Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_035045825.1
Location
JAWNOT010000045.1:1227175-1233302[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-26 8.9e-23 80.5 0.1 2 89 244 327 243 327 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAAGCCGAGGCGGACAATTTAGCCGCCAGCGGTGGCGGCACAGGAGGCGCCAATAGCAACTCCAATGGCACCGTAACACCAGCGCGACGCCTGCGCACCCGCAACTCAACCGGAAGTGGCAGCGAGTCGGCCAAAAAGAATacaaacagcagccacaataacaataataatattaataacaacaacagcaacaacaataacgaatCAGCTGCAACGGGAAATGATGGTTCATCAGCGTCGACAGGAATATCGATGCCAACATCAGCTGGTGGTGGTAGCAGCGGTGCAGGCTCTGGCACTCCAATATCAGCGCCACCCAGCTCCGTAGAACGTCCCATGCCCAGCGTGCCGATGAAtcatgccagcagcagcgtgtCGGCCAGCAAGAAATATCACAACAGCTGTCCACATCCAACGCCTACGGTGCACAAAAAATCGTTGCATACGAAGCCGCATAGCAGTAATAAATTCGATCAGGGCAAGAACGAGGAATTCCATTTTGATACACCGCCCGAGTGCCCAGTATTTCGGCCGACAGCGGAAGAGTTTAAGAATCCATTGGCATACATTAGCAAGATTCGACCCATAGCAGAAAAATGTGGCATTGCCAAGATCTTACCACCTGATAAATGGTCACCGCCATTTGCCGTCGATGTTGACAAGCTGCGCTTTGTGCCGCGCGTGCAGCGACTTAACGAACTGGAGGCAAAGACGCGtgtcaaattgaatttcttggATCACATTGCCAAGTTTTGGGAGCTGCAAGGCTCCTCTCTAAAAATCCCGATGGTAGAGCGTAAAGCCCTAGATCTATATACGTTACATCGCATCGTACAGGAGGAGGGTGGCATGGAGCAGACCACCAAGGAGCGCAAATGGGCCAAAGTAGCCAATCGTATGCAGTATCCATCCAGCAAAAGTGTGGGCGCCACACTAAAAGCCCATTACGAACGTATTCTGCATCCGTTTGAGGTGTACACGTCGGGCAAAGTATTGGGACCTAATGCGGCAGCTTCTACAGTAAACGCAACGCCCGTCAAGCTCGAGGATGCCGGCACAGATTATAAGGCCCATGAGATACCCACACGTCAGCAAATCGCGCCGCCCAATGAGAACAATACGCGTCGCTCAAAGCGCTTTGGCAACTCGAATGCAAGTTGCGGCCTAAACACCAAGCCAGGTGCGGCTGCCATTACCATTAAAACTGAAACCAAGGAGGATTTCAAGCGCGACCTATTGAGCAGTTTTAATGCTGTCAATGCGGGTGCCGCTGCGGGTGCTGGCCAATCAGCTGGCTGCGGAGCTACACCGAATACGCGCGCCACCCAAAAGAAAGCGACCACTGAGTTACAGCAGCCGCTTATCGATCCACTGATGAAGTACATCTGTCATATCTGCAATCGGGGCGATGTCGAAGAGTCAATGCTGCTCTGTGACGGGTGCGATGATAGCTATCATACCTTCTGCTTGCTACCACCATTGAGCAGCATACCGAAGGGTGAATGGCTTTGCCCGCGTTGCGTTGTGGAGGAGGTGAGCAAGCCGCAGGAAGCTTTTGGTTTCGAACAGGCCGAGCGAGAATACACCTTGCAGCAATTTGGCCAGATGGCCGATCAATTCAAGCAGGAATATTTTCGCAAACCGGTGCACTTGGTGCCCACGGAGCTGGTGGAGCGTGAATTTTGGCGCATTGTTTCGTCAATTGATGAGGATGTGACTGTGGAATATGGCGCAGATCTACATACAATGGATCACGGCTCCGGTTTTCCCACAAAGAGCTCACATTATTTGTTGCCCGGTGATCAGGAGTACGCCGAGTCCAGCTGGAATTTAAATAATCTTCCGTTGTTAGAGGATTCGATACTGGGACAcattaatgctgatattagCGGCATGAATGCGCCGTGGATGTATGTGGGCATGTGCTTTGCTGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCGATTAACTATTTGCACTGGGGCGAGCCAAAGACCTGGTACGGTGTGCCCGGCTCCTGTGCCGAGCAGTTTGAAGAAACGATGAAGCGTGCCGCTCCTGAGCTCTTCTCCTCGCAGCCCGATCTACTGCATCAGCTGGTGACCATTATGAATCCCAACATATTAATGAACAATGGTGTGCCCGTCTTTCGCACCGATCAGCATGCTGGCGAATTTGTAATTACCTTTCCGCGCGCTTATCATGCTGGCTTCAATCAGGGCTACAATTTCGCCGAGGCCGTCAATTTTGCGCCCGCGGATTGGCTGAAAATGGGACGCGAATGCGTCAATCATTATTCAATGTTGCGTCGCTTCTGTGTCTTCTCGCACGACGAGCTCGTCTGCAAGATGGCGTTAGAGCCGGCCAAGTTGACGTTTGGCATTGCCACCGCCTGCTACATTGACATGGCCGAAATGGTTGACACCGAAAAGAAGCTGCGCAAATCTTTGCTGGAATGGGGCGTCACACGTGCCGAACGTCGCGCCTTCGAGCTGGTCAATGATGATGAGCGCCATTGCCAGGAGTGCAATACAACCTGCTTCCTATCGGCCGTTGCCTGCGAGTGCAACGACAAGCTGATTGTCTGCCTGCGCCACTATACTGTGCTCTGTGGCTGTGCGCCAGAGAAACATACGCTCATCTATCGCTATACGCTGGACGAGATGCCGCTGATGCTGCAAAAGTTGAAGGTTAAGGCGCACAGCTTTGAGCGCTGGCTGTCGCGTTGTCGCGACATTGTCGATGCCCACACTCCAACATCGGTTACCCTGTCCGAGCTGCAGGAGCTCTGCAAGGAAGCAGAGACCAAAAAGTTTCCTTCATCTCTGCTCATTGATCGACTCAATGCAGCGGCCATAGAGGCAGAGAAATGTGTTACAGTCATCCAACAACTGGGCATCAATAAGgtGCGCACCCGTTCCGATCACAATCAGGAGGCAGCACAATATAAACTGACCATggaggagctggagctgtTTGTACAGGAAATCGACAATCTGTGCTGCATTATCGATGAGGGTGCCTCGGTGCGTGAGCTTTTAGTGCTTGGTCGGCAATTTGTGGAACGTGCCGATAACCAGTTGCAGCAAACACTGGAGGCACTGGAGGAGAATGAGCTGGAGACGCTCATCAATGAGGGCAGCTCGTTGCGCattgagctgcagcagttggaTCATCTGCAGAAGCGTCTCAAGCAATGCAAATGGTACAAACGCTCCCAAGGCTTGCGCGAGACCAGCTCCAAGCTGACCTACAATGATGTGAAGACTCTGCTGCATACGGCAGCCGCTGATCTGGATCCAACAGATCCTTATGTGGATCGTGAGATGCGCAAGTTGCAGCAAATTGGTGCTGCGATCGAGGCATGGGAATCACAGGCAGCTAAATATTTCCGACGACTCAATCAACAGCACGAGCTGGCCGAGATTGAGCAGTTTCTGAAGTCCGCCACTGACATCAATGGGCAGGTGCCGTCGCATGGCATATTAAAGGATGCGTTGCGCAAGGCTCGCGAATGGCTGCGCTctgtggagcagctgcagcaaaacaATCATGTCACCTACTGTCATACGCTGGAGGCGATGATTGATCGCGGCCTCAGCATACCCATCCAGCTGGAGGAGCTCGGTCGCATGCAGGGCCATTTGAATAGTGCACATCAGTGGAAGGACAATACGGCACGTGCGTTCCTGAGGAAGGGCACATTCTATACGCTGCTGGAGGTGCTGATGCCGCGAGCAGATGCCATCAATATTGACTCGGATCTCAAGCCTCGTTTCCAAGATGATTTCCTCAAGGACAAGAACCCCGCCGAAATTGTGGCCAGCTTTAAGCATGCCGAGGAGCAGGAGTTGCGCGATATGCGCGACTTAAGACGCCAGAATATGTCAAAGAATCCATTACGAGATGTCTTCTGCCTGTGCAAGTCGGAATTTCGTGGTCTGATGCACAATTGTCAGCTGTGCCGTGATTGGTTCCACGAGGATTGTGTGCCACCGCTGCCCCAGTCACCGATGGTGCAACAAAATGGCAACGGTGGCGGTGCAATCAATGGCGGAGCATCATCAATGCCAGCCCAACCCAAATGGCTATGTCCGAGCTGTGTGCGCTCGAAGCGCCCACGCTTGGAGACAATTTTGCCGTTgcttgtgcagctgcagcagctgcccattCGTCTACCTGAGGATGAGGCGTTGCGTTGCCTGGCGGAGCGGGCAATGAATTGGCAAGATCGTGCCCGAAAGGCGCTAAGCAGTCCCGATGTGAGCGCCGCCCTGGATGCGATTTTGGCTCAACAGCAGAAGCGACGCTCGGAGAGCAGCAATTGTGCCGCCGTATTGGGCAATATAAGTAGTCCACGCAAGCCGAGACGTTCGCACAACCTGTCTAAGCAGGAAACCAATAACACGGGCCGCTCTGAGTCAGATAATGAGGATGGGGACGATGtggatgatgacgacgatgatgatgaatgCCGGCTACGCATTGTGGAGGACGGGTATAGCAATGATGAGGACGAACAGCTGCCGCGCTTGACTCAAAACAATGCGCaaaccaccagcagcagcagcactgatCTCTTGAAACTGCTCTCCGACAGCGAAATTGAGAACCTACTCGAGCTTATGATGGAGGGCGATTTACTAGAGGTATCGCTAGATGAGACGCAAGAGCTGTGGCGCATACTGGAAACAATACCGCCTACACCGCTGCAGGCCGAGGCTAAAGCGCGAGTGGCTCAGCACTTGCAACATCGTCAGCAGCAAAGTCAGGGAGCAGCGACGACACTGACCACCTCATCCAGCATACACAGCGGCGCTGAGGATTCCAATGATAGCCTACTCGTGCAAAATAGTCCAAGTCCcggcgctggcagcggcgCTCAGGCGGTGCGCAATAAGAAACGTCGCTCCAATGATGCGAGCAGCGCAAATGTTGCTGTGCCGCGCAAGAAACAAAATACGCCCAAACAGACGCCAGGCAAGAAGACACCAGCGGCGGTACGCAAGAGTGACAGCAAGGCGAGCAGTTCACCCGGTGTGGATGCCGATGCAGAGAATAAGCAGGCAAATGGTGGCAatacgacggcgacgacgccAACGACACCGGGCTcggcaacagctgttgctgcggcagcagcgacaacgcCTATACCAGCGGCCGGGCACAAGAAACGCAAACgcaccacaaccacaacaaacaacaacaataacaataacaacaacaacagcagcaacaatagcaatgcaggcgctggtggtggtggcagtGGCGGCGGCACACCTacagctggcagcaacaacaatccaGCAACAGGTGGCGGTCAAAAGAAGCATGCGCAACGCACACAGCAAACGGCACAGGAGGACGACGAAGAGGAATGCCGCGCCGAGAATTGCCATAAGCCCACAGGCCGTGAAGTGGATTGGGTGCAGTGCGACGGTGGCTGCAACGAATGGTTTCACATGTACTGTGTGGGCCTGAATCGCAGCCAGATAAAGGCCGATGatgattatatatgtatacgctGCTCCAAGACGGTCAGCGTGGGCGTTgccggtggcagcagcagtttaACGGTGACCACAACGACGACCAGCAGCCTAACGCTGAGCACAGGGACGCCGGGGaagcagcgagcagcgcaATCGGCGCGGTAG
Protein Sequence
MSAKAEADNLAASGGGTGGANSNSNGTVTPARRLRTRNSTGSGSESAKKNTNSSHNNNNNINNNNSNNNNESAATGNDGSSASTGISMPTSAGGGSSGAGSGTPISAPPSSVERPMPSVPMNHASSSVSASKKYHNSCPHPTPTVHKKSLHTKPHSSNKFDQGKNEEFHFDTPPECPVFRPTAEEFKNPLAYISKIRPIAEKCGIAKILPPDKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDHIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPNAAASTVNATPVKLEDAGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNASCGLNTKPGAAAITIKTETKEDFKRDLLSSFNAVNAGAAAGAGQSAGCGATPNTRATQKKATTELQQPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERADNQLQQTLEALEENELETLINEGSSLRIELQQLDHLQKRLKQCKWYKRSQGLRETSSKLTYNDVKTLLHTAAADLDPTDPYVDREMRKLQQIGAAIEAWESQAAKYFRRLNQQHELAEIEQFLKSATDINGQVPSHGILKDALRKAREWLRSVEQLQQNNHVTYCHTLEAMIDRGLSIPIQLEELGRMQGHLNSAHQWKDNTARAFLRKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKDKNPAEIVASFKHAEEQELRDMRDLRRQNMSKNPLRDVFCLCKSEFRGLMHNCQLCRDWFHEDCVPPLPQSPMVQQNGNGGGAINGGASSMPAQPKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILAQQQKRRSESSNCAAVLGNISSPRKPRRSHNLSKQETNNTGRSESDNEDGDDVDDDDDDDECRLRIVEDGYSNDEDEQLPRLTQNNAQTTSSSSTDLLKLLSDSEIENLLELMMEGDLLEVSLDETQELWRILETIPPTPLQAEAKARVAQHLQHRQQQSQGAATTLTTSSSIHSGAEDSNDSLLVQNSPSPGAGSGAQAVRNKKRRSNDASSANVAVPRKKQNTPKQTPGKKTPAAVRKSDSKASSSPGVDADAENKQANGGNTTATTPTTPGSATAVAAAAATTPIPAAGHKKRKRTTTTTNNNNNNNNNNSSNNSNAGAGGGGSGGGTPTAGSNNNPATGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVAGGSSSLTVTTTTTSSLTLSTGTPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530050;
90% Identity
iTF_00526358;
80% Identity
-