Basic Information

Gene Symbol
Kdm5
Assembly
GCA_037075305.1
Location
JBAMCE010000577.1:9643473-9649760[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-26 3.7e-23 81.8 0.1 2 89 252 335 251 335 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAAGCCGAGGCGGACAATCTAGCCGCCAGCGCCACTGGCGGCGGCCCAGGAGGCGGTAATAGCAACTCCAATGGTACCGTAACACCAGCGCGACGCCTGCGCACACGCAACTCAACcggtggcagtggcagcgagTCGGCCAAAAAGAACACCAACAACAGTAaccacaataataataacaacaatatcaacaacaacaacaataataataataataacgaaTCAGCTGCAACGGGCAACGATggttcagcagcaacaacaggaatAATGCCAACATCAgtcggtggcggcggcggtgcagCTACCGGTGGAGGtggtgcagcagcaacaggagcgaCTCCCAGCTCCGCTGAACGCCCCATGCCCAGCGTGCCGATGAATCATGCCAGCAGCAGTGTTTCGGCCAGCAAGAAATATCACAATAGCTGTCCGCATCCAACGCCCACAGTGCACAAGAAGTCGCTGCACACGAAGCCGCATagcagcaataaatttgatCAGGGCAAGAACGAGGAATTCCATTTTGATACGCCGCCCGAGTGTCCAGTGTTCCGGCCGACAGCGGAGGAGTTTAAAAATCCATTGGCATACATTAGCAAAATACGCTCCATAGCTGAGAAATGTGGCATTGCCAAGATATTACCGCCGGAGAAATGGTCACCGCCATTTGCTGTCGATGTGGATAAGTTACGTTTTGTACCACGCGTTCAGCGTCTCAATGAATTGGAGGCCAAGACACgtgtcaaattaaattttttggaTCAAATCGCCAAATTCTGGGAGCTGCAAGGCTCCTCCCTGAAAATTCCCATGGTGGAGCGCAAGGCTCTAGATCTATATACTCTGCATCGCATTGTGCAGGAGGAGGGCGGCATGGAGCAGACCACCAAGGAGCGCAAATGGGCCAAAGTGGCCAATCGCATGCAGTATCCATCCAGCAAAAGTGTTGGTGCCACACTCAAAGCCCACTACGAGCGAATACTTCATCCGTTTGAGGTCTACACCTCTGGTAAGGTATTGGGTCCTGGCTCAGCACCTACTGCCGTGAACGCAACGCCCGTCAAGCTCGAGGATGTTGGCACCGATTACAAGGCCCATGAAATACCCACACGTCAGCAAATCGCGCcgccaaatgaaaacaatacgCGTCGCTCCAAGCGCTTTGGCAATTCAAATGCCAGCTGTGGCCTAACCACGGTCAAGCCAGGCTCTGCTGCAGTCACCATCAAAACAGAAACCAAGGAAGATTTTAAACGCGACCTTTTGAGCAGCTTCAATGCAGTCaatgctgctggtggtggtgccgCTGGCGTTGGTCAGTCAGCCGGCTGTGGGGCAACAACACCTGCACCCAACACGCGTGCCACCCAAAAGAAAGCCAGCACAGAGCCACAGCAACCGCTTATCGATCCGCTCATGAAGTACATTTGTCACATCTGCAATCGCGGCGACGTCGAGGAGTGCATGCTGCTCTGTGACGGTTGCGACGATAGCTATCATACCTTCTGCTTGTTGCCACCATTGAGCAGCATACCGAAAGGTGAATGGCTGTGCCCACGTTGCGTTGTGGAGGAGGTGAGCAAGCCGCAGGAAGCTTTTGGTTTCGAGCAGGCCGAGCGTGAGTACACATTGCAGCAGTTTGGTCAGATGGCCGATCAGTTCAAGCAGGAATATTTTCGCAAACCGGTGCACTTGGTGCCCACGGAGATGGTGGAGCGCGAATTCTGGCGTATTGTCTCCTCAATTGATGAGGATGTGACTGTGGAATATGGCGCTGATTTGCATACAATGGATCATGGCTCTGGTTTTCCCACAAAGAGCTCCCATTATTTGCTGCCCGGTGATCAGGAGTATGCCGAATCCAGCTGGAATTTAAATAACCTACCGTTGCTGGAGGACTCAATACTAGGGCATATCAATGCTGATATTAGCGGCATGAATGCGCCTTGGATGTATGTGGGCATGTGCTTTGCTGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCGATTAACTATTTGCATTGGGGCGAGCCAAAGACTTGGTACGGTGTGCCCGGCTCCTGTGCCGAACAGTTCGAGGAGACCATGAAACGCGCCGCGCCCGAGCTATTTTCCTCGCAGCCCGATTTGCTGCATCAACTGGTCACGATTATGAATCCCAATATATTGATGAACAACGGTGTGCCCGTTTATCGTACCGATCAACATGCCGGCGAATTTGTCATAACATTTCCGCGCGCCTATCACGCCGGCTTTAATCAGGGCTACAATTTCGCCGAGGCCGTCAACTTTGCGCCCGCAGATTGGCTTAAAATGGGACGCGAATGCGTCAATCATTATTCAATGCTGCGTCGCTTCTGTGTGTTCTCGCACGATGAGCTAGTCTGCAAGATGGCCTTGGAGCCGGCCAAGCTGACTTTTGGCATTGCCACCGCTTGCTATATAGACATGGCCGAGATGGTCGACACGGAAAAGAAACTGCGCAAATCTCTGCTGGAATGGGGCGTCACACGCGCCGAACGTCGCGCCTTCGAACTGGTCAACGATGATGAGCGCCATTGCCAGGAGTGCAACACCACCTGCTTTCTATCGGCCGTTGCCTGTGAGTGCAACGATAAGCTGATTGTCTGCCTGCGCCACTATACCGTACTCTGCGGCTGTGCGCCAGAGAAGCATACGCTCATCTATCGATATACGCTGGACGAGATGCCGCTCATGCTGCAAAAGTTAAAGGTTAAGGCGCACAGCTTTGAGCGTTGGCTATCCCGCTGTCGCGACATTGTCGatgcacacacgcccacatcGGTTACGCTGTCCGAGCTGCAGGAGCTTTGCAAGGAGGCCGAGACCAAAAAGTTTCCCTCATCCCTGCTCATCGATCGGCTCAATGCAGCGGCCATTGAGGCCGAGAAATGTGTCACGGTCATACAACAGCTGGGCATTAATAAGGTGCGCACCCGATCCGATCACAATCAGGAAGCAGCACAATATAAGCTGACCATGGAGGAGCTGGAGTTGTTTGTACAGGAAATCGATAATCTGTGCTGCATCATCGATGAGGGAGCCTCGGTGCGTGAGCTGCTTGTGCTGGGACGACAGTTTGTGGAACGCGCCGattcgcagctgcagctgtcgctTGAGGCGCTCGAGGAGAACGATTTGGAGACGCTGATCAATGAGGGCAGCTCGTTGCGCATTGAGCTCCAGCAGCTGGATCAGTTGCAGAAGCGActcaaacaatgcaaatggtACAAACGTTCACAGGGCTTGCGCGAGACCAGCTCGAAGCTGACCTACAAAGATGTGAAGAACCTGCTGCATACGGCAGCTGCTGATCTGGATCCGACCGATCCGTATGTGGATCGTGAGATGCGTAAACTGCAGCAAATTGGCGCCGCAATCGAGGCATGGGAATCACAGGCAGCTAAATATTTTCGACGACTCAATCAGCAGCATGAGCTGGCCGAGATTGAGCAGTTTCTCAAGTCCGCCAGCGAAATCAATGGGCAGGTGCCGTCGCATGGTGTCTTAAAGGATGCACTACGCAAGGCACGGGAATGGCTGCGTGCCGTGGAACAATTGCAGCAGAATAATCACGTCACCTACTGTCACACGCTGGAGGCGATGATCGATCGTGGCCTCAATATACCCATCCAGCTGGAGGAGCTCGGTCGTATGCAGGGTCATTTGAGTAGTGCACATCAGTGGAAGGAGAATACGGCGCGTGCGTTCTTGAAGAAAGGTACATTCTATACGCTGCTGGAGGTGCTGATGCCGCGTGCAGATGCCATCAATATTGACTCGGATCTCAAGCCGCGTTTTAAAGATGATTTCCTAAAGGACAAGAATCCCGCCGAAATTGTGGCCAGCTTCAAGCATGCCGAGGAGCAGGAATTGCGCGATATGCGTGATCTAAGGCGCCAGAATATGACCAAGAATCCTTTGCGCGACGTCTTCTGTCTATGCAAGTCCGAATTTCGTGGCCTCATGCACAATTGCCAGCTGTGCCGCGATTGGTTTCACGAGGATTGCGTGCCCCCGGTTCCGGATGCCCAGCCACTGATGGTCCAACAAAATGGGAATGGTAATGGAGGTGCAATTAATGGGGGAGGTGCATCAATGCCGGCGCAAGATAAGTGGCTGTGTCCGAGCTGTGTGCGCTCGAAGCGTCCACGTTTGGAGACCATTCTGCCGCTGCTcgtgcagctgcaacagctgcccaTACGTCTACCTGAGGATGAGGCGTTGCGCTGTTTGGCGGAGCGTGCCATGAACTGGCAGGATCGCGCACGCAAAGCGCTCAGCAGTCCCGACGTCAGCGCCGCTCTAGATGCCATTTTGGCTCAACATCAGAAGCGTCGCACGGAGAGCACCAGCTGCGGCGCCGCCGTGCTGGGCAACATAAGCAGTCCGAGGAAGCCGCGACGTACGCACAATCTGTCCAAGCAGGAAGCCAACAATGCGGGGCGTTCCGAGTCAGATAACGAGGATAATGGGGATGATGtggatgacgatgacgacgatgatgaatGCCGGCTTCGCATTGTAGAGGACGGGTATAGCAATGATGAGGACGAGCAGCTGCCGCGACTGGCGACTAACAATGTGCAaaccaccagcaacaacaacagcagcagcaacagcactgATCTCTTAAAACTGCTCTCGGAAAGCGAAATTGAGAATCTACTGGAGCTTATGATGGAGGGCGATTTGTTAGAGGTATCACTGGATGAGACGCACGAGCTGTGGCGCATACTGGAAACGATGCCGCCGACAACGCTGCAAGCTGAGGCAAAATCACGTGTCGCTCAACATTTGCAACAGcaccgacagcagcagcagcaaatccaGGCGACAACAGGCACACTGGCAACAACCACTTCATCCAGCATACACAGCGGCGCTGAGGATTCCAATGATAGCCTGCTTGTCCAAAATAGTCCGAGTCCCGGCGCTGGCAGCGGCGCGGCGCAGACGGGAGTGCGCAATAAAAAACGTCGCTCCAATGATGCCAGCAGCGCCAATGTGGCTGTGCCGCGCAAGAAACAGAATACGCCCAAACAGACGCCGGGCAAAAAGTCGCAAGCGGTGCGCAAAAGTGACAGCAAGGCGAGCAGCTCGCCCGGCGTCGATGCGGATGCGGAGAACAAGCAGGCAAACGGTGGCAatacaacggcaacaacaccAACGACACCGGGCGCAGCGACACCAGCAGCTGGCGCCACGCCCATACCGGCATCCGGCCACAAGAAGCGCAAACGcaccacaacaacatcagcaacaacaacaacaaacaataataataacaataacaataacaccAGCACCAACAACGGCAGCGACAATGCCGGCAGCACACCCACCACAACGGGAAACAATAATCCAACAAcaggtggtgctggtggtggcggcggcggccagAAAAAGCATGCGCAACGCACACAGCAAACGGCACAGGAGGACGACGAAGAGGAATGCCGTGCCGAGAATTGCCATAAGCCAACCGGACGTGAGGTGGACTGGGTGCAATGCGATGGCGGCTGCAACGAATGGTTTCACATGTACTGTGTGGGCCTGAATCGTAGTCAAATTAAGGCCGACGATGATTACATTTGTATTCGCTGCTCGAAAACGGTcagcgtcggcgtcgccggcggcagcagcagtctAACGGTGACCACAACGACAACCAGCAGCCTGACACTGAGCACAGGAACGCCAGGGAAGCAGCGAGCAGCGCAGTCGGCGCGGTAG
Protein Sequence
MSAKAEADNLAASATGGGPGGGNSNSNGTVTPARRLRTRNSTGGSGSESAKKNTNNSNHNNNNNNINNNNNNNNNNESAATGNDGSAATTGIMPTSVGGGGGAATGGGGAAATGATPSSAERPMPSVPMNHASSSVSASKKYHNSCPHPTPTVHKKSLHTKPHSSNKFDQGKNEEFHFDTPPECPVFRPTAEEFKNPLAYISKIRSIAEKCGIAKILPPEKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPGSAPTAVNATPVKLEDVGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNASCGLTTVKPGSAAVTIKTETKEDFKRDLLSSFNAVNAAGGGAAGVGQSAGCGATTPAPNTRATQKKASTEPQQPLIDPLMKYICHICNRGDVEECMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERADSQLQLSLEALEENDLETLINEGSSLRIELQQLDQLQKRLKQCKWYKRSQGLRETSSKLTYKDVKNLLHTAAADLDPTDPYVDREMRKLQQIGAAIEAWESQAAKYFRRLNQQHELAEIEQFLKSASEINGQVPSHGVLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIDRGLNIPIQLEELGRMQGHLSSAHQWKENTARAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFKDDFLKDKNPAEIVASFKHAEEQELRDMRDLRRQNMTKNPLRDVFCLCKSEFRGLMHNCQLCRDWFHEDCVPPVPDAQPLMVQQNGNGNGGAINGGGASMPAQDKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILAQHQKRRTESTSCGAAVLGNISSPRKPRRTHNLSKQEANNAGRSESDNEDNGDDVDDDDDDDECRLRIVEDGYSNDEDEQLPRLATNNVQTTSNNNSSSNSTDLLKLLSESEIENLLELMMEGDLLEVSLDETHELWRILETMPPTTLQAEAKSRVAQHLQQHRQQQQQIQATTGTLATTTSSSIHSGAEDSNDSLLVQNSPSPGAGSGAAQTGVRNKKRRSNDASSANVAVPRKKQNTPKQTPGKKSQAVRKSDSKASSSPGVDADAENKQANGGNTTATTPTTPGAATPAAGATPIPASGHKKRKRTTTTSATTTTNNNNNNNNNTSTNNGSDNAGSTPTTTGNNNPTTGGAGGGGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVAGGSSSLTVTTTTTSSLTLSTGTPGKQRAAQSAR