Basic Information

Gene Symbol
Kdm5
Assembly
GCA_035045365.1
Location
JAWNPC010000948.1:1163468-1170981[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-26 1e-22 80.5 0.1 2 89 250 333 249 333 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAAGCGGAGGCGGACAATCTAGCCGCCAGCATTGGCGGCGGCCCAGGAGGCGCCAATAGCAACTCCAATGGCACCGTAACACCAGCGCGACGCCTGCGCACCCGCAACTCAACCGGCAGTGGCAGCGAGTCGGCCAAAAAGaatacaaacaacagcagccacaataataataacaatattaatagcaacaacaacaacaacagcagcaacagcaacaacaacattaacgaATCAGCTGCAACGGGAAATGATGGCACATCAGCGGCAACAGGAGGACTATCGATGCCAACATCAGCCGGTGGTGCTGGCTCTGGCACTCCAATATCAGCACCACCCAGCTCCGTGGAACGTCCCATGCCCAGCGTGCCAATGAAtcatgccagcagcagcgtctcGGCCAGCAAGAAATATCACAACAGCTGTCCGCATCCAACGCCCACGGTGCACAAGAAAACGTTGCATACGAAgccgcacagcagcaacaaatttgatcaGGGCAAGAATGAGGAATTCAATTTTGATACACCGCCCGAGTGTCCAGTATTTCGGCCGACAGCGGAGGAGTTTAAGAATCCATTGGCATACATTAGTAAGATTCGGTCCATAGCGGAGAAATGTGGCATTGCCAAGATCTTGCCGCCGGACAAATGGTCGCCGCCATTTGCCGTCGATGTGGACAAGTTGCGTTTTGTGCCGCGCGTCCAGCGTCTGAACGAGCTGGAGGCGAAGACGCgcgtcaaattgaatttcttggATCACATTGCCAAGTTCTGGGAGCTGCAAGGCTCCTCACTGAAAATCCCGATGGTCGAGCGTAAGGCTCTCGATCTATACACATTGCATCGCATCGTACAGGAGGAGGGTGGAATGGAGCAGACCACCAAGGAGCGCAAATGGGCCAAGGTGGCCAATCGTATGCAGTATCCATCCAGCAAAAGTGTGGGCGCCACACTCAAAGCCCATTACGAGCGCATACTGCATCCCTTTGAGGTGTATACGTCGGGCAAAGTATTGGGACCGAATGCGGCGGCAGCTACTGCCGTTGGCGCTACGCCCGTCAAGCTCGAGGATGCCGGCACCGATTACAAGGCCCACGAGATACCCACACGTCAGCAAATCGCACCGCCCAATGAGAACAATACGCGTCGCTCCAAGCGCTTTGGCAACTCGAATGCCAGCTGCGGCCTAAACACTAAGCCAGGCGCCGCTGCCATTACCATTAAGACGGAAACCAAGGAGGACTTCAAACGCGATCTATTGAGCAGCTTCAATGCGGTCAATGCGGGTGCCGCTGCCGGCGCCGCTCAATCAGCTGGCTGTGGTGCAACACCGAATACACGCGCCACCCAAAAGAAGGCCACCACTGAGCTACAGCAACCGATGATCGATCCACTGATGAAGTACATCTGTCACATCTGCAATCGCGGCGATGTCGAAGAGTCAATGCTGCTATGTGACGGCTGCGATGATAGCTATCATACCTTCTGCCTGCTACCACCATTGAGCAGCATACCAAAAGGTGAATGGCTTTGCCCGCGTTGCGTTGTCGAGGAGGTGAGCAAGCCGCAGGAAGCATTTGGTTTCGAGCAGGCGGAGCGAGAGTATACCTTGCAGCAATTTGGCCAGATGGCGGATCAATTCAAGCAGGAATACTTTCGCAAGCCGGTGCATTTGGTACCCACGGAGATGGTGGAGCGCGAATTTTGGCGCATTGTTTCGTCAATTGATGAGGATGTGACTGTGGAATATGGCGCAGATCTGCATACCATGGATCATGGCTCTGGTTTTCCCACTAAGAGCTCACACTATTTGTTGCCCGGCGATCAGGAGTATGCCGAGTCTAGCTGGAATTTAAATAATCTTCCGCTGCTGGAGGATTCGATATTGGGACACATTAATGCTGATATTAGCGGCATGAATGCGCCGTGGATGTATGTGGGCATGTGCTTTGCTGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCGATCAACTATTTGCATTGGGGCGAGCCAAAGACCTGGTACGGTGTGCCCGGCTCCTGTGCCGAACAGTTCGAGGAGACAATGAAGCGTGCCGCACCCGAGCTATTCTCCTCACAGCCCGATCTACTGCATCAGCTGGTGACCATTATGAATCCGAACATATTGATGAACAATGGTGTGCCCGTCTTTCGCACCGATCAGCATGCCGGCGAATTTGTAATTACCTTTCCGCGCGCCTATCATGCCGGCTTCAATCAGGGCTACAACTTTGCCGAGGCTGTCAATTTTGCGCCCGCGGATTGGCTGAAAATGGGACGCGAATGCGTCAATCATTATTCAATGTTGCGTCGCTTCTGTGTTTTCTCGCACGACGAGCTCGTCTGCAAGATGGCCCTGGAGCCGGCCAAGCTGACATTTGGCATTGCCACCGCCTGCTACATTGACATGGCCGAAATGGTGGACACCGAAAAGAAACTGCGCAAATCTCTGCTCGAATGGGGTGTCACGCGCGCCGAGCGGCGCGCCTTCGAGCTGGTCAACGATGATGAGCGCCATTGCCAGGAGTGCAATACGACCTGCTTCCTGTCGGCCGTTGCCTGCGAGTGCAACGACAAGCTGATTGTCTGCCTGCGCCACTATACCGTACTCTGTGGCTGTGCACCCGAGAAGCATACGCTCATCTATCGCTATACGCTGGACGAGATGCCGCTGATGCTGCAAAAGTTAAAGGTGAAGGCGCACAGCTTCGAGCGTTGGCTGTCGCGTTGTCGTGACATTGTCGATGCCCATACGCCGACCTCGGTCACCCTGTCCGAGCTGCAGGAACTCTGCAAGGAAGCGGAGACCAAAAAGTTTCCATCATCTCTGCTCATTGATCGACTCAATGCAGCTGCCATAGAGGCAGAGAAATGTGTGACAGTCATTCAACAGCTGGGCATTAATAAGGTGCGCACCCGTTCCGATCACAATCAGGAGGCAGCCCAATATAAGCTGACCATggaggagctggagctgtTTGTCCAGGAAATCGACAATCTGTGCTGCATTATCGACGAGGGCGCCTCGGTGCGTGAGCTGTTAGTGCTTGGCCGTCAGTTTGTGGAGCGCGCCGATACCCAGTTGCAGCACACACTGGAGGCGCTGGAGGAGAATGAGCTGGAGACGCTGATCAATGAGGGCAGCTCGTTGCGCAttgagctgcagcagttggATCATCTGCAGAAGCGTCTCAAGCAATGCAAGTGGTACAAACGCTCGCAGGGATTGCGCGAGACCAGCTCGAAGCTGACCTACAACGATGTGAAGACCCTGCTGCATACGGCAGCCGCTGATCTGGATCCAACAGATCCCTATGTGGATCGTGAGATGCGCAAATTGCAGCAAATTGGTGCGGCCATCGAGGCATGGGAATCACAGGCAGCCAAATATTTCCGACGACTCAATCAACAGCATGAGCTGGTCGAGATCGAGCAGTTTCTGAAGTCCGCCACCGACATCAATGGGCAGGTGCCGTCTCATGGCATTTTGAAGGATGCGTTGCGCAAGGCACGCGAATGGCTGCGCTCcgtggagcagctgcagcagaacAATCACGTCACCTACTGTCATACGCTGGAGGCGATGATTGATCGGGGCCTCAGCATACCCATCCAGCTGGAGGAGCTCGGACGCATGCAGGGGCACCTGAATAGTGCACATCAGTGGAAGGATAATACGGCGCGTGCGTTCCTCAAGAAGGGCACATTCTATACGCTGCTGGAGGTGCTGATGCCGCGCGCAGATGCCATCAACATTGACTCGGATCTCAAGCCGCGTTTCCAAGATGATTTCCTCAAGGACAAGAATCCCGCCGAAATTGTGGCCAGCTTCAAGCATGCCGAGGAGCAGGAGTTGCGCGACATGCGCGACCTACGGCGCCAGAATATGTCCAAGAATCCATTGCGCGATGTCTTCTGTCTGTGCAAGTCCGAGTTTCGTGGCCTGATGCACAATTGCCAGCTGTGCCGCGACTGGTTTCACGAGGACTGTGTGCCCCCAGTGCCCCACGCAATGATGATGGTGCAACAAAATGGTAATGGCGGCGGTGCACTGAATGGCGGTGGTGCATCCACAATGCCAGCGCAACCCAAGTGGCTATGTCCGAGCTGTGTGCGCTCGAAGCGTCCACGTTTGGAGACCATTTTGCCGTTGctggtgcagctgcagcagctgcccatTCGTCTGCCCGAGGATGAGGCGTTGCGTTGCCTGGCCGAGCGTGCCATGAATTGGCAGGATCGTGCGCGCAAAGCGCTCAGCAGTCCCGATGTGAGCGCCGCTCTGGATGCCATCTTGGCCCAACAGCAGAAGCGACGCTCCGAGAGCAGCAATTGTGCCGCCGTCCTGGGCAATATAAGTAGTCCACGCAAGCCTAGACGTTCGCACAATCTGTCGTCCAAGCAAGACAACCATAATGCAGGCCGCTCCGACTCCGACAACAATGAGGATGGCGACGATGtggatgatgacgatgatgatgatgaatgcCGGCTGCGCATTGTGGAGGATGGGTATAGCAATGATGAGGACGAACAGCTGCCGCGCTTGGGTCAAAGCAATGCGCAAAACaacacgagcagcagcagcagcactgaTCTCTTGAAGCTGCTCTCCGACAGCGAAATCGAGAATCTGCTCGAGCTGATGATGGAGGGTGACTTGCTGGAGGTGTCGCTGGACGAGACGCAGGAGCTGTGGCGCATACTGGAAACAATACCGCCCACAGCGCTGCAGGCGGAGGCTAAGGCGCGCGTGGCCCAGCACTTGCAGCAACATCGTCAGGTGACAGCGACGACACTgaacaccagcaccaccaactCATCCAGCATACACAGCGGCGCTGAGGACTCCAATGATAGCCTGCTCGTGCAAAATAGTCCAAGTCCCAATGCTGGCAGCGGCGCCCAAACGGTGCGCAATAAGAAGCGTCGCTCCAATGATGCCAGCAGCGCCAATGTGGCTGTGCCGCGCAAGAAACAGAATACGCCCAAACAGACGCCGGGCAAGAAGACGCCGGCGGCGGTGCGCAAAAGCGACAGCAAGGCGAGCAGCTCGCCCGGCGTGGATGCCGATGCGGAAAACAAGCAGGCGAATGGTGGCaatacgacgacgacggcaacggcgacgccAACGACGCCGGGCGCAgcaacggcggcagcggcagcgacaacGCCTGTGCCAGCGGCTGGGCACAAGAAACGCAAACGcaccacaacaaccacaaacaacaacaataacaacaacaacaatagcaacagcaacagcaacaatagtaATGCTGGGGGCGGCGGCACGCCCACAGCTGGCGGCAACCACAATCCGGCAACAACAGGTGGCGGCCAGAAGAAGCATGCGCAGCGCACACAGCAAACAGCCCAGGAGGACGATgaggaggagtgccgcgccgAGAATTGCCATAAGCCCACCGGGCGCGAGGTGGATTGGGTGCAGTGCGACGGCGGCTGCAACGAGTGGTTCCACATGTACTGTGTGGGCCTGAATCGCAGCCAGATCAAGGCCGACGATGATTACATATGCATACGCTGCTCCAAGACGGTcagcgtgggcgtgggcgtggccggcggcagcagcagcagcagcttaacGGTGACCACAACGACGACCAGCAGCCTGACGCTGAGCACAGGGACGCCGGgcaagcagcgagcagcgcAGTCGGCGCGGTAG
Protein Sequence
MSAKAEADNLAASIGGGPGGANSNSNGTVTPARRLRTRNSTGSGSESAKKNTNNSSHNNNNNINSNNNNNSSNSNNNINESAATGNDGTSAATGGLSMPTSAGGAGSGTPISAPPSSVERPMPSVPMNHASSSVSASKKYHNSCPHPTPTVHKKTLHTKPHSSNKFDQGKNEEFNFDTPPECPVFRPTAEEFKNPLAYISKIRSIAEKCGIAKILPPDKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDHIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPNAAAATAVGATPVKLEDAGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNASCGLNTKPGAAAITIKTETKEDFKRDLLSSFNAVNAGAAAGAAQSAGCGATPNTRATQKKATTELQQPMIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERADTQLQHTLEALEENELETLINEGSSLRIELQQLDHLQKRLKQCKWYKRSQGLRETSSKLTYNDVKTLLHTAAADLDPTDPYVDREMRKLQQIGAAIEAWESQAAKYFRRLNQQHELVEIEQFLKSATDINGQVPSHGILKDALRKAREWLRSVEQLQQNNHVTYCHTLEAMIDRGLSIPIQLEELGRMQGHLNSAHQWKDNTARAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKDKNPAEIVASFKHAEEQELRDMRDLRRQNMSKNPLRDVFCLCKSEFRGLMHNCQLCRDWFHEDCVPPVPHAMMMVQQNGNGGGALNGGGASTMPAQPKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILAQQQKRRSESSNCAAVLGNISSPRKPRRSHNLSSKQDNHNAGRSDSDNNEDGDDVDDDDDDDECRLRIVEDGYSNDEDEQLPRLGQSNAQNNTSSSSSTDLLKLLSDSEIENLLELMMEGDLLEVSLDETQELWRILETIPPTALQAEAKARVAQHLQQHRQVTATTLNTSTTNSSSIHSGAEDSNDSLLVQNSPSPNAGSGAQTVRNKKRRSNDASSANVAVPRKKQNTPKQTPGKKTPAAVRKSDSKASSSPGVDADAENKQANGGNTTTTATATPTTPGAATAAAAATTPVPAAGHKKRKRTTTTTNNNNNNNNNSNSNSNNSNAGGGGTPTAGGNHNPATTGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVGVAGGSSSSSLTVTTTTTSSLTLSTGTPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530050;
90% Identity
iTF_00526358;
80% Identity
-