Basic Information

Gene Symbol
Kdm5
Assembly
GCA_018903485.1
Location
JAEIGF010000059.1:6874745-6881275[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-26 3.1e-23 81.8 0.1 2 89 250 333 249 333 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAAGCCGAGGCGGACAATCTAGCCGCCAGCGCCACTGGCGGCGGCCCAGGAGGCGGTAATAGCAACTCCAATGGCACCGTAACACCAGCGCGACGCCTGCGCACACGCAACTCAACCGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGTGGCGGCGGCGGTGCAGCTACCGGTGGTGGTGCTGCTGCTGCAACTGGCGCGACTCCCAGCTCCGTGGAACGCCCCATGCCCAGCGTGCCGATGAATCATGCCAGCAGCAGTGTTTCGGCCAGCAAGAAATATCACAATAGCTGTCCGCATCCGACGCCCACAGTGCACAAGAAGACGCTGCACACGAAGCCGCATAGCAGCAATAAATTTGATCAGGGCAAGAACGAGGAATTCCATTTCGATACGCCGCCCGAGTGTCCAGTGTTCCGGCCGACAGCGGAGGAGTTTAAGAATCCATTGGCATACATTAGCAAAATACGCTCCATAGCTGAGAAATGTGGCATTGCCAAGATATTACCGCCGGAGAAATGGTCACCGCCATTTGCTGTCGATGTGGATAAGTTACGTTTTGTACCACGCGTCCAGCGTCTCAATGAGTTGGAGGCCAAGACGCGTGTCAAATTGAATTTTTTGGATCAAATCGCCAAATTCTGGGAGCTGCAAGGCTCTTCCCTGAAAATCCCCATGGTGGAGCGCAAAGCTCTAGATCTATATACTCTGCATCGCATTGTGCAGGAGGAGGGCGGCATGGAGCAGACCACCAAGGAGCGCAAATGGGCCAAAGTGGCCAATCGCATGCAGTATCCATCCAGCAAAAGTGTTGGTGCCACACTCAAAGCCCACTACGAGCGAATACTTCATCCCTTTGAGGTCTACACCTCTGGCAAGGTATTGGGACCTGGCGCGGCACCTGCTGCCGTTAATGCAACGCCCGTCAAGCTCGAGGATGTTGGCACCGATTACAAGGCCCATGAAATACCCACACGTCAGCAAATCGCGCCGCCAAATGAAAATAATACGCGTCGCTCCAAGCGCTTTGGCAATTCAAATGCCAGCTGCGGCCTAACCACGGTCAAGCCAGGCGCTGCTGCAGTCACCATCAAAACAGAAACCAAGGAAGATTTTAAACGCGATCTTTTGAGCAGCTTCAATGCAGTCAACACTGGTGGTGGTGGTGGTGGTGCCGCTGGCGTTGGCCAGTCTGCCGGCTGTGGGGCAACAACACTTGCACCCAACACACGTGCCACCCAAAAGAAAGCCAGCACAGAGCCACAGCAGCCGCTTATCGATCCGCTCATGAAGTACATCTGTCACATTTGCAATCGCGGCGATGTCGAGGAGTGCATGCTGCTCTGTGACGGTTGCGACGATAGCTATCATACCTTCTGCTTGTTGCCACCATTGAGCAGCATACCGAAAGGTGAATGGCTGTGCCCACGTTGCGTTGTGGAGGAGGTGAGCAAGCCGCAGGAAGCTTTTGGCTTCGAGCAGGCCGAGCGTGAGTACACATTGCAGCAGTTTGGCCAGATGGCCGATCAGTTCAAGCAGGAATATTTTCGCAAACCGGTGCACTTGGTGCCCACGGAGATGGTGGAGCGTGAATTCTGGCGCATTGTCTCCTCGATTGATGAGGATGTGACTGTGGAATATGGCGCCGATTTGCATACAATGGATCACGGCTCTGGTTTTCCCACAAAGAGCTCGCATTATTTGCTGCCCGGCGATCAGGAGTATGCCGAATCCAGCTGGAATTTAAATAATCTACCGCTGCTGGAGGACTCAATACTGGGACATATTAATGCTGATATTAGCGGCATGAATGCGCCTTGGATGTATGTGGGCATGTGCTTTGCTGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCGATTAACTATTTGCATTGGGGCGAGCCAAAGACTTGGTACGGTGTGCCCGGCTCCTGTGCCGAACAGTTCGAGGAGACCATGAAACGCGCCGCGCCCGAGCTGTTCTCCTCGCAGCCCGATTTGCTGCATCAACTGGTCACGATTATGAATCCCAATATATTGATGAACAATGGTGTACCCGTCTATCGTACCGATCAGCATGCCGGCGAATTTGTCATTACCTTTCCGCGCGCCTATCATGCCGGCTTTAATCAGGGCTACAATTTCGCCGAGGCCGTCAACTTTGCGCCCGCAGATTGGCTTAAAATGGGACGCGAATGCGTCAATCATTATTCAATGCTGCGTCGCTTCTGTGTGTTCTCGCACGATGAGCTAGTCTGCAAGATGGCCTTGGAGCCGGCCAAGCTGACTTTTGGCATTGCCACCGCTTGCTATATAGACATGGCCGAGATGGTCGACACGGAGAAGAAACTGCGCAAATCTCTGCTGGAATGGGGCGTCACTCGCGCCGAACGTCGCGCCTTCGAACTGGTCAACGATGATGAGCGCCATTGCCAGGAGTGCAACACCACCTGCTTTCTATCGGCCGTTGCCTGCGAGTGCAACGATAAGCTGATTGTCTGCCTGCGCCACTACACCGTACTCTGCGGCTGTGCGCCAGAGAAGCATACGCTCATCTATCGCTATACGCTGGACGAGATGCCGCTGATGCTGCAAAAGTTAAAGGTTAAGGCGCACAGCTTTGAGCGTTGGCTATCCCGCTGTCGCGACATTGTCGATGCACATACGCCCACATCGGTGACGCTGTCCGAGCTGCAGGAGCTCTGCAAGGAGGCCGAGACCAAAAAGTTTCCCTCATCCCTGCTCATCGATCGGCTCAATGCAGCGGCCATTGAGGCCGAGAAATGTGTCACGGTTATACAACAGCTGGGCATTAATAAGGTGCGCACCCGTTCCGATCACAATCAGGAAGCAGCACAATATAAGCTGACCATGGAGGAGCTGGAGCTGTTTGTACAGGAAATCGATAATCTGTGCTGCATCATCGATGAGGGAGCCTCGGTGCGTGAGCTGCTTGTGCTGGGACGACAGTTTGTGGAACGGGCCGATTCGCAGCTGCAGCTATCGCTGGAGGCGCTCGAGGAGAACGATTTGGAGACGCTTATCAATGAGGGCAGCTCGTTGCGCATTGAGCTCCAGCAGCTGGATCAGTTGCAGAAGCGTCTCAAACAATGCAAATGGTACAAACGCTCCCAGGGCTTGCGCGAGACCAGCTCGAAGCTGACCTACAAAGATGTCAAGAACCTGCTGCATACGGCAGCCGCTGATCTGGATCCGACCGATCCGTATGTGGATCGTGAAATGCGTAAACTGCAGCAAATTGGCGCCGCAATCGAGGCATGGGAGTCACAGGCAGCTAAATATTTTCGACGACTCAATCAGCAGCATGAGCTGGCCGAGATTGAGCAGTTTCTCAAGTCCGCCAGCGAGATCAATGGGCAGGTGCCGTCGCATGGCGTCTTAAAGGATGCACTGCGCAAGGCACGGGAATGGCTGCGTGCCGTGGAACAATTGCAGCAGAATAATCACGTCACCTACTGTCACACGCTGGAGGCGATGATCGATCGTGGCCTCAATATACCCATCCAGCTGGAGGAGCTCGGTCGCATGCAGGGCCATTTGAGTAGTGCACATCAGTGGAAGGAGAATACGGCGCGGGCGTTCTTGAAGAAGGGCACATTCTACACGCTGCTGGAGGTGTTGATGCCGCGTGCAGATGCCATCAATATTGATTCGGATCTCAAGCCGCGTTTCCAAGATGATTTCCTAAAGGACAAGAATCCCGCCGAAATTGTGGCCAGCTTCAAGCATGCCGAGGAGCAGGAATTGCGCGATATGCGCGATCTAAGGCGCCAGAATATGACCAAGAATCCGTTGCGCGACGTCTTCTGTCTATGCAAGTCCGAATTTCGTGGCCTCATGCATAATTGCCAGCTGTGCCGCGATTGGTTTCACGAAGATTGCGTGCCGCCGGTGCCGGAAGCCCAGCCACTGATGGCCCAACAAAATGGCAACGGTAATGGAGGTGCAATTAATGGTGGAGGTGCATCAATGCCGGCGCAAGAAAAGTGGCTGTGTCCGAGCTGTGTGCGCTCGAAGCGTCCACGTTTGGAGACCATTCTGCCGCTGCTCGTGCAGCTGCAACAGCTGCCCATACGTCTACCTGAGGATGAGGCGTTGCGCTGTTTGGCGGAACGTGCCATGAACTGGCAGGATCGTGCACGCAAAGCGCTCAGCAGTCCCGACGTCAGCGCGGCTCTAGATGCAATTTTGGCTCAACATCAGAAGCGTCGCACGGAGAGCACCAGCTGCGGCGCCGTGTTGGGCAACATAAGCAGTCCGAGGAAGCCGCGACGTACGCACAATCTGTCCAAGCAGGAAGCCAACAATGCGGGGCGTTCCGAGTCAGATAATGAAGATAATGGGGATGATGTGGATGACGATGACGACGATGATGAATGCCGGCTTCGCATTGTGGAGGACGGGTATAGCAATGATGAGGACGAGCAGCTGCCGCGACTGGCGACTAACAATTTGCAAATCACCAGCAACAACAACAGCAGCAGCAATAGCACTGATCTCTTAAAACTGCTCTCCGAAAGCGAAATTGAGAATCTACTGGAGCTAATGATGGAGGGCGATTTGTTAGAGGTATCACTGGATGAGACGCAAGAGCTGTGGCGCATACTGGAAACGATGCCGCCGACAACGCTGCAAGCCGAGGCAAAATCACGTGTCGCTCAGCATTTGCAACAGCACCGTCAGCAGCAGCAGCAAATCCAGGCGACAACAGGCACACTGGCAACAACCGCATCCAGCATACACAGCGGTGCTGAGGATTCCAATGATAGCCTGCTAGTGCAAAATAGTCCGAGTCCCGGCGCTGGCAACGGCGCGGCGCAGGCGGCGGTGCGCAATAAAAAACGTCGCTCCAATGATGCCAGCAGCGCCAATGTGGCTGTGCCGCGCAAGAAACAGAATACGCCCAAACAGACGCCGGGCAAAAAGTCGCAAGCGGTGCGCAAAAGCGACAGCAAGGCGAGCAGCTCGCCCGGCGTCGATGCGGATGCGGAGAACAAGCAGGCAAACGGTGGCAATACAACGGCAACAACACCAACGACACCGGGCGCAGCGACACCAGCAGCTGGCGCCACGCCCATACCGGCATCCGGCCACAAGAAGCGCAAACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGGCGCTGGTGGCGGCGGCGGCCAGAAAAAGCATGCGCAACGCACACAGCAAACGGCACAGGAGGACGACGAAGAGGAATGCCGGGCCGAGAATTGCCATAAGCCAACCGGACGTGAGGTGGACTGGGTGCAGTGCGATGGCGGCTGCAACGAATGGTTTCACATGTACTGTGTGGGCCTGAATCGTAGTCAAATTAAGGCCGACGATGATTACATTTGTATTCGCTGCTCGAAAACGGTCAGCGTCGGCGTCGCCGCCGGCAGCAGCAGTCTAACGGTGACCACAACGACAACCAGCAGCCTGACGCTGAGCACAGGAACGCCAGGGAAGCAGCGAGCAGCGCAGTCGGCGCGGTAG
Protein Sequence
MSAKAEADNLAASATGGGPGGGNSNSNGTVTPARRLRTRNSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGGAATGGGAAAATGATPSSVERPMPSVPMNHASSSVSASKKYHNSCPHPTPTVHKKTLHTKPHSSNKFDQGKNEEFHFDTPPECPVFRPTAEEFKNPLAYISKIRSIAEKCGIAKILPPEKWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPGAAPAAVNATPVKLEDVGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNASCGLTTVKPGAAAVTIKTETKEDFKRDLLSSFNAVNTGGGGGGAAGVGQSAGCGATTLAPNTRATQKKASTEPQQPLIDPLMKYICHICNRGDVEECMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERADSQLQLSLEALEENDLETLINEGSSLRIELQQLDQLQKRLKQCKWYKRSQGLRETSSKLTYKDVKNLLHTAAADLDPTDPYVDREMRKLQQIGAAIEAWESQAAKYFRRLNQQHELAEIEQFLKSASEINGQVPSHGVLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIDRGLNIPIQLEELGRMQGHLSSAHQWKENTARAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKDKNPAEIVASFKHAEEQELRDMRDLRRQNMTKNPLRDVFCLCKSEFRGLMHNCQLCRDWFHEDCVPPVPEAQPLMAQQNGNGNGGAINGGGASMPAQEKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILAQHQKRRTESTSCGAVLGNISSPRKPRRTHNLSKQEANNAGRSESDNEDNGDDVDDDDDDDECRLRIVEDGYSNDEDEQLPRLATNNLQITSNNNSSSNSTDLLKLLSESEIENLLELMMEGDLLEVSLDETQELWRILETMPPTTLQAEAKSRVAQHLQQHRQQQQQIQATTGTLATTASSIHSGAEDSNDSLLVQNSPSPGAGNGAAQAAVRNKKRRSNDASSANVAVPRKKQNTPKQTPGKKSQAVRKSDSKASSSPGVDADAENKQANGGNTTATTPTTPGAATPAAGATPIPASGHKKRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGGGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVAAGSSSLTVTTTTTSSLTLSTGTPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530050;
90% Identity
iTF_00526358;
80% Identity
-