Basic Information

Gene Symbol
Kdm5
Assembly
GCA_003285905.2
Location
NW:1235409-1242833[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-26 6.6e-23 80.5 0.1 2 89 286 369 285 369 0.95

Sequence Information

Coding Sequence
ATGCCGTttactgtttttgtttacctGCCTGCTAGTCCGAGAGGGGTTGTGCGTGATTtggtgtatctAGCTGAACAAGGTCAGCAGCCGTTGCAGCAGTTCATTTCAAAATCTATAAAGCCCCACATGTCCGCCAAAGCCGAGGCGGACAATCTAGCCGCCAGCGGTGGCGGCACAGGAGGCGCCAATAGCAACTCCAATGGCACCGTAACACCAGCGCGACGCCTGCGCACCCGCAACTCAACCGGAAGTGGCAGCGAGTCGGCCAAAAAGAATacaaacagcagccacaataacaataataatattaataacaacaacagcaacaacaataacgaatCAGCTGCAACGGGAAATGATGGTTCGTCAGCGTCGACAGGAATATCGATGCCAACATCAGCTGGTGGTGGTAGCAGCGGTTCAGGTTCTGGCACTCCAATATCAGCGCCACCCAGCTCCGTAGAACGCCCCATGCCCAGCGTGCCGATGAATCATGCCAGTAGCAGCGTGTCGGCCAGTAAGAAATATCACAACAGCTGTCCGCATCCAACACCTACGGTGCACAAGAAATCGTTGCATACGAAGCCGCATAGCAGTAATAAATTCGATCAGGGCAAGAACGAGGAATTCCATTTTGATACACCGCCCGAGTGCCCAGTATTTCGACCGACAGCGGAAGAGTTTAAGAATCCATTGGCATACATTAGCAAGATTCGACCCATAGCGGAGAAATGTGGCATTGCCAAGATCTTACCGCCGGATAAATGGTCACCGCCATTTGCCGTCGATGTTGACAAGTTGCGTTTTGTGCCGCGCGTGCAGCGACTCAACGAACTGGAGGCAAAGACGCGcgtcaaattgaatttcttggATCACATCGCCAAGTTTTGGGAGCTGCAAGGCTCCTCTCTAAAAATCCCGATGGTAGAGCGTAAAGCCCTAGATCTATATACATTACATCGCATCGTACAGGAGGAGGGTGGCATGGAGCAGACCACCAAGGAGCGCAAATGGGCCAAGGTAGCCAATCGTATGCAGTATCCATCCAGCAAAAGTGTGGGCGCCACACTAAAAGCCCATTACGAACGTATTCTGCATCCGTTTGAGGTGTACACGTCTGGCAAAGTATTGGGACCTAATGCGGCAGCTTCTACAGTAAACGCAACGCCCGTCAAGCTCGAGGATGCCGGCACAGATTATAAGGCCCATGAGATACCCACACGTCAGCAAATCGCGCCGCCCAATGAGAACAATACGCGTCGCTCAAAGCGCTTTGGCAACTCGAACGCCAGTTGCGGCCTAAACACCAAGCCAGGTGCGGCTGCCATTACCATTAAAACTGAAACCAAGGAGGATTTCAAGCGCGACCTATTGAGCAGCTTTAATGCTGTCAATGCGGGTGCCGCTGCGGGTGCTGGCCAATCAGCTGGCTGCGGAGCTACACCGAATACACGCGCCACCCAAAAGAAAGCGACCACTGAGTTACAGCAGCCGCTTATCGATCCACTGATGAAGTACATCTGTCATATCTGCAATCGGGGCGATGTCGAAGAGTCAATGCTGCTCTGTGATGGCTGCGATGATAGCTATCATACCTTCTGCTTGCTGCCACCATTGAGCAGCATACCGAAAGGTGAATGGCTTTGCCCGCGTTGCGTTGTGGAGGAGGTGAGCAAGCCGCAGGAAGCTTTTGGTTTCGAACAGGCCGAGCGAGAGTACACCTTGCAGCAATTTGGCCAGATGGCCGATCAATTCAAGCAGGAATACTTTCGCAAACCGGTGCACTTGGTGCCCACGGAGCTGGTGGAGCGTGAATTTTGGCGCATTGTTTCGTCAATTGATGAGGATGTGACTGTGGAATATGGCGCAGATCTACATACAATGGATCACGGCTCCGGGTTTCCCACAAAGAGCTCACATTATTTGTTGCCCGGTGATCAGGAGTACGCCGAGTCCAGCTGGAATTTAAATAATCTTCCGTTGTTAGAGGATTCGATACTGGGACACATTAATGCTGATATTAGCGGCATGAATGCGCCGTGGATGTATGTGGGCATGTGCTTTGCTGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCGATTAACTATTTGCACTGGGGCGAGCCAAAGACCTGGTACGGTGTGCCCGGCTCCTGTGCCGAGCAGTTTGAAGAAACGATGAAGCGTGCCGCTCCTGAGCTCTTCTCCTCGCAGCCCGATCTACTGCATCAGCTGGTGACCATTATGAATCCCAACATATTAATGAACAATGGTGTGCCCGTCTTTCGCACCGATCAGCATGCTGGCGAATTTGTAATTACCTTTCCGCGCGCTTATCATGCTGGCTTCAATCAGGGCTACAATTTTGCCGAGGCCGTCAATTTTGCGCCCGCGGATTGGCTGAAAATGGGACGCGAATGCGTCAATCATTATTCAATGTTGCGTCGCTTCTGTGTCTTCTCGCACGACGAGCTCGTCTGCAAGATGGCTTTAGAGCCGGCCAAGTTGACGTTTGGCATCGCCACCGCCTGCTACATTGACATGGCCGAAATGGTTGACACCGAAAAGAAGCTGCGCAAGTCTCTGCTAGAGTGGGGCGTCACACGTGCCGAACGTCGCGCCTTCGAGCTGGTTAATGATGATGAGCGCCATTGCCAGGAGTGCAATACAACCTGCTTCCTATCGGCCGTTGCCTGCGAGTGCAACGACAAGCTGATTGTCTGCCTGCGCCACTATACTGTGCTCTGTGGCTGTGCGCCAGAGAAACATACGCTCATCTATCGCTATACGCTGGACGAGATGCCGTTGATGCTGCAAAAGTTGAAGGTTAAGGCGCACAGCTTTGAGCGCTGGCTGTCGCGTTGTCGCGACATTGTCGATGCCCACACTCCGACATCGGTGACCCTGTCCGAGCTGCAGGAGCTCTGTAAGGAAGCAGAGACCAAAAAGTTTCCTTCATCTCTGCTCATTGATCGACTCAATGCAGCGGCCATAGAGGCAGAGAAATGTGTTACAGTCATCCAACAACTGGGCATCAATAAGgtGCGCACCCGTTCCGATCACAATCAGGAGGCAGCACAATATAAACTGACCATggaggagctggagctgtTTGTACAGGAAATCGACAATCTGTGCTGCATTATCGATGAGGGTGCCTCGGTGCGTGAGCTTTTAGTGCTTGGTCGGCAGTTTGTGGAACGTGCCGATAACCAATTGCAGCAAACACTGGAGGCGCTGGAAGAGAATGAGCTGGAGACGCTCATCAATGAGGGCAGTTCGTTGCGCAttgagctgcagcagttggATCATCTGCAGAAGCGTCTCAAGCAATGCAAATGGTACAAACGCTCCCAAGGCTTGCGCGAGACCAGCTCCAAGCTGACCTATAATGATGTGAAGACTCTGCTGCATACGGCAGCCGCTGATCTGGATCCAACAGATCCTTATGTGGATCGTGAGATGCGCAAGTTGCAGCAAATTGGTGCTGCGATCGAGGCATGGGAATCACAGGCAGCTAAATATTTCCGACGACTCAATCAACAGCACGAGCTGGCCGAGATTGAGCAGTTTCTGAAGTCCGCCACTGACATCAATGGGCAGGTGCCGTCGCATGGTATATTGAAGGATGCGTTGCGCAAGGCTCGTGAATGGCTGCGCTctgtggagcagctgcagcaaaacaaTCATGTCACCTACTGTCATACGCTGGAGGCGATGATTGATCGCGGCCTCAGCATACCCATTCAGCTGGAGGAGCTCGGTCGCATGCAGGGCCATTTGAATAGTGCACATCAGTGGAAGGACAATACGGCACGTGCGTTCCTGAGGAAGGGCACATTCTATACGCTGCTGGAGGTGCTGATGCCGCGAGCAGATGCCATCAATATTGACTCGGATCTCAAGCCTCGTTTCCAAGATGATTTCCTCAAGGACAAGAACCCCGCCGAAATTGTGGCCAGCTTTAAGCATGCCGAGGAGCAAGAGTTGCGCGATATGCGCGACTTAAGGCGCCAGAATATGTCAAAGAATCCATTACGCGATGTCTTCTGTCTGTGCAAGTCGGAATTTCGTGGTCTGATGCACAATTGTCAGCTGTGCCGTGATTGGTTCCACGAGGATTGTGTGCCACCGCTGCCCCAGTCACTGATGGTGCAACAAAATGGCAACGGTGGCGGTGCAATCAATGGCGGAGCATCATCAATGCCAGCGCAACCCAAGTGGCTATGTCCGAGCTGTGTGCGCTCGAAGCGCCCACGCTTGGAGACAATTTTGCCGTtgcttgtgcagctgcagcagctgcccatTCGTCTACCTGAGGATGAGGCGTTGCGTTGCCTGGCGGAGCGGGCAATGAATTGGCAAGATCGTGCCCGAAAGGCGCTAAGCAGTCCCGATGTGAGCGCCGCCCTGGATGCGATTTTGGCTCAACAGCAGAAGCGACGCTCGGAGAGCAGCAATTGTGCCGCCGTGTTGGGCAATATAAGTAGTCCACGCAAGCCGAGACGTTCGCACAACCTGTCCAAGCAGGAAACCAATAACACGGGCCGCTCTGAGTCAGATAATGAGGATGGGGACGATGtggatgatgacgacgatgatgatgaatgCCGGCTACGCATTGTGGAGGACGGGTATAGCAATGATGAGGACGAACAGCTGCCGCGCTTGACTCAAAACAACGCgcaaaccagcagcagcagcagcagcactgatCTCTTGAAGCTGCTCTCCGACAGCGAAATTGAGAACCTACTCGAGCTTATGATGGAGGGCGATTTACTAGAGGTATCGCTAGATGAGACGCAAGAGCTGTGGCGCATACTGGAAACAATACCGCCTACACCGCTGCAGGCCGAGGCTAAAGCGCGAGTGGCTCAGCACTTGCAACAACATCGTCAGCAGCAAAGTCAGGGAGCAGCGACGACACTGACCACCTCATCCAGCATACACAGCGGCGCTGAGGATTCCAATGATAGCCTACTCGTGCAAAATAGTCCAAGTCCCGGCGCTGGCAGTGGCGCTCAAGCGGTGCGCAATAAGAAACGTCGCTCCAATGATGCGAACAGCGCAAATGTTGCTGTGCCGCGCAAGAAACAAAATACGCCCAAACAGACGCCAGGCAAGAAGACGCCAGCGGCGGTACGCAAGAGTGACAGCAAGGCGAGCAGTTCGCCCGGTGTGGATGCCGATGCGGAGAATAAACAGGCAAATGGTGGCAatacgacggcgacgacgccAACGACACCGGGCTcggcaacagctgttgcagcggcagcagcgacgcctATACCAGCGGCCGGGCACAAGAAACGCAAACgcaccacaaccacaacaaacaacaacaataacaataacaacaacagcagcagcaacaatagcaatgcAGGCGCCGGTGGTGGTGGCAGTGGCGGCGGCACACCTacagctggcagcaacaacaatccaGCAACAGGTGGCGGTCAAAAGAAGCATGCGCAACGCACACAGCAAACGGCACAGGAGGACGACGAAGAGGAATGCCGCGCCGAGAATTGCCATAAGCCCACAGGCCGCGAAGTGGATTGGGTGCAGTGCGACGGCGGCTGCAACGAATGGTTTCACATGTACTGTGTGGGCCTGAATCGCAGCCAGATAAAGGCTGATgatgattatatatgtatacgctGCTCCAAGACGGTCAGCGTGGGCGTTgccggtggcagcagcagtttaACGGTGACCACAACGACGACCAGCAGCCTAACGCTGAGCACAGGGACGCCGGGGaagcagcgagcagcgcaaTCGGCGCGGTAG
Protein Sequence
MPFTVFVYLPASPRGVVRDLVYLAEQGQQPLQQFISKSIKPHMSAKAEADNLAASGGGTGGANSNSNGTVTPARRLRTRNSTGSGSESAKKNTNSSHNNNNNINNNNSNNNNESAATGNDGSSASTGISMPTSAGGGSSGSGSGTPISAPPSSVERPMPSVPMNHASSSVSASKKYHNSCPHPTPTVHKKSLHTKPHSSNKFDQGKNEEFHFDTPPECPVFRPTAEEFKNPLAYISKIRPIAEKCGIAKILPPDKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDHIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPNAAASTVNATPVKLEDAGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNASCGLNTKPGAAAITIKTETKEDFKRDLLSSFNAVNAGAAAGAGQSAGCGATPNTRATQKKATTELQQPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERADNQLQQTLEALEENELETLINEGSSLRIELQQLDHLQKRLKQCKWYKRSQGLRETSSKLTYNDVKTLLHTAAADLDPTDPYVDREMRKLQQIGAAIEAWESQAAKYFRRLNQQHELAEIEQFLKSATDINGQVPSHGILKDALRKAREWLRSVEQLQQNNHVTYCHTLEAMIDRGLSIPIQLEELGRMQGHLNSAHQWKDNTARAFLRKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKDKNPAEIVASFKHAEEQELRDMRDLRRQNMSKNPLRDVFCLCKSEFRGLMHNCQLCRDWFHEDCVPPLPQSLMVQQNGNGGGAINGGASSMPAQPKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILAQQQKRRSESSNCAAVLGNISSPRKPRRSHNLSKQETNNTGRSESDNEDGDDVDDDDDDDECRLRIVEDGYSNDEDEQLPRLTQNNAQTSSSSSSTDLLKLLSDSEIENLLELMMEGDLLEVSLDETQELWRILETIPPTPLQAEAKARVAQHLQQHRQQQSQGAATTLTTSSSIHSGAEDSNDSLLVQNSPSPGAGSGAQAVRNKKRRSNDANSANVAVPRKKQNTPKQTPGKKTPAAVRKSDSKASSSPGVDADAENKQANGGNTTATTPTTPGSATAVAAAAATPIPAAGHKKRKRTTTTTNNNNNNNNNSSSNNSNAGAGGGGSGGGTPTAGSNNNPATGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVAGGSSSLTVTTTTTSSLTLSTGTPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530050;
90% Identity
iTF_00526358;
80% Identity
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