Basic Information

Gene Symbol
Kdm5
Assembly
GCA_035047465.1
Location
JAWNPQ010000260.1:2077685-2085349[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-26 6.4e-23 80.9 0.1 2 89 261 344 260 344 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAAGCCGAGGCGGACAATCTAGCCGCCAGCGCCACAGGCGGCGGCACCggaggcagcaacagcaactccAATGGCACCGTAACGCCAGCGCGACGCCTGCGCACCCGCAATTCaaccggcagcggcagcgagtcGGCCAAAAAGAATACAAACACCAGCGGCAGTTAcggcaataataacaacaacaacagcaacaacaataacaacaacaacaatagcgaaTCAACCGGGACAGGTGGCAATGATGgatcatcagcaacaacaggaatAATGACAGCATcaggtggtggtggtggtgctggtggagGTGGAGTtggtggagctgctgctgcagcagcatcatctgcagctgccacagccacgccccccatACCGGTGGAGCGTCCCATGCCCAGCGTGCCGATGAAtcacgccagcagcagcgtctcGGCCAGCAAGAAATATCACAATAGCTGCCCCCATCCAACACCCACGGTGCACAAGAAATCGCTGCACACCAAGCCGCACAGCAGCAATAAGTTCGATCAGGGCAAGAACGAGGAATTCCATTTCGATACGCCGCCCGAGTGTCCAGTTTTTCGCCCGACAGCGGAGGAGTTTAAAAACCCATTGGCGTACATTAGCAAGATACGGGCCATAGCTGAGAAATGTGGCATTGCCAAGATATTGCCGCCGGAGAAATGGTCGCCGCCGTTTGCCGTCGATGTCGACAAATTGCGTTTTGTGCCGCGCGTGCAGCGTCTCAACGAACTGGAGGCCAAGACGCGCGTCAAGTTGAATTTCTTGGATCAGATCGCCAAGTTCTGGGAGCTGCAGGGCTCCTCACTCAAAATTCCGATGGTGGAGCGCAAAGCTCTCGATCTGTATACGTTGCATCGCATTGTGCACGAGGAGGGCGGCATGGAGCAGACGACCAAGGAGCGCAAATGGGCCAAGGTCGCCAATCGCATGCAGTATCCGTCGAGCAAAAGTGTTGGCGCCACCCTCAAGGCCCACTACGAGCGCATACTTCATCCCTTCGAGGTCTACACCTCCGGCAAGGTACTGGGACCGGGCACGGGCGCGGGCGCGaccgcggccgccgccgccgctgcggtCCCCACACCCGTTAAGCTCGAGGATGTCGGCACCGATTACAAGGCCCACGAAATACCCACACGCCAGCAGATCGCGCCCCCCAATGAAAACAATACACGTCGCTCCAAACGTTTCGGCAACTCCACGGCCAGCTGCGGCCTGAATAGCGTCACCAAACCGGGCGCTGCTGGCGTCACCATCAAAACGGAAACCAAGGAGGACTTCAAGCGCGATCTACTGAGCAGCTTCAATGCGGTCAACACCGGTGCCGGTGGGGCAGCTGCTAACGCTGGCCAGTCGGGCGGCTGTGTCGTCCCCAATACGCGTGCCACCCAAAAGAGGGCCACCACGGAGCCACAGCAACCGCTTATCGATCCACTGATGAAGTACATCTGTCACATCTGCAATCGCGGCGATGTCGAGGAGTCGATGCTCTTGTGCGACGGCTGCGACGACAGCTATCACACCTTCTGCCTGCTACCACCGTTGAGCAGCATACCGAAAGGAGAATGGCTGTGCCCGCGTTGCGTTGTGGAGGAGGTGAGCAAGCCGCAGGAAGCTTTTGGTTTCGAGCAGGCCGAGCGTGAGTACACATTGCAGCAATTTGGCCAGATGGCCGATCAGTTTAAGCAGGAATACTTTCGGAAGCCGGTGCACTTGGTGGCCACGGAGCTGGTCGAGCGCGAATTCTGGCGCATTGTCTCCTCCATTGACGAGGATGTAACTGTTGAATATGGCGCCGATTTGCATACAATGGACCATGGCTCTGGGTTTCCCACAAAGAGCTCCCATTATTTGCTGCCCGGTGATCAGGAGTATGCCGAGTCCAGCTGGAATTTGAACAATCTGCCGCTGCTGGAGGATTCGATACTGGGTCACATTAATGCCGATATTAGCGGCATGAACGCACCCTGGATGTATGTGGGCATGTGCTTTGCGGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCGATTAACTATTTGCATTGGGGCGAGCCAAAGACCTGGTACGGTGTCCCCGGCGCCTTTGCCGAACAGTTCGAGCAGACCATGAAGCGTGCCGCGCCCGAGCTATTTTCATCGCAGCCCGATCTGCTCCATCAGCTGGTGACGATCATGAATCCCAATATATTGATGAACAACGGTGTGCCCGTCTATCGCACCGATCAGCATGCCGGCGAATTTGTCATCACATTTCCGCGCGCCTATCACGCCGGCTTCAATCAGGGCTACAATTTCGCCGAGGCGGTCAACTTTGCGCCCGCCGACTGGCTAAAGATGGGACGCGAGTGCGTCAATCATTATTCGATGCTGCGCCGGTTCTGTGTCTTCTCGCACGACGAGCTGGTCTGCAAGATGGCCCTGGAGCCGGCCAAGCTGACGTTCGGCATTGCCACCGCTTGCTATATCGACATGGCCGAAATGGTCGACACGGAGAAGAAGCTGCGCAAATCCCTGCTCGAATGGGGCGTCACGCGCGCCGAACGTCGCGCCTTCGAGCTGGTCAACGACGATGAGCGTCACTGCCAGGAGTGCAATACCACCTGCTTCCTGTCGGCCGTCGCCTGCGAGTGCAACGACAAGCTGATCGTCTGCCTGCGCCATTACACCGTGCTCTGCGGCTGTGCGCCCGAGAAGCACACGCTCATCTACCGTTATACGCTCGATGAGATGCCGCTGATGCTGCAAAAGCTGAAGGTGAAGGCCCACAGCTTCGAGCGCTGGCTGTCCCGTTGTCGCGACATCGTCGACGCCCACACGCCCACCTCGGTGACGCTGTCCGAGCTGCAGGAGCTCTGCAAGGAGGCGGAGACCAAAAAGTTTCCCTCGTCCCTGCTCATCGATCGCCTAAATGCGGCGGCCATTGAGGCGGAGAAATGTGTTACGGTCATACAACAGCTGGGCATCAACAAggTACGCACCCGCTCCGATCACAACCAGGAGGCGGCCCAGTATAAGCTGACAAtggaggagctggagctgttcGTGCAGGAAATCGATAATCTGTGCTGCATCATCGACGAGGGCGCCTCGGTGCGGGAGCTCCTGGTGCTGGGCAGGCAGTTTGTGGAGCGCGCCgaggcgcagctgcagctatcGCTGGATGCGCTCGAGGAGAACGAGCTGGAGACGCTGATCAACGAGGGCAGCTCGTTGCGCatcgagctgcagcagctggaccGGCTGCAGAAGCGGCTCAAGCAGTGCAAATGGTACAAACGGTCCCGGGGCCTGCGCGAGACGAGCTCCAAGCTGACCTACAACGATGTCAAGACGCTGCTGCACACCGCGGCCGCTGATCTGGATCCAACCGATCCGTATGTGGATCGCGAGATGCGCAAGCTGCAGCAGATTGGCGCAGCGATCGAAGCCTGGGAACTGAAGGCCGGCAACTATTTCCGCCGCTTGAACCAGCAGCACGAGCTGGCCGAGATTGAGCTGTTTCTGAAGTCCGCCAGCGAGATCAACGGCCAGGTGCCCTCGCACGGCCTGCTAAAGGATGCGCTGCGCAAGGCACGCGAATGGCTGCGCGCCGtcgagcaactgcagcagaacAATCACGTCACCTACTGTCACACGCTGGAGGCGATGATCGAGCGCGGCCTGAACATACCCATCCAGCTGGAGGAGCTCGGCCGCATGCAGGGGCATTTGAATAGTGCACACCAGTGGAAGGATAATACGGCGATCGCGTTCTTAAAGAAGGGCACGTTCTATACGCTGCTGGAGGTGCTGATGCCACGCGCGGATGCCATCAATATTGACTCGGATCTCAAGCCGCGTTTCCAAGATGATTTCCTCAAGGACAAGAATCCCGCCGAAATTGTGGCCAGCTTCAAGCATGCCGAGGAGCAGGAGTTGCGCGACATGCGCGACCTCAGGCGCCAGAATATGTCCAAGAATCCGTTTCGCGATGTCTTCTGTCTGTGCAAGTCCGAGTTTCGCGGCCTGATGCACAATTGCCAGCTGTGCCGCGACTGGTTCCACGACGATTGCGTGCCCCCGCCCGCTGCCAATCAGGCGCAGCAGAATGGCAACGGTGGTGCACTGAACGGTGGGGGTGGCGGTGGTGCAGCGGTGCCGGCGCAGGCCAAGTGGCTGTGCCCGAGCTGTGTGCGCTCGAAGCGTCCACGTTTGGAGACCATATTGCCGCTGCTcgtccagctgcagcagctgccgatTCGCCTACCCGAGGATGAGGCGTTGCGCTGCCTCGCGGAGCGCGCCATGAACTGGCAGGATCGCGCCCGCAAGGCGCTCAGCAGTCCCGATGTCAGCGCCGCCTTGGATGCCATTTTGAGCCAGCAGCAGAAGCGGCGCTCCGAGAGCAGCACCTGTGCCGCCGGCCTGGGCAACATCAGCAGTCCACGGAAGCCGCGACGCACGCACAATCTGTCCAAGCTGGATGCCAACAACATGGCCCGCTCCGAGTCCGACAACGAGGATGGCGACGACGtggatgacgatgacgacgacgacgatgaatGCCGGCTGCGCATCGTCGAGGACGGGTATAGCAACGATGAGGACGAACAGCTGCCGCGCCTGGCGCCAATCAATGCCCAGGCGAGCGACTGCATCAACACTGATCTCATGAAGCTGCTCTCCGACAGCGAAATTGAGAATCTGCTCGAGCTTATGATGGAGGGCGATCTGCTCGAGGTGTCGCTGGATGAGACGCAGGAGCTGTGGCGCATACTGGAAACGCTGCCGCCCAACAATCTGGAGGCCGAGGCCAAGGCGCGTGTGGCGGAAcatttgctgcagcagcagcgccagccgcagctgcaccagtcgcagcagcagcatcagcatcagcatcagcagcagcagcagcaccaacttcagcagcagcaacagcaactgctgctaAATCAGGCGACTCCAGCCATGGTCGCCGCCTCCTCGTCCAGCATACACAGCGGCGCCGAGGACTCGAACGATAGCCTGCTCGTGCAGAATAGTCCAAGTCCCGGCGCCGGCAGCGTCGGCAGCGTGCAGACGGTGCGCAACAAGAAGCGGCGCTCGAATGACGCCAGCAGCGCCAATGTGGCCGTGCCGCGCAAGAAACAGAATACGCCCAAACAGACGCCGGGCAAGAAGTCGCAGGCGGTGCGCAAAAGCGACGCCAAGGCGAGCAGCTCGCCGGGCGTCGATGCCGATGCGGAGAACAAGCAGGCGAACGGCGGCAACACGACGGCGAGCACGCCGAACACGCCCACGGGCGCGGCAGCGGGggcggctgcggcagctgccggTGGCACGCCCACGCCGGCGGCTGGGCACAAGAAGCGCAAGCGCacgacaacaaccaacaacaacaacaatagcaacagcaacagcaacaacaacagcggcagcaacaacaacaacagcagcaatgcTGGCAACACGCCCACAGCGGGCAACAACAATCCGGCAACAggtggaggcggcggcggcggcggcggcggcggcagcggcgccggcggagGCCAGAAGAAGCACGCGCAGCGCACGCAGCAGACGGCGCaggaggacgacgaggaggagtgCCGTGCGGAGAATTGCCATAAGCCCACCGGACGGGAGGTGGACTGGGTGCAGTGCGACGGCGGCTGCAACGAGTGGTTCCACATGTACTGCGTGGGCCTCAATCGCAGCCAGATAAAGGCCGACGACGATTACATATGCATACGCTGCTCCAAAACGgtcagcgtcggcgtcgccggcggcagcggcagtctAACGGTGACCACGACGACCACCAGCAGCCTGACGCTGAACACGACGACGCCTGGGAAGCAGCGAGCAGCGCAGTCGGCGCGGTAG
Protein Sequence
MSAKAEADNLAASATGGGTGGSNSNSNGTVTPARRLRTRNSTGSGSESAKKNTNTSGSYGNNNNNNSNNNNNNNNSESTGTGGNDGSSATTGIMTASGGGGGAGGGGVGGAAAAAASSAAATATPPIPVERPMPSVPMNHASSSVSASKKYHNSCPHPTPTVHKKSLHTKPHSSNKFDQGKNEEFHFDTPPECPVFRPTAEEFKNPLAYISKIRAIAEKCGIAKILPPEKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVHEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPGTGAGATAAAAAAAVPTPVKLEDVGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSTASCGLNSVTKPGAAGVTIKTETKEDFKRDLLSSFNAVNTGAGGAAANAGQSGGCVVPNTRATQKRATTEPQQPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVATELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGAFAEQFEQTMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERAEAQLQLSLDALEENELETLINEGSSLRIELQQLDRLQKRLKQCKWYKRSRGLRETSSKLTYNDVKTLLHTAAADLDPTDPYVDREMRKLQQIGAAIEAWELKAGNYFRRLNQQHELAEIELFLKSASEINGQVPSHGLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIQLEELGRMQGHLNSAHQWKDNTAIAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKDKNPAEIVASFKHAEEQELRDMRDLRRQNMSKNPFRDVFCLCKSEFRGLMHNCQLCRDWFHDDCVPPPAANQAQQNGNGGALNGGGGGGAAVPAQAKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILSQQQKRRSESSTCAAGLGNISSPRKPRRTHNLSKLDANNMARSESDNEDGDDVDDDDDDDDECRLRIVEDGYSNDEDEQLPRLAPINAQASDCINTDLMKLLSDSEIENLLELMMEGDLLEVSLDETQELWRILETLPPNNLEAEAKARVAEHLLQQQRQPQLHQSQQQHQHQHQQQQQHQLQQQQQQLLLNQATPAMVAASSSSIHSGAEDSNDSLLVQNSPSPGAGSVGSVQTVRNKKRRSNDASSANVAVPRKKQNTPKQTPGKKSQAVRKSDAKASSSPGVDADAENKQANGGNTTASTPNTPTGAAAGAAAAAAGGTPTPAAGHKKRKRTTTTNNNNNSNSNSNNNSGSNNNNSSNAGNTPTAGNNNPATGGGGGGGGGGGSGAGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVAGGSGSLTVTTTTTSSLTLNTTTPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530050;
80% Identity
-