Dgau000230.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila gaucha
Gene Symbol
RREB1
Assembly
GCA_035045545.1
Location
JAWNOY010000011.1:737813-744663[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.0057 0.4 11.3 0.6 1 21 236 256 236 258 0.96
2 13 0.00032 0.023 15.3 0.2 1 23 268 290 268 290 0.98
3 13 7.8e-05 0.0056 17.2 7.3 1 23 296 318 296 318 0.98
4 13 0.043 3.1 8.6 0.8 2 20 530 548 530 550 0.93
5 13 0.0085 0.61 10.8 0.1 1 23 703 725 703 725 0.97
6 13 1.2e-05 0.00085 19.8 0.7 1 23 735 757 735 757 0.99
7 13 0.0008 0.057 14.0 2.0 1 23 763 786 763 786 0.97
8 13 0.0029 0.2 12.3 2.0 1 23 1031 1054 1031 1054 0.95
9 13 8.4e-05 0.006 17.1 0.3 2 23 1367 1388 1366 1388 0.97
10 13 0.14 10 7.0 6.3 1 23 1394 1417 1394 1417 0.97
11 13 3 2.1e+02 2.8 4.1 1 23 1538 1561 1538 1561 0.88
12 13 0.0082 0.58 10.8 0.5 3 23 1613 1633 1611 1633 0.96
13 13 0.0013 0.092 13.4 4.8 1 23 1639 1661 1639 1661 0.99

Sequence Information

Coding Sequence
atGCTGgccacacagcagcaacagcagcagcagccacagcagcagcagcaacacacatCAGCAGCCGTAGCTCTTGAGGATGCGGTCATGGAGCGGCAGCGCCGTGACTCGAGCACCTCGGAGTCGTCGCTGGAGCATCTGGATCTGGGTCGGACGCCAAAGaagctgagcagcagcagcggagcGCCGCagccgacgtcgacgccgcACGTTGAGGTGGCGTCGCGCAAGCGCAAgatgcgacagcagcagcagcagcagcagatcaTATACTccgaagaggaagaggagcaacagcagcagcagcaacagctgccggaGCAGTCGGGGCAGCGTATGAGGCACAAGCAGCGGCGCAGCGGCAAtgcagtcgctgccgctgccagcgCCAGCATCGTCGTCGACTACAGCGTCGGCAGCGATGCCAGTTCGCTGCGCAAAAAGTTTCGCCTCAAtcgcagcagcatcagcgccCACAACGGCGACCTCTCCGAGTCGGGCTTCGTCGACGGCAGCGCACACAGCGGCTATTTGCTCAGCGCCAGCAGCGCTGCGCAGTCGGCGTcggcagcgcagcagcaacagcagcagcaacaacagcagcagcagcagggctCGGGCAGCAGCTCGGGCGGCTCCTCGCCGCAAGGCTTGTGCCACTCGAGCGCCGAGTCGGGGATCGGCGCCGGCGACGAGCACATGAAATATGTCTGCCCCATCTGCGAGGTTGTCTCGGCCACGCCCCACGAGTTCACCAATCACATTCGATGCCACAACTATGCCAACGGCGACACCGAGAACTTCACCTGCCGCATCTGCTCCAAGGTGCTGTCGTCTGCCTCGTCCCTGGACCGACACGTCCTGGTGCACACGGGCGAGCGACCTTTCAACTGTCGCTATTGCCACTTGACCTTCACGACAAATGGCAACATGCATCGGCATATGCGAACCCAcaagcaacatcagcagcagcagactcagcagcagcagcaacagtcacagcagcaacagtcacagcagcaacagtcacagcagcaacagtcacagcagcagcagcaacagttgcagcgacagcagcaacatgcgaGCACAAATTCTGGTGCGCAGCGTGCGGAGAGCTATGAAAGTGATGCCAGCTGCTCCACGGATAtatccagcagcagcagaagcagtgctgccagcaacaacaacaacaacaacaacaacaacaacaacaacaatagtcaagcgaacaacaacaacaacaacaatagcagcgaagagcagcaactgttgctggcgTGCAAGCAGCCAAAAAcgaacatcaacaacaacaacatcatcgtTAACGACGAGCGAGAGTTGGATTCagatggagctggagctgcagctggagctggagctggggaTGCTGAGGGCGTGGATGTGACACAGATGATAACGAGCACCCCGGATGTGGCGACATTGTTGGCCAGCTCGTCGGGGCAGAGCAGTCCCGTTGGCTCGCCGGAGCCGCTGCCCAGCTGCCCCGCCTGCAATGCGGATGAGTTCGAGTCGCTGGCGGCGCTCTATGCCCACCTGGAGACGGCGCACGCCGATATACCCGCCAAGTGTCGGGAGTGCGAGGTGATTTTCGCCACGCAGCGTCAGCTGCAGGCGCACAGCTGTCGGGGATTGCAGTTGCCGCCGTTGCTGGGCGCCAGCTCGTCGCCGCTGCACAAGCAGGAGCCGGccgaagaggaggaggaggacgagcaggaggaggagcagctgcaAATTGAGCACGATGAGGACGAGGATGAGGATGTGGATGAGGATGAAGTGCGTCTGCAGGCGAATAGCGAACGCGACGAGTTCTTTCATCAGCTCTATCTCAAGGGCAAAGCGGGCTCCTCGCTGCCGTCGCCGATCAAGCACGAGCTGTTGGAGCAGCGCCAGGATCTGGCCGACATACAGAGCATCCTGCACATgaccagctccagctgcacgTCCAGCTTCCTGCGCAACTTCGAGCAGAGCGTGAACACGCCCTGCTCCAGCCAGTACAGTTTGGACGGCCGGGACGGCGAGGAGGAGGCCCAGGATGCGTTCACCAGCGAATTCCGGCGGATGAAGCTGCGCGGCGAATTCCCCTGCAAACTCTGCTCGGCCGTCTTTCCAAATCTGCGCGCCCTCAAGGGCCACAACCGGGTCCATCTGGCCGCCGTCGGCGCCGCCGGCCCCTTCCGCTGCAACATGTGCCCCTACGCCGTCTGCGACAAGGCGGCGCTCGTGCGGCACATGCGCACCCACAACGGGGATCGGCCGTACGAGTGCGCCGTCTGCAACTACGCCTTCACCACGAAGGCCAACTGCGAGCGGCATCTGCGCAATCGGCACGGCAAGACCAGCCGGGACGAGGTGAAGCGCGCCATTGTCTATCATCCGGCCGAGGATGCCAGCTGCGAGGATGTCAAGCCCAAGCTGGAGCCGGATCTGGCTGAGCTCAGCTTTCGTTCGCTCAGTCCGACGCCGTCGGCCGACGCCAGTTCCCAGCTCAAGCACATGTTGCTGGCAGAGCAGcccagcaagcagcagcagcagcagcagcagcaacagttgccgcctCCTCAGCCTGCTCTAAAGATTCAGGTCAAGAGCTTGGATCAGCTGGTGGAGAAGCCAGCGGCGGCGCCTGCCCTGGATCTCAGCATGGATGTGCTGGATCTCAGCAAGAAGCCGCAGCGCGAACATgacttgctgctgcagcaacaacagcagcagcaacagcagcagcagcaacagcagcagcagcagcaacagttgctgtttaATGCTGGCGATGCCGCAACGCAATatatgcagctgctgcggaaTTTGATGCTGCAGCAGTCGTCGGGTTTTCCGTTCTTTGGCTTGAtggcgccgccgccgccagcaGAGAAGCTGCcgatggcagcaacagcagcgacaacggcaacgccagcagcaattgctgctgtgCCGCCGAATCTGGGATTGCCGCTGCCCGCCGTCGCCGCCGGCGTCGGCGCGGGCCCCGTCAAGATGGTCATCAAGAACGGCGTGCTGATGCCCAAGCAGAAGCAGCGACGCTATCGCACCGAGCGCCCCTTCGCCTGCGAGCACTGCTCGGCGAGATTCACGCTCCGCTCCAACATGGAGCGCCACGTGAAGCAGCAACATCCGCAGTTCTATGCGCAGCGGCAGCGCAGCGGGCATCATGTGATGCGTGGGCGTGCGGCCAACTCgggtgctgcagcagcagcggcggcagcagcagcagccgcagcagcagcagcagccatgaCAAATctggcacagcagcaacagcaacagcaacagcaacatcatcagcagcagcaacatgcgcCCATCTCGGAGCAGGTGAAATATGCCATATTGGCGCAGCAGCTGAAGGCGCGCAAGGATACGGATCTGTTGCAGCAGGCGCTGGCGCATGGCTCCAGCAGTGTCGTGGTCAATCCATTGCTGCACttcagctacaacaacagcagcaacaacaacagcagcaacagcaatttgcCTTTGGCCGTGGATGATGATGAGCCGCCGAAGCTGATCATTGATGAGGATGATGAGGAGGAGTTCGATGACatcgacgaggaggaggaggaagaggacgAGGAagaggagcaacagcagcagcagcagcagcccattGAAATTGATGACAAACCTCAattgcagctgccacgcccagcgACGCCCACGCCAACGCCCACGGCCACTCCCACACAAATAGCCATTGTGGAGCCGCCCGCTGCGGAGCCGCCAACGATGAAGACCATGATTGCCCAAGCGGAATCGGTGGCCAAATCCTTGAAGGAAGTCGCCAGCTCACCGTTCAAGGATGAATCTCAGGATCTGGTGCCGGTGGCGAAGCTGGTGGACAATGCCACCAGCAATCAGGTGTCCTTCAACAGCTACTTTCGGCCGAGCGACGTGGCCAACCACATGGAGCAGAGCGACGAGGAGGGTCTAGTCGCCTCCGGCAGCGCCAGCGAGAGCAACAACTCCGGCACCGAGGAcgtcaccagcagcagcagctgcagcgagcCCAAAAAGAAGTCCGCCTACAGCCTGGCGCCGAATCGCGTCAGCTGCCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCGCTCCGTCGCCACATCCTGACGCACACGGGCCAGAAGCCCTTCAAGTGCTCCCACTGCCCGCTGCTCTTCACCACGAAGAGCAACTGCGACCGCCATCTGCTGCGCAAGCACGGCAACGTGGAGTCCGCCATGTCGGTCTATGTGCCCACCGAGGATGTCAGCGAGCCCATTCCCGTGCCCAAGTCCGTCGAGGAGATCGAGCTCGAGGAGCAGCGGCGTCGCAAGGCAGCCGAAAAGGAGCgccagctggagctggagcggGAGCGCGAACGCGAACGTGAAGTGGAACGGGAGCGtgaacgggaacgggaacgggaacgggaacgggaaaGGGAAcgggaacagcaacagctcatCCAACAGCTGACGGCGGCGGCCCAGCTCAGCCAGCAGAtggcggctgcagcagcagcagcagcagccgctgccgccacCACGAGCACAGCCGAGGCCAATGGCAGCGAGCTGCCCTACAAGTGTCACCTGTGCGAGTATTCCTTTGGGGAACGGATGCAGTGCCTCGAGCACATCAAGCAGCAGCATGCGCAGGAGTTTGCGCTGCTCCTGGCCAAAGGTGCCATCGAAACGGAACAGGAGCAGCCAACCCCTCCGACTGTCGTCGTCTCCGAGGATGAGTCGAGCACGGGACGCACTGGCGCTGGCAAATATCCGGATTACAGCAATCGCAAGGTGATCTGCGCCTTTTGCGTGCGTCGCTTCTGGTCCACCGAGGATCTGCGTCGCCACATGCGCACCCATTCCGGCGAACGGCCGTTCCAGTGCGAGATCTGCCTGCGCAAGTTCACCCTGAAGCACAGCATGCTCCGGCACATGAAGAAGCACAGTGGACGCAGTCACAATGGTGAGCAGGGCGCCTCCGATTGCTCCGACGATGAGCAGATGGCAACGCCGCCGAGCACAcccacgcccacacccacgcccacgtccacgtccatgcccatgcccatgccgatgcccagcaacaacaacaacaacaacaacacttgccacaacaacaacaatagcaacagcaagaacTTGCGTCTGCCGAAGCTGCACGAGCTGCTGGACAAGGCGAACGAATGGCGCGTGAGTCGCCTGGGCGAGCACAAGGAGAACATTGCCGAATCCTCGACGCCCACTGCGGCGAGtgcggtgggcgtggccagcggAGATTTAATTGGCAATCTGCTGGGCATCACAGATCAGGGCATACTCAACAAGCTGCTCTCCTCGCCCGACGAGGCCGCCAAATTGCTGGGCGTGGAAAAGTAA
Protein Sequence
MLATQQQQQQQPQQQQQHTSAAVALEDAVMERQRRDSSTSESSLEHLDLGRTPKKLSSSSGAPQPTSTPHVEVASRKRKMRQQQQQQQIIYSEEEEEQQQQQQQLPEQSGQRMRHKQRRSGNAVAAAASASIVVDYSVGSDASSLRKKFRLNRSSISAHNGDLSESGFVDGSAHSGYLLSASSAAQSASAAQQQQQQQQQQQQQGSGSSSGGSSPQGLCHSSAESGIGAGDEHMKYVCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQQQQTQQQQQQSQQQQSQQQQSQQQQSQQQQQQLQRQQQHASTNSGAQRAESYESDASCSTDISSSSRSSAASNNNNNNNNNNNNNSQANNNNNNNSSEEQQLLLACKQPKTNINNNNIIVNDERELDSDGAGAAAGAGAGDAEGVDVTQMITSTPDVATLLASSSGQSSPVGSPEPLPSCPACNADEFESLAALYAHLETAHADIPAKCRECEVIFATQRQLQAHSCRGLQLPPLLGASSSPLHKQEPAEEEEEDEQEEEQLQIEHDEDEDEDVDEDEVRLQANSERDEFFHQLYLKGKAGSSLPSPIKHELLEQRQDLADIQSILHMTSSSCTSSFLRNFEQSVNTPCSSQYSLDGRDGEEEAQDAFTSEFRRMKLRGEFPCKLCSAVFPNLRALKGHNRVHLAAVGAAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSRDEVKRAIVYHPAEDASCEDVKPKLEPDLAELSFRSLSPTPSADASSQLKHMLLAEQPSKQQQQQQQQQLPPPQPALKIQVKSLDQLVEKPAAAPALDLSMDVLDLSKKPQREHDLLLQQQQQQQQQQQQQQQQQQQLLFNAGDAATQYMQLLRNLMLQQSSGFPFFGLMAPPPPAEKLPMAATAATTATPAAIAAVPPNLGLPLPAVAAGVGAGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRAANSGAAAAAAAAAAAAAAAAAMTNLAQQQQQQQQQHHQQQQHAPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSVVVNPLLHFSYNNSSNNNSSNSNLPLAVDDDEPPKLIIDEDDEEEFDDIDEEEEEEDEEEEQQQQQQQPIEIDDKPQLQLPRPATPTPTPTATPTQIAIVEPPAAEPPTMKTMIAQAESVAKSLKEVASSPFKDESQDLVPVAKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSCSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRKAAEKERQLELEREREREREVEREREREREREREREREREQQQLIQQLTAAAQLSQQMAAAAAAAAAAAATTSTAEANGSELPYKCHLCEYSFGERMQCLEHIKQQHAQEFALLLAKGAIETEQEQPTPPTVVVSEDESSTGRTGAGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRSHNGEQGASDCSDDEQMATPPSTPTPTPTPTSTSMPMPMPMPSNNNNNNNTCHNNNNSNSKNLRLPKLHELLDKANEWRVSRLGEHKENIAESSTPTAASAVGVASGDLIGNLLGITDQGILNKLLSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00544675; iTF_00545423; iTF_00551780; iTF_00554566; iTF_00479659; iTF_00516459; iTF_00572781; iTF_00520110; iTF_00493840; iTF_00568433; iTF_00476818; iTF_00532572; iTF_00546844; iTF_00559679; iTF_00502720; iTF_00573504; iTF_00582432;
90% Identity
-
80% Identity
-