Basic Information

Gene Symbol
Kdm5
Assembly
GCA_035042425.1
Location
JAWNLL010000215.1:1427746-1434218[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-26 3.5e-23 81.8 0.1 2 89 235 318 234 318 0.95
2 2 8 1.8e+04 -4.1 0.1 56 69 1578 1591 1573 1599 0.69

Sequence Information

Coding Sequence
ATGTCCGCCAAAGCCGAGGCGGACTATCCAGCCGCCAGCGCCGGCGGCAATGCGGGAGGCGGCGGCCTCAATACCAACTCCAATGGGACCGGGACACCAGCGCGACGCCTGCGCACACGCAACTCAaccggcagcggcagcgagtcggccaaaaagcaaaccaacaacagcagccacaataacaacaataataacaatactagcaacaacaatagcgaaTCAGCAGCTTCGGGCAATGATGCaacaggaggaggagcagcaacaacaacgcctgTATcgggagcagcaggagcagcaccCAACTCAGTGGAGCGTCCGATGCCCAGTGTGCCGATGAAtcacgccagcagcagcgtatCGGCCAGCAAGAAGTATCACAACAGCTGTCCGCATCCGACGCCCACGGTGCACAAGAAACCGCTGCACACGAAgccgcacagcagcaacaaattcgATCAGGGCAAGAACGAGGAATTCCATTTTGATACGCCGCCCGAATGTCCGGTGTTTAGGCCCACTGCGGAGGAGTTTAAGAATCCGTTGGCCTACATCAGCAAGATACGCTCCATAGCGGAGAAGTGTGGTATTGCCAAGATATTGCCGCCGGATAAATGGTCGCCACCATTTGCCGTCGATGTGGACAAGTTGCGCTTTGTGCCGCGCGTGCAGCGCCTGAACGAACTGGAGGCGAAGACGCGCgtcaaattgaatttcttgGATCAGATTGCCAAGTTCTGGGAGCTGCAGGGCTCCTCACTCAAAATACCAATGGTGGAGCGTAAGGCTCTCGATCTTTATACGCTGCATCGCATCGTACAGGAGGAGGGCGGCATGGAGCAGACAACCAAGGAGCGCAAATGGGCCAAGGTCGCCAATCGCATGCAGTATCCATCCAGCAAGAGTGTGGGAGCCACCCTCAAGGCCCACTACGAGCGCATACTGCATCCCTTCGAGGTATACACCTCCGGCAAAGTGCTGGGACCGGGCGCTGCCGGTGCATCGGCGGGTGCCACGCCAGTCAAGTTCGAGGATGTGGGCACCGATTACAAGACCCACGAGATACCCACACGCCAGCAGATCGCGCCACCCAATGAAAACAATACGCGTCGCTCTAAGCGCTTCGGCAACTCTAATGTCGGATGCGGCTTAAATGTTGGAAAGCCGTGCTCAGCTTCGGCTGCCAGCATCAAAACCGAGACCAAGGAGGACTTTAAACGCGACCTTTTGAGTAGCTTCAATGCGGTCAATACCgcaggtggtggtggtggtggtgctgctggcggTCAATCAGCTGGCTGTGGTGGTGCTGCACCTGCACCCAATACACGCGCCACCCAGAAAAAGGCCTCAACTGAGCCACAGCAGCCACTCATCGATCCACTCATGAAGTACATCTGTCACATCTGCAATCGCGGCGATGTCGAGGAGTCCATGCTGCTGTGTGACGGCTGTGACGACAGCTATCACACCTTCTGTCTATTGCCACCATTGAGCAGCATACCCAAAGgAGAATGGCTTTGCCCACGTTGCGTTGTGGAGGAGGTGAGCAAGCCGCAGGAAGCTTTTGGCTTCGAGCAGGCCGAGCGAGAGTACACATTGCAGCAGTTCGGCCAGATGGCCGATCAGTTCAAGCAGGAATACTTCCGCAAACCGGTGCACTTGGTGCCCACGGAGATGGTAGAGCGCGAATTTTGGCGCATAGTTTCATCGATCGATGAAGATGTGACTGTAGAGTATGGCGCTGATTTGCATACAATGGATCACGGCTCCGGGTTTCCCACAAAGAGCTCGCACTACTTGCTGCCGGGCGATCAGGAGTATGCCGAATCTAGCTGGAATTTAAACAATCTGCCGCTGCTTGAGGATTCAATACTGGGTCACATAAATGCTGACATTAGTGGCATGAATGCGCCGTGGATGTATGTGGGCATGTGCTTCGCCGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCGATCAACTACTTGCATTGGGGTGAGCCAAAGACCTGGTACGGTGTGCCCGGCTCGCGTGCCGAGCAGTTCGAGCAGACAATGAAGCGTGCCGCACCAGAGCTCTTCTCCTCGCAGCCCGATCTTCTGCACCAGCTGGTCACCATTATGAATCCGAACATACTGATGAATAATGGGGTGCCCGTCTATCGCACCGATCAGCATGCCGGCGAGTTTGTCATCACATTTCCGCGCGCCTATCACGCCGGCTTCAATCAGGGCTACAATTTCGCCGAGGCCGTCAATTTTGCGCCAGCCGATTGGCTGAAAATGGGACGCGAATGCGTCAATCATTACTCGATGCTGCGCCGCTTCTGCGTGTTCTCACACGATGAGCTCGTCTGCAAGATGGCGCTGGAGCCGGCCAAGCTGACATTTGGCATTGCCACCGCTTGCTATATCGACATGGCCGAAATGGTCGATACGGAGAAGAAGCTGCGCAAATCGCTGCTCGAATGGGGCGTCACACGCGCCGAGCGTCGCGCCTTCGAGCTGGTCAACGATGACGAGCGCCATTGCCAGGAGTGCAACACCACATGCTTTCTGTCAGCCGTCGCCTGCGAATGCAACGACAAGCTGATTGTCTGCCTGCGCCACTACACCGTGCTCTGCGGCTGTGCACCGGAGAAGCACACGCTCATCTATCGCTATACGCTGGACGAGATGCCGCTGATGCTGCAGAAGCTGAAGGTCAAGGCGCACAGCTTTGAACGCTGGCTGTCTCGCTGTCGCGACATTGTCGATGCCCACACGCCCACATCGGTGACGCTCACCGAGCTGCAGGACCTGTGCAAGGAGGCCGAGACCAAAAAGTTTCCCTCGTCGTTGCTCATCGATCGACTAAATGCGGCGGCCATTGAGGCCGAGAAATGCGTCACTGTCATTCAACAGCTGGGCATCAATAAGgtACGCACCCGCTCCGATCACAATCAAGAGGCAGCACAGTACAAGCTGACCATGGAGGAGCTGGAGCTATTTGTGCAGGAAATCGACAACTTGTGCTGCATCATCGATGAGGGCGCCTCGGTGCGTGAGCTGCTCGTGTTGGGCAGACAGTTTGTGGAGCGGGCCGagtcgcagctgcagctatCGCTGGAGACGCTCGAGGAGAGCGACCTGGAGACGCTGATTAACGAGGGCAGTTCATTGCGCattgagctgcagcagctggatcAGCTGCAGAAGCGTCTCAAGCAATGCAAATGGTACAAACGCTCGCAGGGCTTGCGCGAGACGAGCTCCAAGCTGACCTACAAGGATGTAGAGACGCTGCTGCACACCGCGGCCGCCGATCTGGATCCCACCGATCCCTATGTGGATCGCGAGATGCGCAAGCTGCAGCAAATTGGCGCAGACATCGAGGCATGGGAATTACAGGCAGCCAAGTATTTCCGTCGACTCAATCAGCAGCATGAGTTGACCGAGATTGAGCAGTTTCTGAAGTCCGCCGGCGACATAAACGGTCAGGTGCCGTCGCACGGCATGCTTAAGGATGCACTGCGCAAGGCACGCGAATGGCTGCGCGCCGTAGACCAATTGCAGCAGAATAATCACGTCACCTACTGTCACACGCTGGAGGCGATGATTGAGCGGGGCCTGAGCATACCCATccagctggaggagctgggCCGCATGCAGGGACACCTGCAGAGTGCGCATCAGTGGAAGGAGAACACAGCGATGGCGTTCCTCAAAAAGGGCACATTCTACACGCTGCTGGAAGTGCTGATGCCGCGTGCAGATGCCATCAATATTGACTCGGATCTCAAGCCGCGTTTCCAAGATGATTTTCTCAAGGACAAGAATCCCGCCGAAATTGTGGCCAGCTTCAAGCAGGCCGAGGAGCACGAACTGCGCGATATGCGCGACCTCAGACGCCAGAATATGGCAAAGAATCCACTGCGTGACGTTTTCTGCCTGTGCAAATCTGAATTTCGTGCCCTGATGCACAATTGCCAGTTGTGCCGCGACTGGTTCCACGAGGATTGCGTGCCGCCGCCATCGCCGCGTGCGCAACCACAACAGAATGGTAATGCAGGTGCCATCAATGGAGGGGCGTCCATCTCAGCGTTAGCCAAGTGGCTATGTCCGAGCTGTGTGCGCTCGAAGCGGCCTCGCTTGGAGACGATTCTGCCGCTGCTCGTccagctgcaacagctgcccATCCGGCTGCCGGAGGACGAGGCGTTGCGCTGCTTGGCGGAGCGTGCCATGAACTGGCAGGATCGTGCTCGCAAAGCTCTCAGCAGTCCCGATGTCAGCGCCGCTGTGGAGGCCATCTTGACACAGCAACACAAGCGTCGCTCGGAGAGCGGCAGCTGCGCCGCCGTCCTCTTGGGCAACATCAACAGTCCCAGGAAGCCGCGACGCCTGCACAAGCAGGAGGCCAACAACACAGGCCGCTCCGAATCAGATGTCGAGGATGCAGATGATgtcgatgacgacgacgacgatgatgaatGCCGTCTGCGCATTGTCGAGGATGGCTACAGCAATGATGAGGACGAGCAGCTGCCGCGACTGACGTCCACGAATAATGCGcagaccagcagcagcagcactgatCTCCTGAAGCTGCTCTCCGACAGCGAAATCGAGAATCTGCTCGAGCTGATGATGGAGGGCGATTTGTTGGAGGTGTCGCTGGATGAGACGCACGAGCTGTGGCGTATCCTGGAAACAATGCCGCCCACAATGCTGCAGGCCGAGGCCAAGGCGCGTGTCGCTCAGcacatgcagctgcagcagaagcaacaacaatcgttGCCCAATGCGTCCGTGGTCGCCTCCTCGTCGAGCATACACAGCGGTGCCGAGGACTCCAACGATAGCCTGCTGGTCCAGAATAGTCCCAGTCCAGGCGCGCAGGCGGTGCGCAACAAGAAGCGCCGTTCCAAcgacgccagcagcgccaATGTGGCTGTGCCGCGCAAGAAGCAGAACACACCCAAGCAAACGCCTGGCAAGAAGCAGGCGGTGCGCAAGAGCGATAGCAAGGCGAGCAGCTCCCCCGGCGTTGATGCCGATGCGGAGAACAAGCAGGCGAATGGTggcaatacaacaacagcaacggcagcggcggcgacagctgcaacaaccacaacaacaccaacaacgcCGGGATCGGTGGCAGGTACAGCAACAGCCACTGGTGCAGCTTCGGgtgcagctgccacgcccacaccggGCTCCGCTGGGCAAAAGAAGCGCAAACGCACCACTACAactagcaacaataacaacaccaataacagcaacaacaacaatagcagtaacagcaacagtaacagcggcaacaacaacaacaacaacagcactgcTGGTGGCGGCACACCCACAGCGGGCGGCAACAATCCGCCAACAGGTGGCGTTGGCGGCGGGCAAAAGAAGCACGCGCAACGCACGCAGCAAACGGCGCAGGAGGATGATGAGGAGGAGTGCCGTGCAGAGAATTGCCATAAGCCAACGGGACGCGAGGTCGACTGGGTGCAGTGTGACGGTGGTTGCAACGAGTGGTTCCACATGTACTGTGTGGGCCTGAATCGCAGCCAGATCAAAGCCGACGACGATTACATATGCATACGCTGCTCCAAGACAGTCAGTGTGGGCGTcgctggcggcagcagcaccagcactcTAACGGTAACCACAACGACAACCAGCAGCCTGACACTTAGCACAGGGACGCCGGGCAAGCAGCGCGCAGCGCAATCGGCGCGATAG
Protein Sequence
MSAKAEADYPAASAGGNAGGGGLNTNSNGTGTPARRLRTRNSTGSGSESAKKQTNNSSHNNNNNNNTSNNNSESAASGNDATGGGAATTTPVSGAAGAAPNSVERPMPSVPMNHASSSVSASKKYHNSCPHPTPTVHKKPLHTKPHSSNKFDQGKNEEFHFDTPPECPVFRPTAEEFKNPLAYISKIRSIAEKCGIAKILPPDKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPGAAGASAGATPVKFEDVGTDYKTHEIPTRQQIAPPNENNTRRSKRFGNSNVGCGLNVGKPCSASAASIKTETKEDFKRDLLSSFNAVNTAGGGGGGAAGGQSAGCGGAAPAPNTRATQKKASTEPQQPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEQFEQTMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLTELQDLCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERAESQLQLSLETLEESDLETLINEGSSLRIELQQLDQLQKRLKQCKWYKRSQGLRETSSKLTYKDVETLLHTAAADLDPTDPYVDREMRKLQQIGADIEAWELQAAKYFRRLNQQHELTEIEQFLKSAGDINGQVPSHGMLKDALRKAREWLRAVDQLQQNNHVTYCHTLEAMIERGLSIPIQLEELGRMQGHLQSAHQWKENTAMAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKDKNPAEIVASFKQAEEHELRDMRDLRRQNMAKNPLRDVFCLCKSEFRALMHNCQLCRDWFHEDCVPPPSPRAQPQQNGNAGAINGGASISALAKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAAVEAILTQQHKRRSESGSCAAVLLGNINSPRKPRRLHKQEANNTGRSESDVEDADDVDDDDDDDECRLRIVEDGYSNDEDEQLPRLTSTNNAQTSSSSTDLLKLLSDSEIENLLELMMEGDLLEVSLDETHELWRILETMPPTMLQAEAKARVAQHMQLQQKQQQSLPNASVVASSSSIHSGAEDSNDSLLVQNSPSPGAQAVRNKKRRSNDASSANVAVPRKKQNTPKQTPGKKQAVRKSDSKASSSPGVDADAENKQANGGNTTTATAAAATAATTTTTPTTPGSVAGTATATGAASGAAATPTPGSAGQKKRKRTTTTSNNNNTNNSNNNNSSNSNSNSGNNNNNNSTAGGGTPTAGGNNPPTGGVGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVAGGSSTSTLTVTTTTTSSLTLSTGTPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530050;
90% Identity
iTF_00538014;
80% Identity
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