Basic Information

Gene Symbol
Kdm5
Assembly
GCA_037044455.1
Location
JBAMBS010000826.1:156379-162202[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-26 6.2e-23 81.3 0.1 2 89 215 298 214 298 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAAGCAGAGGCGGACAACCCAGCCGCCAGTCTTGGTGGAGGCAACAGTAATTCCAATGGCACTGTTACACCAGCGCGACGCTTGCGCACGCGCAACTCAACCGGCGGTAGTGGCAGCGAATCAGCTAAAAAAAGCAGCAgtcataataacaataataatgaggCTGTGAATGAagtatcaacaacagcaacaggaggaacaccagcaacagctgctataACGGTTACGACCAGTTCCGTGGAACGCCCCATGCCCAGCGTACCGATGAATCATGCTAGCAGCAGTGTTTCGGCCAGCAGAAAATATCACAATAGCTGTCCGCATCCGACTCCAAGCGTGCACAAGAAGCCACTGCACACGAAGCCTCACAGTaccaataaatttgatcaggGAAAGAACGAGGAATTCCATTTTGATACCCCACCGGAGTGTCCGGTATTTCGGCCTACTGCGGAAGAGTTTAAGAATCCTTTAGCCTATATTAGTAAGATACGATCTATAGCGGAGAAATGTGGTATTGCAAAGATATTACCACCGGAGAAGTGGTCTCCGCCATTTGCTGTCGATGTTGACAAGTTAAGTTTTATACCGCGCGTCCAGCGCTTAAATGAACTGGAGGCTAAAACACGagttaaactaaattttttggATCAAATTGCCAAGTTTTGGGAACTACAGGGATCTTCACTGAAGATACCAATGGTTGAACGTAAGGCATTGGATCTACATACACTGCATCGTATCGTGCAGGAGGAGGGTGGCATGGAGCAAACCACCAAAGAGCGTAAATGGGCAAAGGTTGCCAATCGGATGCAGTATCCATCAAGCAAGAGTGTGGGCGCTACGCTTAAAACCCACTACGAGCGTATATTGCACCCGTTTGAAGTATATACCTCTGGCAAGGTACTAGGACCTGTAGCGGTAGCTGCTGCAACGAATGTCACACAAGTAAAGCTTGAGGATGTTGGCACTGATTATAAGGCTCACGAGATACCCACTCGCCAGCAGATAGCGCcaccaaatgaaaacaatacgCGTCGCTCCAAACGCTTTGGCAACTCCACAGCCAGCTGCGGTCTTATCTGCCCCAAAACAGGTGCTATTGCTCCCATCTCTattaaaacagaaacaaaagagGATTTTAAACGCGATCTGTTAAGTAGCTTCAATGCAGTcaatgctgctgttggtgttgctggtcAAACAGCTGGTGGCGGCAGTGTTGCACTTGCTCCTAATACACGGGCCACTCAAAAGAAAGTCACCTCAGAGACACAACAACCGCTAATCGATCCACTCATGAAATATATTTGCCACATATGCAATCGGGGCGATGTCGAGGAGTCTATGCTCCTCTGCGACGGCTGCGATGATAGCTATCATACCTTCTGCCTGTTGCCACCTTTGAGCAGCATTCCAAAAGGTGAGTGGCTGTGCCCTCGTTGCGTTGTGGAAGAGGTTAGCAAGCCGCAGGAAGCCTTTGGTTTTGAGCAAGCAGAGCGGGAATATACATTGCAACAGTTTGGTCAAATGGCAGATCAGTTTAAGCAGGAATACTTTCGGAAGCCGGTACACTTGGTGCCCACTGAGCTGGTTGAACGTGAATTTTGGCGTATTGTATCCTCCATTGATGAAGATGTGACTGTTGAGTATGGCGCAGATTTGCATACAATGGATCACGGTTCAGGTTTTCCCACAAAAAGTTCACTTTACTTGCTACCCGGCGATCAGGAATATGCAGAATCTAACTGGAATTTAAATAATCTACCGCTGCTTGAGGACTCCATACTGGGACATATAAATGCGGATATAAGCGGTATGAATGCTCCGTGGATGTATGTGGGCATGtgctttgctgctttttgctgGCACAATGAGGATCACTGGAGCTATTCGATTAATTACTTGCATTGGGGTGAACCAAAGACCTGGTATGGTGTACCCGGTTCCTGTGCCGAACAATTTGAGGAGACAATGAAGCGAGCTGCACCTGAACTTTTCTCCTCACAGCCTGATTTACTTCATCAGCTTGTCACAATTATGAATCCAAACATATTGATGAATAATGGTGTTCCTGTTTATCGTACCGATCAGCATGCCGGTGAATTTGTCATAACATTTCCACGAGCCTATCATGCCGGATTTAATCAAGGCTACAATTTTGCTGAGGCAGTCAATTTTGCTCCCGCTGATTGGCTAAAAATGGGCCGGGAATGCGTCAATCATTATTCAATGCTACGTCGCTTTTGCGTCTTTTCGCATGATGAGCTGGTCTGCAAGATGGCCTTGGAACCCGCCAAGCTTACATTTGGCATTGCCACCGCTTGCTATATTGATATGGCTGAGATGGTTGACACTGAAAAGAAGCTACGTAAATCGCTTCTTGAATGGGGTGTCACACGCGCCGAACGTCGTGCATTTGAGCTGGTTAACGATGATGAACGCCATTGCCAGGAGTGTAATACAACCTGTTTCCTATCGGCCGTTGCCTGCGAGTGCAATGACAAATTGATTGTCTGCCTTCGCCATTATACAGTTCTCTGCGGTTGTGCACCAGAGAAGCATACTCTTATTTATCGCTATACGCTGGATGAGATGCCATTAATGTtgcaaaagttaaaagtaaagGCGCACAGCTTTGAGCGTTGGTTGTCACGCTGTCGCGATATTGTCGATGCACATACTCCAACATCGGTAACGCTAACTGAACTCCAGGAATTGTGCAAGGAAGCGGATACCAAAAAGTTTCCCTCATCACTACTTATTGATCGCCTAAATGCAGCATCTGTTGAAGCCGAAAAATGTGTAACTGTTATACAACAGTTGGGCATTAACAAGgtACGCACCCGGTCGGATCACAATCAGGAGGCAGCACAGTATAAACTGACAATGGAGGAATTAGAGCTTTTCGTACAGGAAATAGATAATTTGTGCTGCATCATTGATGAGGGCACATCAGTGCGTGAATTACTGGTGCTGGGAAAACAGTTTGTGGAGCGTGCGGAAATGCAGCTAGCACTTTCGCTTGAAGCGCTCGAGGAAAGTGATTTGGAGACGCTGATCAATGAGGGCAGCTCTTTGCGTATTGAGCTGCAGCAGTTGGATTTGCTGCAGAAACGTTTAAAGCAATGCAAATGGTATAAACGCTCTCAAGGATTGCGCGAGACAAGCTCCAAACTTACATATAATGATGTTAAAACGCTGTTACATAACGCTGGCGCTGATATAGATCCAACAGATCCCTATGTGGATCGTGAAATGcgaaaattgcaacaaattggcGCTGAGATTGAAGCATGGGAATCACAGGCTGCCATATATTTCCGACGATTGAATCAGCAGCATGAGTTAGCCGATATTGAGAAGTTTTTAAAGTCAGCAAGTGACATCAATGGGCAAGTACCATCACATGGTTTGCTGAAGGATGCATTACGCAAGGCACGTGAATGGCTACGTGCTGTCGAGCAATTACAGCAGAACAATCAGGTCACCTATTGTCATACGCTGGAGACGATGATTGAACGTGGTCTCAGCATACCCATTCAATTGGAGGAGCTTAGACGCATGCAGGGATATTTAAATAGTACACACCAATGGAAGGAGAATACGGCACGGGCGTTTTTAAAGAAGGGAACTTTTTATACGCTGCTTGAAGTGCTGATGCCACGTGCAGATGCCATTAATATTGACTCGGATCTCAAGCCACGTTTTCAAGATGATTTTCTCAAGGAAAAAAATCCTACGGAAATTGTGGCCAGTTTCAAGCATGCCGAGGACAAGGAATTACGCGATATGCGTGAATTACGACGTCAGAATATGGCCAAGAATCCTTTACGCGATGTCTTCTGCCTCTGTAAGTCAGATTTCCGCGCAATGATGCACAATTGTCAACTATGCCGCGATTGGTTCCATGACGATTGTGTACCACCACCAAAAACACATTCGATCACACAACAGAATGGTAGCACACTCAATGGTGTTGCATTgtcaaaacaaacacaagcCAAATGGTTGTGTCCCAGTTGTGTCCGCTCCAAACGTCCACGGTTGGAAACAATTTTACCACTTCTTGTtcagctgcaacagctgccCATTCGCCTGCCGGAGGACGAAGCGTTGCGCTGCCTTGCGGAGCGTGCTATGAACTGGCAGGATCGTGCTCGTAAAGCACTTAGCAGTCCGGATGTTAGTGCCGCCTTGGAGGCAATCctaacccaaaaacaaaagcgtCGTTCTGAAAGCAGCAGTTGCGCCGCCGCCGTCCTAGGGAACATCAGCAGTCCACGTAAGCCGCGACGCATGCACAAACAGCAGTCAAATGCGAGACGTTCAGAGTCCGATGCCGATGATGCAGATgatgtggatgatgatgacgatgatgatgaatgCCGACTACGCATTGTCGAGGATGGTGGCAGCAATGATGAGGATGAACAGCGACATACATCATCAAACGCGCAAGTCACCAGCACCACTGATCTCTTAAAGCTACTTTCCGACAGCGAAACCGAAAACCTGCTAGAGCTTATGATGGAAGGCGATCTTCTGGAAGTGTCACTTGATGAAACGAAAGAGTTATGGCGTATACTGGAAACAATACCGCCAACAATGTTGCAAGCCGAGGCTAAGACACGTGTCGCACAACAtctgcaacagcagcgccagcaacagcatcttCCACAAGCATCAACACCAACGGTCGCCTCCACCTCCAGCATACACAGTGGCGCGGATGATTCCAATGATAGCCTAATTGTGCAGAATAGTCCAAGTCCCGGAGCTGGCAGCGCCGTTACTGTTGGACGCAATAAAAAGAGACGTTCCAATGATGCTGGCAGCGGTCACAGTGCTGTGCCGCGCAAGAAGCAGAATACACCGAAACAGACACCTGGCAAGAAGTCTACACCGGTTCGCAAGAGTGAGAGTAAAGCGAGTACTTCACCCGGCGTCGATGCTGATGCGGAGAACAAACAGGCGAATGGTGGCAATACAACAGCGACCACACCCACAGCTAGCACCACAACAGGTGCCGCTGCCACACCAACACCAAATGCCGGTGGTCATAAAAAACGTAAAcgcaccacaacaacaaataacaacaataacaataacaacaacggcaacagcaattcGATTAATAGCGGCAGTACTCCAACTTCGGGAAATAGCAATCCATCTATCGGTGGTAGCACTGGTCAAAAGAAGCATGCCCAACGTACACAACAAACTGCACAGGAGGATGATGAAGAGGAATGCCGTGCAGAGAATTGTCATAAGCCCACCGGACGTGAAGTGGATTGGGTGCAATGCGATGGCGGTTGCAATGAATGGTTTCACATGTACTGTGTGGGTCTCAATCGAAGCCAGATAAAAGCTGATGATGATTACATTTGCATACGTTGCTCCAAAACGGTTAGCGTCACCATGGCTGGTGGCAGTAGCAGTCTAACGGTaagcgcaacaacaacaagcagcctAGCATTAAGTCCGGCAACACCAGGAAAGCAGCGAACAGCTCAATCGGCGCGGTAA
Protein Sequence
MSAKAEADNPAASLGGGNSNSNGTVTPARRLRTRNSTGGSGSESAKKSSSHNNNNNEAVNEVSTTATGGTPATAAITVTTSSVERPMPSVPMNHASSSVSASRKYHNSCPHPTPSVHKKPLHTKPHSTNKFDQGKNEEFHFDTPPECPVFRPTAEEFKNPLAYISKIRSIAEKCGIAKILPPEKWSPPFAVDVDKLSFIPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLHTLHRIVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKTHYERILHPFEVYTSGKVLGPVAVAAATNVTQVKLEDVGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSTASCGLICPKTGAIAPISIKTETKEDFKRDLLSSFNAVNAAVGVAGQTAGGGSVALAPNTRATQKKVTSETQQPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESNWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLTELQELCKEADTKKFPSSLLIDRLNAASVEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGTSVRELLVLGKQFVERAEMQLALSLEALEESDLETLINEGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLTYNDVKTLLHNAGADIDPTDPYVDREMRKLQQIGAEIEAWESQAAIYFRRLNQQHELADIEKFLKSASDINGQVPSHGLLKDALRKAREWLRAVEQLQQNNQVTYCHTLETMIERGLSIPIQLEELRRMQGYLNSTHQWKENTARAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKEKNPTEIVASFKHAEDKELRDMRELRRQNMAKNPLRDVFCLCKSDFRAMMHNCQLCRDWFHDDCVPPPKTHSITQQNGSTLNGVALSKQTQAKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALEAILTQKQKRRSESSSCAAAVLGNISSPRKPRRMHKQQSNARRSESDADDADDVDDDDDDDECRLRIVEDGGSNDEDEQRHTSSNAQVTSTTDLLKLLSDSETENLLELMMEGDLLEVSLDETKELWRILETIPPTMLQAEAKTRVAQHLQQQRQQQHLPQASTPTVASTSSIHSGADDSNDSLIVQNSPSPGAGSAVTVGRNKKRRSNDAGSGHSAVPRKKQNTPKQTPGKKSTPVRKSESKASTSPGVDADAENKQANGGNTTATTPTASTTTGAAATPTPNAGGHKKRKRTTTTNNNNNNNNNGNSNSINSGSTPTSGNSNPSIGGSTGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVTMAGGSSSLTVSATTTSSLALSPATPGKQRTAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530050;
90% Identity
iTF_00805748;
80% Identity
-