Basic Information

Gene Symbol
Kdm5
Assembly
GCA_035045305.1
Location
JAWNPD010000377.1:3437607-3445298[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.7e-26 8.9e-23 80.6 0.1 2 89 242 325 241 325 0.95
2 2 10 1.9e+04 -4.4 0.5 56 75 1583 1599 1578 1604 0.58

Sequence Information

Coding Sequence
ATGTCCGCCAAAGCCGAGGCGGACAATCCTGCCGCCAGCGTTGGCGGCAATGCAGGCGGCGGAGGCGTCAATAGCCACTCCAATGGGACTGTGACACCAGCGCGACGCCTGCGCACACGCAACTCAAccggtggcagtggcagcgagTCGGCCAAAAAGAAtaccaacagcagccacaataataacaataacaacaacagcagcaacaacaacaataatagcgAATCAGCAGCGGCGGGCAATGATGCaacaggaggaggaggaacaGCAACGCCTGCATCAGGTGCTGCTGGTGCATCGGGAGCAGCAGCGTCAACACCCAGCTCCGTGGATCGTCCGATGCCCAGCGTTCCGATGAATcatgccagcagcagcgtctcAGCCAGCAGGAAATATCACAATAGCTGTCCGCATCCAACGCCTTTGGTGCACAAGAAATCGCTGCACACGAAGCCGCATAGCAGCAATAAATTCGATCAGGGCAAGAACGAGGAATTCCATTTCGATACGCCGCCCGAGTGTCCGGTGTTTAGGCCCACAGCAGAGGAGTTTAAGAATCCGTTGGCCTACATTAGCAAGATACGCTCCATAGCAGAGAAATGTGGCATTGCCAAGATATTACCGCCGGAGAAATGGTCGCCACCATTTGCCGTCGATGTGGACAAGTTGCGGTTTGTGCCGCGCGTACAGCGCCTCAACGAACTGGAGGCCAAGACACGcgtcaaattgaatttcttgGATCAAATTGCCAAGTTCTGGGAGCTGCAAGGTTCCTCACTCAAAATACCGATGGTGGAGCGCAAAGCTCTCGATCTATATACGCTGCATCGCATCGTTCAAGAGGAGGGCGGCATGGAGCAGACCACCAAGGAGCGCAAATGGGCTAAGGTTGCCAATCGCATGCATTATCCATCCAGCAAGAGTGTTGGCGCCACACTCAAGGCCCACTACGAGCGCATACTACATCCCTTCGAGGTCTACACCTCCGGCAAAGTGCTGGGACCCGGCGCTGCCGGCGTAGCATCGGGCGCCACTCCCGTGAAGCTTGAGGATGTGGGCACCGATTACAAGGCCCATGAAATACCCACACGCCAGCAAATCGCTCCgccaaatgaaaacaatacGCGTCGCTCCAAGCGCTTTGGCAACTCGAATGTCGGCTGCGGCTTAAACATTGCCAAGCCGGGCTCAGCTCCCGCTGTCACCATCAAAACGGAAACCAAGGAGGATTTTAAGCGCGACCTATTGAGTAGCTTCAATGCTGTCAATACTgcaggtggtgctggtggtggcgctgctgctggcggtcAATCAGCTGGCTGTGGTGGTGCACCTGCACCGAATACACGGGCCACCCAAAAGAAGGCCTCAACAGAGCCACAGCAGCCGCTCATCGATCCACTCATGAAGTACATCTGTCACATCTGCAATCGCGGCGATGTCGAAGAGTCAATGCTGCTGTGTGACGGCTGCGACGATAGCTATCACACCTTCTGTCTATTGCCACCACTGAGCAGCATTCCTAAAGGAGAATGGCTTTGCCCGCGTTGCGTTGTGGAGGAGGTTAGCAAGCCGCAGGAAGCTTTTGGTTTCGAACAGGCCGAGCGTGAGTACACGTTGCAGCAGTTTGGTCAAATGGCCGATCAGTTCAAGCAGGAATACTTTCGGAAGCCTGTGCACTTGGTACCCACGGAGATGGTGGAGCGCGAATTCTGGCGCATTGTGTCATCGATTGATGAAGACGTGACTGTGGAGTATGGCGCTGATTTGCATACAATGGATCACGGCTCCGGGTTTCCCACAAAGAGCTCGCATTACTTGCTGCCCGGAGATCAGGAGTATGCCGAGTCTAGCTGGAATTTAAATAATCTGCCGTTACTGGAGGATTCAATACTGGGACATATAAATGCTGATATTAGCGGCATGAATGCGCCGTGGATGTATGTGGGCATGTGCTTTGCGGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCGATTAACTATTTACATTGGGGTGAGCCAAAGACATGGTACGGTGTGCCCGGCTCCCGTGCCGAGCAGTTCGAACAGACAATGAAGCGTGCCGCACCCGAGCTCTTCTCCTCGCAGCCCGATCTGCTGCATCAGTTGGTCACCATCATGAATCCCAATATATTGATGAACAATGGTGTCCCGGTCTATCGCACCGATCAGCATGCCGGCGAGTTTGTCATCACATTTCCGCGTGCCTATCACGCCGGCTTCAATCAGGGCTACAATTTTGCCGAGGCCGTCAATTTTGCACCCGCTGATTGGCTGAAAATGGGACGCGAATGCGTCAATCATTATTCAATGTTGCGTCGCTTCTGCGTCTTCTCACACGATGAGCTGGTCTGTAAGATGGCCTTAGAGCCGGCCAAGCTGACATTTGGCATTGCCACCGCTTGCTATATCGACATGGCTGAAATGGTCGATACGGAAAAGAAACTGCGCAAATCTCTGCTGGAATGGGGCGTCACTCGCGCCGAACGTCGCGCCTTCGAGCTGGTCAACGATGACGAACGCCATTGCCAGGAGTGCAACACCACCTGCTTTCTCTCGGCCGTTGCCTGCGAGTGCAACGACAAGCTGATTGTCTGCCTGCGCCATTACACAGTGCTCTGCGGCTGTGCACCAGAGAAACACACGCTCATCTATCGCTATACCCTGGACGAGATGCCGCTGATGCTGCAGAAGTTGAAGGTCAAAGCGCATAGCTTTGAGCGTTGGCTGTCGCGTTGTCGCGACATTGTTGATGCGCACACGCCCACATCGGTGACGCTGTCCGAGCTGCAGGAACTGTGCAAGGAGGCCGAAACCAAAAAGTTTCCCTCATCGTTGCTCATCGATCGCCTGAATGCGGCGGCCATCGAGGCCGAGAAATGCGTCACCGTCATACAACAGCTGGGCATCAATAAGgtACGCACCCGCTCCGATCACAATCAGGAGGCGGCACAATATAAGCTGACCATGGAGGAGCTGGAGTTGTTTGTACAAGAAATCGACAATTTGTGCTGCATCATTGATGAGGGTGCCTCGGTGCGTgagctgctggtgctgggcaGACAGTTTGTGGAGCGGGCCGAGTCGCAGCTGCAGTTATCGCTGGAGGCGCTCGAGGAGAATGATATGGAAACGCTGATTAATGAGGGCAGCTCGTTGCGCAttgaactgcagcagctggatCAGCTGCAGAAGCGTCTCAAGCAATGCAAATGGTATAAACGCTCTCAGGGCTTGCGCGAGACCAGCTCCAAGCTGACCTACAAAGATGTGGAAACGCTACTGCACACCGCGGCCGCTGATCTGGATCCCACCGATCCCCATGTGGATCGCGAGATGCGTAAACTGCAGCAAATTGGCGCTGCAATCGAGGCGTGGGAATTGCAAGCAGCTAAATATTTCCGCCGGCTCAATCAGCAGCACGAGCTGGCCGAGATTGAGCAGTTTCTAAAGTCCGCCGGCGAAATCAACGGTCAGGTGCCGTCGCATGGCATTCTAAAGGATGCGCTGCGCAAGGCGCGCGAATGGCTACGCGCtgtggagcaactgcagcaaaacAATCATGTCACCTATTGTCACACGCTGGAGGCGATGATAGAGCGGGGCCTGAGTATACCTATCCAGCTGGAGGAATTGGGCCGCATGCAGGGACATTTGAATAGTGCACATCAGTGGAAGGAGAATACGGCTCTTGCGTTCCTGAAGAAGGGCACATTCTATACGCTGCTGGAGGTGCTGATGCCGCGTGCAGATGCCATTAACATTGACTCGGATCTCAAGCCGCGTTTCCAAGATGATTTCCTCAAGGACAAGAATCCCGCCGAAATTGTGGCCAGCTTCAAGCAAGCCGAGGAGCAGGAACTACGCGAAATGCGCGACCTCAGACGCCAGAATACGACAAAGAATCCATTGCGTGATGTCTTCTGCCTATGTAAATCGGAATTCCGTGGACTGATGCACAATTGCCAGCTGTGCCGCGATTGGTTCCACGAGGATTGCGTCCCTCCGCCGTCAGCGCAGTCAATGCTAGCGCAACAACAGAATGGCAATGGTGGAGCAATTAATGGTGGTGCGTCCATCTCAGCGCTATCCAAGTGGCTGTGTCCAAGCTGTGTGCGCTCGAAGCGTCCACGCTTGGAGACGATTTTGCCGCTGCTCGTccagctgcaacagctgccCATCCGCCTGCCGGAGGATGAGGCATTGCGCTGTTTGGCAGAGCGTGCCATGAACTGGCAGGATCGTGCTCGCAAAGCTCTAAGCAGTCCCGATGTCAGTGCCGCTCTGGATGCCATCTTGTCGCATCTGCAGAAGCGTCGCTCGGAGAGCGGCAGCTGCGCCGCTGTCCTAGGCAACATTAACAGTCCAAGGAAGCCGCGACGTATGCATAAGCACGAAGCCAACAACACGGGTCGTTCCGAATCGGATGCTGAGGATGTTGAcgatgttgatgatgacgacgatgatgatgagtgCCGGCTGCGTATTGTCGAGGAAGGGTATAGCAATGATGAGGATGACCAGCTGCCGCGACTGGCATCAGCGAATGCGCAAACCAGCACTACTGATCTCTTGAAGCTGCTCTCCGAGAGCGAAATTGAGAATCTGCTGGAGCTAATGATGGAGGGCGATTTGCTGGAGGTGTCGCTGGATGAGACGCAAGAGCTGTGGCGCATACTGGCAACAATGCCGCCCACAATACTGCAAGCCGAGGCCAAGGCGCGTGTGGCACAgcatatgcagcagcagcagcaacagaagcaacaacaatcgttGGCCAATGCATCCACAGTCGCCTCCTCGTCGAGCATACACAGTGGCGCTGAGGATTCCAATGACAGCCTGCTGGTCCAAAATAGTCCAAGTCCCGGCGCTCAAGCGGTGCGCAATAAGAAGCGACGCTCCAACGATGCCAGCAGCGCCAATGTGGCTGTGCCGCGCAAGAAACAGAATACGCCCAAGCAGACGCCGGGCAAGAAGTCGCAGGCGGTGCGCAAAAGCGATAGCAAGGCGAGTAGCTCGCCCGGCGTCGATGCCGATGCAGAGAATAAGCAGGCAAATGGTGGCAatacaacaatagcagcaacaacaacagccacagccaccacACCAACAACGCCGggcccagcagcaacagcagcaacaggaacagcaggtgctgttgctgccacgcccacaccggGCTCAGCTGGTCACAAGAAGCGCAAACGCACCAccacaaccaacaacaataataatagcaacaacaacaacaatagcaacagtggcaacaacaccaacaccaatgCAGGCGGCACACCCACAGCTGGTGGCACCAGCAATCCGCCAACAGGTGGcgctggcggcggcggtggtggtggtcaGAAGAAGCATGCGCAACGCACACAGCAAACGGCGCAGGAGGATGACGAGGAGGAATGCCGTGCAGAGAATTGCCATAAGCCAACAGGACGCGAGGTGGACTGGGTGCAGTGCGACGGTGGCTGCAACGAATGGTTTCACATGTACTGTGTGGGCCTGAATCGCAGCCAGATCAAAGCCGACGATGATTACATTTGTATACGCTGCTCCAAGACGGTCAGCGTGAGTGTAGCTGCCGGAGGCAGCAGCAGTCTAACGATGACCACAACGACAACCAGCAGCCTGACGTTAAGCACAGGGACGCCGGGTAAGCAGCGAACAGCGCAATCGGCGCGGTAG
Protein Sequence
MSAKAEADNPAASVGGNAGGGGVNSHSNGTVTPARRLRTRNSTGGSGSESAKKNTNSSHNNNNNNNSSNNNNNSESAAAGNDATGGGGTATPASGAAGASGAAASTPSSVDRPMPSVPMNHASSSVSASRKYHNSCPHPTPLVHKKSLHTKPHSSNKFDQGKNEEFHFDTPPECPVFRPTAEEFKNPLAYISKIRSIAEKCGIAKILPPEKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMHYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPGAAGVASGATPVKLEDVGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNVGCGLNIAKPGSAPAVTIKTETKEDFKRDLLSSFNAVNTAGGAGGGAAAGGQSAGCGGAPAPNTRATQKKASTEPQQPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEQFEQTMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERAESQLQLSLEALEENDMETLINEGSSLRIELQQLDQLQKRLKQCKWYKRSQGLRETSSKLTYKDVETLLHTAAADLDPTDPHVDREMRKLQQIGAAIEAWELQAAKYFRRLNQQHELAEIEQFLKSAGEINGQVPSHGILKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLSIPIQLEELGRMQGHLNSAHQWKENTALAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKDKNPAEIVASFKQAEEQELREMRDLRRQNTTKNPLRDVFCLCKSEFRGLMHNCQLCRDWFHEDCVPPPSAQSMLAQQQNGNGGAINGGASISALSKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILSHLQKRRSESGSCAAVLGNINSPRKPRRMHKHEANNTGRSESDAEDVDDVDDDDDDDECRLRIVEEGYSNDEDDQLPRLASANAQTSTTDLLKLLSESEIENLLELMMEGDLLEVSLDETQELWRILATMPPTILQAEAKARVAQHMQQQQQQKQQQSLANASTVASSSSIHSGAEDSNDSLLVQNSPSPGAQAVRNKKRRSNDASSANVAVPRKKQNTPKQTPGKKSQAVRKSDSKASSSPGVDADAENKQANGGNTTIAATTTATATTPTTPGPAATAATGTAGAVAATPTPGSAGHKKRKRTTTTNNNNNSNNNNNSNSGNNTNTNAGGTPTAGGTSNPPTGGAGGGGGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVSVAAGGSSSLTMTTTTTSSLTLSTGTPGKQRTAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530050;
90% Identity
iTF_00508102;
80% Identity
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