Basic Information

Gene Symbol
Kdm5
Assembly
GCA_018904325.1
Location
JAEIFX010001243.1:8022227-8028517[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-26 3.2e-23 81.8 0.1 2 89 247 330 246 330 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAAGCAGAGGTGGACCATCCACTCGCCAGCGCCGGCGGCACAGCGAGCGGCGGCGTCAATAGCAACTCCAATGGGACTATAACCCCGGCGAGGCGGCTGCGCACACGCAACTCAACCGGCAGTGGCAGCGAGTCGGCTAAAAAGAATACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTGGAACGGCATCAAACACAACGCCTGCATCAGGAGGTTCAGCTGCATTAGCTGCTGCGGCTGCACCACCACCCATCTCTGTGGAGCGTCCCATGCCCAGCGTGCCGATGAATCATGCCAGCAGCAGTGTCTCAGCGAGTAAGAAATATCACAATAGCTGTCCGCATCCAACGCCCTCGGTGCACAAGAAGACGCTCCACACGAAGCCGCACAGCAGCAATAAATTTGATCAGAACAAGAACGAAGAATTCCATTTTGATACGCCGTCCGAGTGTCCAGTTTTTAGACCCACAGTGGAGGAGTTTAAAAATCCATTGGCCTACATCAGCAAGATACGCTCGATAGCGGAGAAATGTGGCATTGCCAAGATATTACCGCCGGAGAAATGGTCGCCGCCATTTGCCGTCGATGTGGACAAATTGCGTTTTGTGCCGCGCGTTCAACGCCTCAACGAACTCGAGGCGAAGACGCGCGTCAAACTAAACTTCTTGGATCAAATTGCCAAGTTCTGGGAGCTGCAGGGCTCCTCACTCAAAATACCGATGGTGGAGCGCAAGGCACTCGATTTATATACGCTGCATCGCATCGTTCAGGAGGAGGGTGGCATGGAGCAGACCACCAAGGAGCGCAAATGGGCCAAGGTCGCCAATCGCATGCAATATCCATCCAGCAAAAGCGTTGGCGCCACACTCAAAGCCCACTACGAGCGCATACTGCATCCATTCGAGGTGTACACTTCCGGCAAAGTGCTGGGAACGGGTGCTGGTGCCGGCGTAGCTGCGGGCGCTACACCCGTCAAGCTCGAGGATGTCGGCACCGATTACAAGGCCCATGAAATACCCACACGGCAGCAGATCGCGCCCCCAAACGAGAACAATACGCGTCGCTCTAAACGTTTTGGCAACTCCAATGCCGGTTGCGGCTTGAGCAATGCCAAACTGGGATGTGCTGCTGCCAATGCTGCTGCAGCAGCTGCTGCTTCGTGTACAATCAAAACGGAAACCAAGGAAGACTTCAAACGCGACCTTTTGAGCAGTTTCAATGCGGTCAATTCGCCAGCTGGCAGCGGTGGTGCGGCTGCGGGCGGTCAGTCTGCTGGCAGTGGTGCTCCACCCAATACACGCGCCACCCAGAAGAAGGCCACAACAGAGCCACAACAGCAGCCCATCATCGATCCGCTGATGAAGTACATCTGTCACATCTGCAATCGTGGCGATGTCGAGGAGTCCATGCTGCTGTGTGATGGCTGCGATGATAGCTATCATACGTTCTGTCTATTGCCACCACTGAGCAGCATACCCAAAGGAGAATGGCTATGTCCGCGTTGCGTTGTGGAGGAGGTAAGCAAGCCGCAGGAAGCATTTGGTTTCGAGCAGGCCGAGCGTGAGTACACGTTGCAGCAGTTTGGTCAAATGGCCGATCAGTTTAAGCAGGAGTACTTCCGGAAACCGGTGCACTTGGTGCCCACGGAGATGGTGGAGCGTGAGTTCTGGCGCATTGTATCCTCAATTGATGAAGATGTGACCGTTGAATATGGCGCCGATTTGCATACAATGGATCATGGTTCTGGTTTTCCCACAAAGAGTTCGCATTACTTGCTGCCCGGCGATCAGGAGTATGCCGAGTCTAGCTGGAATTTAAATAATCTACCGCTGCTGGAAGATTCAATACTGGGTCACATAAATGCTGACATTAGTGGCATGAATGCTCCATGGATGTATGTGGGCATGTGTTTCGCTGCCTTCTGCTGGCACAACGAGGATCATTGGAGCTATTCGATTAACTATTTGCATTGGGGCGAGCCAAAGACCTGGTACGGTGTGCCCGGCTCCCGGGCCGAGCAATTCGAGGAGACAATGAAACGTGCTGCACCTGAGCTCTTCTCCTCGCAGCCAGATCTGCTGCACCAGTTGGTGACCATAATGAATCCGAACATACTGATGAACAACGGGGTGCCCGTCTATCGCACCGATCAGCATGCCGGCGAGTTTGTCATCACATTTCCGCGCGCCTATCATGCCGGCTTCAATCAGGGCTATAATTTCGCCGAAGCTGTCAATTTTGCGCCAGCCGATTGGCTGAAAATGGGACGCGAATGCGTCAATCATTATTCGATGCTGCGTCGCTTCTGCGTTTTCTCGCACGATGAACTTGTCTGCAAGATGGCCTTGGAGCCCGCCAAGCTGACATTTGGTATTGCCACCGCTTGCTATATTGATATGGCCGAAATGGTTGACACCGAGAAGAAGCTGCGCAAATCTCTGCTGGAATGGGGCGTAACACGCGCCGAACGGCGCGCCTTCGAGCTGGTCAACGATGATGAGCGCCATTGCCAGGAGTGCAACACCACCTGCTTCCTTTCGGCCGTTGCCTGCGAGTGCAACGACAAACTGATTGTCTGCCTGCGCCACTACACCGTTCTCTGTGGCTGCGCACCAGAGAATCACACGCTCATCTATCGCTATACCCTCGACGAGATGCCGCTAATGCTGCAAAAGCTGAAAGTGAAGGCGCACAGCTTTGAGCGTTGGCTATCGCGTTGTCGCGACATTGTTGATGCCCACACGCCCACATCGGTGACGCTGTCGGAGCTGCAGGAACTCTGCAAGGAGGCCGAGACAAAGAAGTTTCCCTCATCGCTGCTCATCGATCGTCTGAATGCAGCAGCCATTGAGGCCGAGAAGTGCGTCACTGTCATCCAGCAGCTGGGCATCAATAAGGTACGCACCCGCTCCGATCACAATCAGGAGGCGGCACAGTATAAGCTGACCATGGAGGAACTGGAGTTGTTTGTACAGGAAATCGATAATTTGTGCTGCATCATTGATGAGGGCGCGTCGGTGCGTGAGCTATTGGTGTTGGGCAAACAGTTTGTGGAGCGGGCCAAGGCGCAGTTGCAGTTGTCGCTGGAGGCCCTCGAGGAGAATGAACTGGAGACGCTGATCAATGAGGGCAGCTCGTTGCGCATTGAACTGCAGCAACTGGATCAGCTGCAGAAGCGTCTGAAACAATGCAAATGGTACAAACGCTCTCAGGGCTTGCGCGAGACCAGCTCCAAGCTGACCTACAAAGATGTTGAGACGCTGCTGCATACCGCCGCCGCTGATTTGGATCCCACCGATCCCTATGTGGATCGCGAGATGCGTAAATTGCAAACAATTGGTGCGGAAATCGAGGCATGGGAATCGCAGGCAGCCAAATATTTCCGTCGTCTCAATCAGCAGCACGAGCTAACCGAGATCGACCAGTTTCTGAAGTCCGCCAGCGATATCAACGGGCAGGTGCCATCGCATGGCATGTTGAAGGATGCGTTGCGCAAGGCACGCGAATGGCTGCGCGCCGTTGAGCAGCTGCAGCAGAACAATCATGTCACCTATTGCCACACGCTGGAGGCGATGATCGAACGGGGCCTGAGTATACCCATCCAGCTGGAGGAATTGGGTCGCATGCAGGGACATTTGACTAGTGCACACCAGTGGAAGGAGAACACGGCGCGGGCGTTCCTGAAGAAGGGCACATTCTATACGCTGCTGGAGGTGCTGATGCCGCGTGCGGATGCCATTAATATTGACTCGGATCTCAAGCCGCGTTTCCAAGATGATTTCCTCAAGGACAAGAATCCCGCCGAAATTGTGGCCAGCTTCAAGCAAGCCGAGGAGCAGGAGCTGCGCGATATGCGCGATCTTCGACGCCAGAATATGACCAAGAATCCACTGCGCGACGTCTTCTGCTTGTGCAAATCGGAATTCCGTGGTCTAATGCACAATTGCCAGCTGTGCCGCGATTGGTTTCACGAGGATTGCGTGCCGCCGCCGCCGCTTCCAATAGCAGCGCAACAGAATGGCAATGCGGATGCTTCCAAGTCAGCGCAGGCAAAGTGGCTGTGTCCCAGTTGCGTGCGCTCGAAGCGTCCACGTTTGGAGATGATTTTGCCACTGCTCGTCCAGCTGCAACAGCTGCCCATCCGCCTGCCCGAGGACGAGGCATTGCGCTGTTTGGCTGAGCGTGCCATGAACTGGCAGGATCGTGCACGCAAAGCTCTAAGCAGTCCCGATGTCAGCGCCGCCCTGGATGCCATCTTGTTGCAACAGCAGAAGCGACGCACTGAGAGCGGCAGCGGTGGCGCCGCCGCTGTCCTGGGCAATATCAACAGTCCAAGAAAGCCGCGACGTCAGCACAAGCAGCAGGGCGCGAACAATACCACGGGTCGTTCCGATTCGGATGCTGAGGATGTAGATGATGTTGACGATGACGACGATGATGATGAATGCCGGCTGCGCATTGTGGAGGACGGCTATAGCAACGATGAGGACGAGCAGCTGCCGCGTTTGGCATCAACGAATCAAGCGAATCAAACCAGCAGCAGCAGCACTACAGATCTCCTCAAGCTGCTCTCCGACAGCGAAATTGAGAATCTGCTCGAGCTGATGATGGAGGGTGATTTGTTGGAGGTGTCGCTCGAAGAGACGCAAGAGCTGTGGCGCATTCTCGAAACAATGCCGCCGACAATGTTGCAAGCGGACGCCAAGGCTCGCGTCGCTCAGCATGTGCAGCAGCAGCAGTTGCAACAGGGTGCGAATGCATCAGCCACAGGCACCTCGACGTCGAGCATACACAGTGGCGCCGATGATTCCAATGATAGCCTGCTTGTTCAGAATAGTCCAAGTCCCAACGCTCAAGCGGTGCGCAACAAGAAGCGACGCTCCAATGACTCCAGCAGCGCCAATGTGGCTGTGCCGCGCAAGAAACAGAATACGCCCAAGCAGACGCCGGGCAAAAAGTCGCAAGCGGTGCGCAAAAGCGATAGCAAGGCAAGCAGCTCGCCCGGCGTCGATGCCGATGCCGAAAACAAGCAGGCAAATGGTGGCAATACCAAAACAACAACAGCCACAACAATTACAACACCAACAACGCCGGGATCAGCATCAGTTGCAGCAGCAACAGTTGCAGACACTGGCGCAACAGCGACAGGCGCAGCTGGCACACCAACACCGGGCTCAGCTGGGCACAAGAAACGCAAGCGCACCACCACCACAAACAACAACACCAATAATAATAATAACAACAACAGCAGCAACAACAGTGGCAACAATAGCAATGCAGGCGGCACACCCACAGCAGGCTCCAACAATAGTCCGTCAACAGGTGGCGCTGGCAGCGGGCAGAAGAAGCATGCGCAACGAACACAGCAAACGGCGCAGGAGGATGACGAGGAGGAGTGCCGAGCAGAGAATTGTCATAAGCCAACGGGACGCGAGGTGGACTGGGTGCAGTGCGACGGTGGCTGCAACGAATGGTTTCACATGTACTGTGTGGGCCTAAATCGTAGCCAGATCAAAGCTGACGATGATTACATATGCATACGCTGTTCCAAGACGGTCAGCGTAGGCGTCACTGGGGGCAGCGGCAGTCTAACCGTTACCACTACGACGACCAGCAGCCTAACGTTAAGCACGGGGACGCCGGGCAAGCAGCGAGCAGCGCAATCGGCGCGGTAA
Protein Sequence
MSAKAEVDHPLASAGGTASGGVNSNSNGTITPARRLRTRNSTGSGSESAKKNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTASNTTPASGGSAALAAAAAPPPISVERPMPSVPMNHASSSVSASKKYHNSCPHPTPSVHKKTLHTKPHSSNKFDQNKNEEFHFDTPSECPVFRPTVEEFKNPLAYISKIRSIAEKCGIAKILPPEKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGTGAGAGVAAGATPVKLEDVGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNAGCGLSNAKLGCAAANAAAAAAASCTIKTETKEDFKRDLLSSFNAVNSPAGSGGAAAGGQSAGSGAPPNTRATQKKATTEPQQQPIIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPENHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVERAKAQLQLSLEALEENELETLINEGSSLRIELQQLDQLQKRLKQCKWYKRSQGLRETSSKLTYKDVETLLHTAAADLDPTDPYVDREMRKLQTIGAEIEAWESQAAKYFRRLNQQHELTEIDQFLKSASDINGQVPSHGMLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLSIPIQLEELGRMQGHLTSAHQWKENTARAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKDKNPAEIVASFKQAEEQELRDMRDLRRQNMTKNPLRDVFCLCKSEFRGLMHNCQLCRDWFHEDCVPPPPLPIAAQQNGNADASKSAQAKWLCPSCVRSKRPRLEMILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILLQQQKRRTESGSGGAAAVLGNINSPRKPRRQHKQQGANNTTGRSDSDAEDVDDVDDDDDDDECRLRIVEDGYSNDEDEQLPRLASTNQANQTSSSSTTDLLKLLSDSEIENLLELMMEGDLLEVSLEETQELWRILETMPPTMLQADAKARVAQHVQQQQLQQGANASATGTSTSSIHSGADDSNDSLLVQNSPSPNAQAVRNKKRRSNDSSSANVAVPRKKQNTPKQTPGKKSQAVRKSDSKASSSPGVDADAENKQANGGNTKTTTATTITTPTTPGSASVAAATVADTGATATGAAGTPTPGSAGHKKRKRTTTTNNNTNNNNNNNSSNNSGNNSNAGGTPTAGSNNSPSTGGAGSGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVTGGSGSLTVTTTTTSSLTLSTGTPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530050;
90% Identity
iTF_00570179;
80% Identity
-