Basic Information

Gene Symbol
Kdm5
Assembly
GCA_035046225.1
Location
JAWNOD010000072.1:6573674-6580497[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.6e-26 8.3e-23 80.5 0.1 2 89 245 328 244 328 0.95

Sequence Information

Coding Sequence
ATGTCCGGCAAAGCCGAGGCGGACAGTCTAGccgccagcggcggcggcacaggAGGCGCCAATAGCAACTCCAATGGCACCGTGACGCCGGCGCGACGCCTGCGCACCCGCAACTCgaccggcagcggcagcgagtcGGCCAAGAAGaataccaacaacagcagccacaataataataataatattagcaacaacaacagcaacaacaataataataataacgaaTCAACTGCAACGGGAAATGATGGCTCGTCGGCGTCGACGGGCATATCGATGGCAGCATCAGCTGGCGGTGGTGCCGGCTCTGGCACGCCAATTTCAGCGCCACCCATCGCCGTGGAACGCCCCATGCCCAGCGTGCCGATGAAccatgccagcagcagcgtttCGGCCAGCAAGAAGTACCACAACAGCTGCCCGCATCCGACGCCGACGGTGCACAAGAAATCGTTGCACACGAAgccgcacagcagcaacaagttcGATCAGGGCAAGAACGAGGAGTTCCACTTTGATACGCCGCCCGAGTGTCCAGTATTTCGGCCGACGGCGGAGGAGTTCAAGAATCCATTGGCATACATCAGCAAGATACGCTCCATAGCGGAGAAGTGTGGCATCGCCAAGATCCTGCCGCCGGACAAGTGGTCGCCGCCATTCGCCGTCGATGTGGATAAGTTGCGCTTTGTGCCGCGCGTGCAGCGGCTCAACGAGCTGGAGGCGAAGACGCgcgtcaaattgaatttcttggATCACATTGCCAAGTTCTGGGAGCTGCAGGGCTCCTCGCTGAAAATCCCGATGGTGGAACGCAAAGCTCTCGATCTATACACGTTACATCGCATCGTGCAGGAGGAGGGTGGCATGGAGCAGACCACCAAGGAGCGCAAATGGGCCAAGGTGGCCAATCGCATGCAGTATCCATCCAGCAAAAGTGTTGGCGCCACCCTCAAGGCCCACTACGAGCGTATTCTGCATCCGTTCGAGGTCTACACGTCGGGCAAAGTGCTGGGACCCAATGCGGCGGCCTCTACAGTTGGCGCAACGCCCGTCAAGCTCGAGGATGCGGGCACCGATTACAAGGCCCACGAGATACCCACGCGTCAGCAGATTGCGCCGCCCAATGAGAATAATACGCGTCGCTCCAAGCGCTTCGGCAACTCGAATGCCAGCTGCGGCCTGAACACCAAGCCGGGCGCAGCTGCCATTACCATTAAGACGGAAACCAAGGAGGATTTCAAGCGCGATCTATTGAGCAGCTTTAACGCTGTCAATGCGGGCGCCACAACCAACGCTGGTCAATCGGGCGGCTGTGGAGCTGCCACACCGAATACACGCGCCACCCAAAAGAAGGCGACGacagagctgcagcagccgctcatCGATCCGCTGATGAAGTACATCTGTCATATCTGCAATCGCGGCGACGTCGAGGAGTCAATGCTGCTCTGCGACGGCTGCGACGATAGCTATCACACCTTCTGCCTGCTGCCACCGCTGAGCAGCATACCCAAAGGTGAATGGCTTTGCCCGCGCTGCGTTGTGGAGGAGGTGAGCAAGCCGCAGGAAGCGTTTGGTTTCGAGCAGGCCGAGCGGGAGTacacgctgcagcagttcGGCCAGATGGCGGATCAGTTCAAGCAGGAATACTTTCGGAAGCCGGTGCACCTGGTGCCCACGGAGATGGTGGAGCGTGAATTTTGGCGCATCGTATCGTCTATTGATGAGGATGTGACTGTGGAATATGGCGCCGATCTGCATACCATGGATCACGGCTCGGGCTTTCCCACGAAGAGCTCGCACTATTTGTTGCCCGGCGATCAGGAGTACGCCGAGTCGAGCTGGAATTTGAATAatctgccgctgctggaggATTCGATACTGGGGCACATTAATGCCGATATCAGCGGCATGAATGCGCCGTGGATGTATGTGGGCATGTGCTTTGCTGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTACTCGATTAACTATTTGCACTGGGGCGAGCCGAAGACCTGGTACGGTGTGCCCGGCTCCTGTGCCGAGCAGTTCGAGGAAACGATGAAGCGCGCCGCGCCCGAGCTCTTCTCCTCGCAGCCCGATCTACTGCATCAGCTGGTGACCATTATGAATCCCAACATTTTGATGAACAACGGTGTGCCCGTCTTTCGCACCGATCAGCATGCGGGCGAGTTTGTAATCACCTTTCCGCGCGCCTACCACGCCGGCTTCAATCAGGGCTACAACTTCGCCGAGGCCGTCAATTTCGCGCCCGCGGATTGGCTGAAGATGGGACGCGAGTGCGTCAATCATTATTCGATGCTGCGTCGCTTCTGCGTCTTCTCGCACGACGAGCTCGTGTGCAAGATGGCGCTGGAGCCGGCCAAGCTGACGTTTGGCATTGCCACCGCCTGCTACATCGACATGGCCGAAATGGTGGACACCGAGAAGAAGCTGCGCAAATCCCTGCTAGAGTGGGGCGTCACACGCGCCGAACGGCGCGCCTTCGAGCTGGTCAACGATGACGAGCGCCATTGCCAGGAGTGCAATACGACGTGCTTCCTGTCGGCCGTCGCCTGCGAGTGCAACGACAAGCTGATCGTCTGCCTGCGCCACTACACCGTGCTCTGTGGCTGTGCGCCCGAGAAGCACACGCTCATCTATCGCTACACGCTGGACGAGATGCCGCTGATGCTGCAAAAGCTGAAGGTGAAGGCGCACAGCTTCGAGCGCTGGCTGTCACGCTGCCGCGACATTGTCgacgcccacacgcccaccTCGGTGACGCTGTCCGAGCTGCAGGAGCTCTGCAAGGAGGCGGAGACCAAAAAGTTCCCTTCATCGCTGCTCATTGATCGACTCAATGCGGCGGCCATAGAGGCGGAGAAGTGCGTCACAGTCATACAACAATTGGGCATAAATAAGGTGCGTACCCGTTCCGATCACAATCAGGAGGCAGCCCAGTATAAGCTGACCatggaggagctggagctgtttGTGCAGGAAATCGACAATCTGTGCTGCATCATCGACGAGGGCGCCTCGGTGCGTGAGCTCTTGGTGCTCGGCCGGCAGTTTGTGGAGCGCGCCGACAACCAGTTGCAGCTGACACTGGAGGCGCTGGAGGAGAACGAGCTGGAGACGCTGATCAATGAGGGCAGCTCGCTGCGCatcgagctgcagcagttggaTCACCTGCAGAAGCGTCTCAAGCAGTGCAAATGGTACAAACGCTCGCAGGGCTTGCGCGAGACCAGCTCGAAGCTGACCTACAACGACGTGAAGACTCTGCTGCACACGGCAGCCGCCGATCTGGATCCCACGGATCCCTATGTGGATCGTGAGATGCGCAAATTGCAGCAGATTGGCGCGGCGATCGAGGCGTGGGAATCGCAGGCCGCCAAATATTTCCGGCGACTCAATCAGCAGCATGAGCTGGCCGAGATCGAGCAGTTTCTGAAGTCCGCCACGGAAATCAATGGGCAGGTGCCGTCGCATGGCATACTGAAGGATGCGCTGCGCAAGGCACGCGAGTGGCTGCGCtcggtggagcagctgcagcagaacaATCATGTCACCTACTGTCACACGCTGGAGGCGATGATTGACCGGGGCCTCAGCATACCCATTCAGCTGGAGGAGCTCGGTCGCATGCAGGGTCATCTGAATAGTGCCCATCAGTGGAAGGATAATACGGCACGGGCGTTCCTGAAGAAGGACACATACTACACGCTGCTGGAGGTGCTGATGCCACGAGCAGATGCCATCAATATCGACTCGGATCTCAAGCAGCGTTTCCAAGATGATTTCCTAAAGGACAAGAACCCCGCCGAAATCGTGGCCAGCTTCAAGCAGGCCGAGGAGAAGGAGTTGCGCGACATGCGCGACCTCCGGCGCCAGAACATGTCCAAGAATCCACTGCGCGACGAATTCTGCCTGTGCAAGCTCGAGTTCCGTGGCCTGATGCACAATTGCCAGCTGTGCCGCGATTGGTTCCACGAGGACTGCGTGCCCCCGCCGCCCCACGCGCAGATGGTGCAGCagaacggcaatggcaatggcaacggcaacggcggtGGTGCAGTCAATGGCGGAGCAGCATCGGCGCTGCCGTCGCAACCCAAGTGGCTATGTCCGAGCTGTGTGCGCTCGAAGCGTCCACGCCTGGAGACCATTTTGCCGCTGCTCGTgcagctgcagaagctgcCGATTCGTCTACCTGAGGATGAGGCGTTGCGTTGCCTGGCGGAGCGTGCAATGAACTGGCAGGATCGTGCCCGCAAGGCGCTCAGCAGTCCCGACGTGAGCGCCGCTCTGGACGCCATCTTggcccagcagcagaagcGACGCTCCGAGAGCAGCAATTGTGCCGCCGTCCTGGGCAACATAAATAGTCCACGCAAGCCGAGGCGTTCGCACAACTTGTCCAAGCCGGAGAGCAACAATACGGGCCGCTCCGAGTCGGACAACGAGGATGGGGACGATGtggatgacgacgacgacgacgatgaatGCCGGCTACGGATTGTGGAGGACGGATACAGCAACGATGAGGACGAGCAGCTGCCGCGATTGGGCCAGGGCAATGCGCAAACGAAtgccagcagcggcggcagcaccgATCTCCTGAAGCTGCTCTCCGACAGCGAAATTGAGAATCTGCTCGAGCTTATGATGGAGGGCGATCTGCTGGAGGTGTCGCTGGATGAGACGCAGGAGCTGTGGCGCATACTGGAGACGATACCGCCCACGCCGCTGCAGGCCGAGGCGAAGGCGCGCGTGGCGCAGTACTTGCAGCAGcatcgccagcagcagcagcagaaccaGGTGACATCGACGACGCTGACCACCTCGTCCAGCATACACAGCGGCGCCGAGGATTCCAACGATAGCCTGCTCGTGCAAAACAGTCCAAGTcccggcgctggcagcgccggCGGCCAGGCGGGGCGCAACAAGAAGCGACGCTCCAACGATGCGAGCAGCGCCAACGTGGCGGTGCCGCGCAAGAAACAGAATACGCCCAAGCAGACGCCTGGCAAGAAGACGCCGGCGGCGGTGCGCAAGAGCGACAGCAAGGCGAGCAGCTCGCCCGGCGTCGATGCCGATGCGGAGAACAAGCAGGCGAATGGTGGcaacacgacgacgacgacgacggcgacgccaaCGACGCCGGGTGGAGCGACGGCcggtgcggcggcggcgacggcgtcaGCGACCACGCCCATACCAGCGGGTGGGCACAAGAAGCGCAAGCGcaccacaacaaccacaaacaacaacaacaacaataataacaacaacagcagcagcaacaatagcaacgcAGGCGGAGGTGGAACTggtggcggaggcggcggcacACCCACCGCTGGCAACAACAGTCCGGCAAcaggtggcggcggcggccagaAGAAGCACGCGCAGCGCACACAGCAGACGGCGcaggaggacgacgaggaggagtgCCGGGCCGAGAATTGCCATAAGCCGACGGGGCGCGAGGTGGACTGGGTGCAATGCGATGGCGGCTGCAACGAGTGGTTCCACATGTACTGCGTGGGCCTGAATCGCAGCCAGATAAAGGCGGACGACGATTACATCTGCATACGCTGCTCGAAGACGGtcagcgtgggcgtggccggcggcagcagcagcctgacGGTGACCACGACGACGACCAGCAGCCTGACGTTGGGCACAGCGACGCCGGGGAAGCAGCGAGCGGCGCAGTCGGCGCGGTAG
Protein Sequence
MSGKAEADSLAASGGGTGGANSNSNGTVTPARRLRTRNSTGSGSESAKKNTNNSSHNNNNNISNNNSNNNNNNNESTATGNDGSSASTGISMAASAGGGAGSGTPISAPPIAVERPMPSVPMNHASSSVSASKKYHNSCPHPTPTVHKKSLHTKPHSSNKFDQGKNEEFHFDTPPECPVFRPTAEEFKNPLAYISKIRSIAEKCGIAKILPPDKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDHIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPNAAASTVGATPVKLEDAGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNASCGLNTKPGAAAITIKTETKEDFKRDLLSSFNAVNAGATTNAGQSGGCGAATPNTRATQKKATTELQQPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERADNQLQLTLEALEENELETLINEGSSLRIELQQLDHLQKRLKQCKWYKRSQGLRETSSKLTYNDVKTLLHTAAADLDPTDPYVDREMRKLQQIGAAIEAWESQAAKYFRRLNQQHELAEIEQFLKSATEINGQVPSHGILKDALRKAREWLRSVEQLQQNNHVTYCHTLEAMIDRGLSIPIQLEELGRMQGHLNSAHQWKDNTARAFLKKDTYYTLLEVLMPRADAINIDSDLKQRFQDDFLKDKNPAEIVASFKQAEEKELRDMRDLRRQNMSKNPLRDEFCLCKLEFRGLMHNCQLCRDWFHEDCVPPPPHAQMVQQNGNGNGNGNGGGAVNGGAASALPSQPKWLCPSCVRSKRPRLETILPLLVQLQKLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILAQQQKRRSESSNCAAVLGNINSPRKPRRSHNLSKPESNNTGRSESDNEDGDDVDDDDDDDECRLRIVEDGYSNDEDEQLPRLGQGNAQTNASSGGSTDLLKLLSDSEIENLLELMMEGDLLEVSLDETQELWRILETIPPTPLQAEAKARVAQYLQQHRQQQQQNQVTSTTLTTSSSIHSGAEDSNDSLLVQNSPSPGAGSAGGQAGRNKKRRSNDASSANVAVPRKKQNTPKQTPGKKTPAAVRKSDSKASSSPGVDADAENKQANGGNTTTTTTATPTTPGGATAGAAAATASATTPIPAGGHKKRKRTTTTTNNNNNNNNNNSSSNNSNAGGGGTGGGGGGTPTAGNNSPATGGGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVAGGSSSLTVTTTTTSSLTLGTATPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530050;
90% Identity
iTF_00493427;
80% Identity
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