTCCTATCGGCCGTCGCCTGCGAGTGCAACGACAAGTTGATCGTCTGCCTGCGCCACTACACCGTGCTCTGCGGTTGTGCACCGGAGAAGCATACGCTCATCTATCGCTATACGCTGGACGAGATGCCGCTCATGCTGCAAAAGCTGAAGGTGAAGGCGCATAGCTTTGAGCGTTGGCTCTCACGTTGTCGCGACATTGTCGATGCCCATACGCCCACATCGGTAACACTGCAGGAGCTACAGGAGCTCTGCAAGGAAGCGGAGACCAAAAAGTTTCCATCGTCTCTACTCATTGATCGACTCAATGCGGCGGCCATCGAGGCAGAGAAGTGCGTGACAGTCATTCAACAGCTGGGCATTAATAAGGTGCGCACCCGTTCCGACCACAATCAGGAGGCGGCCCAATATAAGCTGACCAtggaggagctggagctgtttGTGCAGGAAATCGACAATCTGTGCTGCATCATCGACGAGGGCGCCTCGGTGCGTGAGCTTCTAGTGCTTGGCCGGCAGTTTGTGGAACGTGCCGATATCCAGTTGAAGCAGACACTGGAGACGCTGGAGGAGAACGAGCTGGAGACGCTGATCAATGAGGGCAGCTCGTTGCGCAttgagctgcagcagttggaTCATCTGCAGAAGCGTCTCAAGCAGTGCAAATGGTACAAACGTTCGCAGGGTTTGCGCGAGACCAGCTCGAAGCTGACCTACAACGATGTGAAGACGCTGCTGCATACGGCAGCCGCTGATCTGGATCCAACCGATCCGTATGTGGATCGTGAGATGCGTAAATTGCAGCAAATTGGAGCCGCAATCGAGGCGTGGGAGTCACAGGCAGCTAAATATTTCCGGCGACTCAATCAACAGCATGAGCTGGCCGAGATCGAACAGTTTCTGAAGTCCGCCACGGAGATCAATGGGCAGGTGCCGTCGCATGGCATACTAAAGGATGCGTTGCGCAAGGCACGCGAATGGCTGCGCTcggtggagcagctgcagcagaacaATCACGTCACCTATTGTCATACGCTGGAGGCAATGATTGACCGGGGCCTGAGCATACCCATCCAGCTGGAGGAGCTCGGTCGTATGCAGGGCCATTTGAATAGTGCACACCAGTGGAAGGACAATACGGCACGAGCGTTCCTGAAGAAGGACACACACTATACACTGCTGGAGGTGCTAATGCCGCGAGCAGAGCCCATCAATATCGACTCGGATCTCAAGCCGCGTTTCCAAGATGATTTCCTCAAGGACAAGAATCCCGCCGAAATTGTGGCCAGCTTCAAGCATGCCGAGGAGAAGGAGTTGCGCGATATGCGCGACCTTAGGCGCCGAAATATGGCGAAGAATCCATTGCGCGATGATTTCTGTCTGTGCAAAATGGAGTTCCGTGGCCTGATGCACAATTGTCAGCTGTGCCGCGACTGGTTTCACGAGGACTGTGTGCCACCGGTGCCCCATGCCCAGGCACAGGCGCAACAGAATGGCAATGGGGTCGCTGGTGGTGCAGTCAATGGCggaacatcatcatcatcgagcCAGCCAGCGCAACCCAAGTGGCTATGTCCGAGCTGTGTGCGCTCGAAGCGTCCACGTTTGGAGACAATTTTGCCGTTgctggtgcagctgcagcagttgccgaTTCGTCTGCCCGAGGATGAGGCATTGCGTTGCCTGGCAGAGCGTGCAATGAATTGGCAGGATCGTGCCCGCAAGGCGCTCAGCAGTCCCGATGTGAGCGCCGCCCTGGATGCCATATTGGCCCAACAGCAGAAGCGACGCTCCGAGAGCAGCAATTGTGCCGCCGTGCTGGGCAACATAAGCAGTCCGCGAAAGCCGCGACGATCGCACAATCTGTCCAAGCAGGAGACCAACAACACCGGCCGCTCCGTGTCCGATAATGAGGATGGGGACGATgtggacgacgacgatgatgatgatgagtgTCGGCTGCGCATTGTGGAGGACGGTTATAGTAATGATGAGGACGAGCAGCTGTCCCGATTGGCGCAAGGCAATACACAAACCAccggcaccaccaccaccaacaacagcagcagcggcggcggcggcagcactGATCTCTTGAAGCTGCTGTCCGACAGCGAAATCGAGAATCTGCTCGAGCTTATGATGGAGGGCGATCTGCTGGAGGTGTCGCTGGATGAGACGCAAGAGTTGTGGCGCATACTGGAAACGTTACCGCCCACACCGCTGCAGGCGGAGGCTAAGGCGCGAGTGGCGCAGCACTTGCAGCAACATCGTCAGCAGCAGTCAAGTCAGACGACGGCGTCAGCATTGACCAACGCATCCAGTGTACAAAGCGGCGCCGAGGATTCCAACGATAGCCTGCTCGTGCAAAACAGTCCAAGTCCTGGCGCTGGCAGCGGTCAAGCGGGGCGCAACAAGAAACGTCGCTCCAACGATGCGAGCAGCGCCAATGTGGCTGTGCCGCGCAAGAAACAGAATACGCCCAAGCAGACGCCGAGCAAGAAGACGCCGGCGGCGATGCGCAAGAGTGACAGCAAAGCGAGCAGCTCGCCGGGCGTCGATGCCGATGCGGAGAACAAGCAGGCGAATGGTGGCAATACGACGACGGCGACACCGACGACGACGCCAACGACACCGGGCTCGGCGGCGGGAGCGACTACACCCATACCGTCGGCTGGGCAAAAGAAACGGAAACGCACTACAACaaccacaaacaacaacaacaataataacaacaatagcagcaacaacagcaattctGGAGGCACGCCCACatctggcagcaacaacaatagcaacagcaatgcaaCAACAGGTGGCGGCCAGAAGAAGCATGCACAACGCACACAGCAAACAGCCCAGGAGGACGACGAGGAGGAGTGCCGCGCCGAGAATTGCCATAAGCCGACGGGACGTGAAGTGGACTGGGTGCAATGCGACGGCGGCTGCAACGAATGGTTTCACATGTACTGTGTGGGGCTCAATCGCAGCCAGATAAAGGCCGACGATGATTACATATGCATACGCTGCTCCAAGTCGGtcagcgtgggcgtggccggcggcagcagcagcctgacGGTGACCACAACGACGACCAGCAGCCTGACGCTGAGCACAGGGACGCCGGgcaagcagcgagcagcgcagTCGGCGCGGTAG
Protein Sequence
MSAKAEADSLAASGGGTGGANSNSNGTVTPARRLRTRNSTGSGSESAKKNSNSSSHNNNNNNNSSSNNNNNNESAATGNDGPAASIGGMSMPTASSGIGGAGSAGTPLSGTPSSAERPMPSVPMNHASSSVSASKKYHNSCPHPTPSVHKKSLHTKPHSSNKFDQSKNEEFNFDTPPECPVFRPTEEEFKNPLAYISKIRSIGEKCGIAKILPPEKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDHIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPNAAATAVGATPVKLEDAGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNASCGLNTKPGAAASITIKTETKEDFKRDLLSSFNAVNAGATAGANQSASCGAATPNTRATQKKATTELQQPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEQVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERADIQLKQTLETLEENELETLINEGSSLRIELQQLDHLQKRLKQCKWYKRSQGLRETSSKLTYNDVKTLLHTAAADLDPTDPYVDREMRKLQQIGAAIEAWESQAAKYFRRLNQQHELAEIEQFLKSATEINGQVPSHGILKDALRKAREWLRSVEQLQQNNHVTYCHTLEAMIDRGLSIPIQLEELGRMQGHLNSAHQWKDNTARAFLKKDTHYTLLEVLMPRAEPINIDSDLKPRFQDDFLKDKNPAEIVASFKHAEEKELRDMRDLRRRNMAKNPLRDDFCLCKMEFRGLMHNCQLCRDWFHEDCVPPVPHAQAQAQQNGNGVAGGAVNGGTSSSSSQPAQPKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILAQQQKRRSESSNCAAVLGNISSPRKPRRSHNLSKQETNNTGRSVSDNEDGDDVDDDDDDDECRLRIVEDGYSNDEDEQLSRLAQGNTQTTGTTTTNNSSSGGGGSTDLLKLLSDSEIENLLELMMEGDLLEVSLDETQELWRILETLPPTPLQAEAKARVAQHLQQHRQQQSSQTTASALTNASSVQSGAEDSNDSLLVQNSPSPGAGSGQAGRNKKRRSNDASSANVAVPRKKQNTPKQTPSKKTPAAMRKSDSKASSSPGVDADAENKQANGGNTTTATPTTTPTTPGSAAGATTPIPSAGQKKRKRTTTTTNNNNNNNNNSSNNSNSGGTPTSGSNNNSNSNATTGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKSVSVGVAGGSSSLTVTTTTTSSLTLSTGTPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530050;
90% Identity
iTF_00493427;
80% Identity
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