Danc004242.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila anceps
Gene Symbol
RREB1
Assembly
GCA_035045945.1
Location
JAWNON010000063.1:599340-605341[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.0055 0.39 11.3 0.6 1 21 246 266 246 268 0.96
2 13 0.00032 0.022 15.2 0.2 1 23 278 300 278 300 0.98
3 13 7.6e-05 0.0054 17.2 7.3 1 23 306 328 306 328 0.98
4 13 0.042 3 8.5 0.8 2 20 529 547 529 549 0.93
5 13 0.0079 0.56 10.8 0.1 1 23 705 727 705 727 0.97
6 13 1.2e-05 0.00082 19.7 0.7 1 23 737 759 737 759 0.99
7 13 0.00078 0.055 14.0 2.0 1 23 765 788 765 788 0.97
8 13 0.0028 0.2 12.2 2.0 1 23 1042 1065 1042 1065 0.95
9 13 8.1e-05 0.0057 17.1 0.3 2 23 1391 1412 1390 1412 0.97
10 13 0.14 9.6 6.9 6.3 1 23 1418 1441 1418 1441 0.97
11 13 3 2.1e+02 2.7 4.2 1 23 1559 1582 1559 1582 0.88
12 13 0.0079 0.56 10.8 0.5 3 23 1647 1667 1645 1667 0.96
13 13 0.0013 0.089 13.3 4.8 1 23 1673 1695 1673 1695 0.99

Sequence Information

Coding Sequence
atgctggccacacagcagcaacagcaacagcagccaccacagcaacatacagcagcaacagcagcggcagcagcagcagcagtaactcTTGAGGATGCGGTCATGGAGCGACAGCGTCGTGACTCCAGCACCTCGGAGTCGTCGCTGGAGCATCTGGATCTGGGTCGCACGCCAAAgaagctgagcagcagcagcggtgcGCCGCAGCCGACGTCGACGCCGCACGTTGAGGTGACGTCGCGTAAGCGCAAgatgcgacagcagcagcaacagcagcagcagcaaatcttGTACTCTGACGAGGAGgacgaacaacagcaacagcagcaacagcaacagcagcagcagcagttgctggaGCAGTCGGTGCATCGCATACGCCACAAGCAGCGCCGCAGCGGCAAtgcagtcgctgccgctgccagcgccagcaTCGTTGTCGACTACAGCATCGGCAGCGATGCCAGTTCGCTGCGCAAAAAGTTTCGCCtgaatcgcagcagcagcagcatcagcgccCACAACGGCGACCTCTCCGAGTCAGGCTTCGTCGATGGCAGCGCACACAGCGGTTATTTGCTCAGcgccagcagcgcagcgcagtcGGCGacggcagcgcagcagcaacagcagcagcagccgggtTCGGGCAGCAGCTCGGGCGGCTCCTCGCCGCAAGGCCTGTGCCATTCGAGCGCCGAGTCCGGCATCGGCGCTGGCGACGACCACATGAAATACGTCTGCCCCATCTGCGAGGTTGTCTCGGCCACGCCCCACGAGTTCACCAATCACATTCGATGCCACAACTATGCCAACGGCGACACCGAGAACTTCACCTGCCGCATTTGCTCCAAGGTGCTCTCGTCGGCCTCCTCGCTGGACAGACACGTCCTGGTGCACACCGGGGAGCGGCCCTTCAACTGTCGCTATTGCCACTTGACCTTCACGACAAACGGCAACATGCATCGGCACATGCGCACGCAcaagcaacatcagcagcatcagcagcagcagcagcagacacaacagcaacagacacagcagcaacagccagcacagcaacaacagccaacacagcagcagcagcagcaacagttgcagcgaCATCAGCAACATGCGTCAGCAAATGCCGTGACGCAACGTGCCGAGAGCTATGAGAGCGATGCCAGCTGCTCCACGGATAtatccagcagcagcagcgcagccagcagcgcagctagcaacaacaacaacaacaacagtagccaAGCGAACAACAACCACGAAGAGCAGTTGCTGTCgtgcaagcagcaacagctgaaaacgaacatcaacaacaacaacatcattgTGAGCGACGAGCGAGCGCTGGACACAGACGGCGACGAGGCTGTCGATGCGGAGAGCGTGGATGTGACACAGATGATAACGAGCACGCCGGACGTGGCGACGCTGCTGGCCACATCGTCGGGCGGCAGCAGCCCGAGCACGCCCGAGCATGAGTCGACGGCGCTGCCCAGCTGTCCCGCCTGCAGTGCGGATGAGTTCGAGACGCTGGCGGCGCTCTATGCCCACTTGGAGACGGAGCATGCGGACATACCCGCCAAGTGTCGCGAGTGCGAGGTAATCTTTGCCACGCAGCGTCAGCTGCAGGCGCACAGCTGTCGCGgcctgcagctgccgccgctgctgggCGCCAGCTCCTCGCCGCTGCACAAGCAGGAGCCAGcggagcagcaggaggaacAGCAGGAGGAAGACGATGAagaacagcagcggcagcatgaGGCCGAGACCCAGcctgacgacgacgatgaggaaGAGTTGCGGCTGCAGGCGAACAGCGAACGCGACGAGTTCTTTCAGCAACTGTATCTGAAGGGCAGATCGGGCAGCTGCTCGCTGCCGTCGCCCATCAAGCACGAGCCGTCGGAGCAGCGCCAGGATCTGGCCGACATCCAGAGCATACTGCACAtgaccagctccagctgcacgTCCAGTTTCTTGCGCAACTTCGAGCAGAATGTGAACACACCCTGCTCCAGCCAGTACAGTCTGGATGGCCGTGATGGCGAGGAGGAGGCCCAGGATGCCTTCACCAGCGAATTCCGGCGCATGAAACTGCGCGGCGAATTCCCCTGCAAACTGTGCACCGCCGTCTTTCCCAATCTGCGCGCCCTCAAGGGCCACAATCGCGTCCATCTGGCGGCGGTGGGCGCCGCCGGGCCCTTTCGCTGCAACATGTGTCCCTATGCCGTCTGCGACAAGGCGGCTCTGGTGCGGCACATGCGCACCCACAACGGCGATCGGCCGTACGAGTGCGCCGTCTGCAACTACGCCTTCACCACGAAGGCCAACTGTGAGCGGCATCTGCGCAATCGTCATGGCAAGACCAGCCGTGACGAGGTGAAGCGTGCGATCGTCTATCATCCGGCGGAGGATGCCAGCTGTGAGGAGATCAAGCCCAAAATGGATCCGGATCTGTCGGATGTCAGCTTTCGTTCGCTCAGCCCGTCGCCGTCGGTGACAAATGTCGAGACCAGCTCACAGCTGAAGCACATGCTGCTGGCAGAGCAGcccagcaagcagcaacagcagcagcagcagacgtcgCAGCAGCCGTCGCAGCAGCCGCCATTGAAGATTCAGGTGAAGAGCTTGGATCAGCTGGTGGAGAAGCCGCTGGCGCCAGCCATGGATCTCAGCATGGATGTGTTGGATCTCAGCAAGAAGCCGCAGCGCGAACATGAGCTGCtcttgcagcaacagcaacagcagcaacaacagcaacaacagcagcaacagcagcagcagcaacagttgctctTCAATCCGGGCGATGCAGCCACGCAGTATATGCAGCTGTTGCGCAATTTCATGCTGCAGCAGTCGTCCGGGTTTCCGTTCTTCGGGCTGATGgggccgccgccgccgtcagcagctgctgcgctggACAAGTCAGCTTCAGCCGTTGCGCtgccagcgacagcagcaacagttgctgcagtggcaccgccgccgccgccgccgttgccgttgccattgggTCTGCCATTGCCAGCGGCCGGACCCGTCAAGATGGTCATCAAGAACGGCGTGCTGATGcccaagcagaagcagcgtcGCTATCGCACCGAACGGCCCTTCGCCTGCGAGCACTGCTCGGCCAGGTTCACGCTGCGCTCCAACATGGAGCGCCACgtcaagcagcagcatccgcaGTTCTatgcgcagcggcagcgcagcGGGCATCACGTGATGCGTGGCCGGGCGGCCAATGCGGGTGCAGcacaagcagcggcagccgcagcagcagcggcggcagcagcagccgcagcagcagccatgacaaatctgcagcagcaacaccaacagcaacagcagcagcaacatgcacCCATATCGGAGCAGGTGAAATATGCGATTCtggcgcagcagctgaaggCGCGCAAGGATACGGATCTGTTGCAGCAGGCGCTGGCGCATGGCTCCAGCAGCGTCGTGGTCAATCCCTTGTTGCAGCACTTTGGctacaacggcaacggcagcaacagcggcagcaacagcaacagcaatcagcagcagcagcaacagttgccagttgcggATGATGATGAGCCGCCCAAGCTGATCATTGACGAAGATGATGAGGATGACTTCGATGACATagacgaggaggaggaggaagaggaggaggaagaagaGTTTGACCAagacgaacagcagcaacagcagcagcaacagcaacaggaggaggagcagcagcaggtggagCAAGTGCAGCAGATTGAACTGGATGCCAAAGACGAGCCAGAGCCGGCCGTGGAGCTGGGTGAGGCGAAAGCGAAGCCAGGCGGCGAGCCGACTACTATGAAGACAATGATTGCGCAAGCCGAGTCGGTGGCCAAGTCCCTGAAGGACGTGGCCAGCTCGCCGTTCAAGGACGAATCTCAGGATCTGGTACCGGTGGCCAAGCTGGTGGACAATGCCACCAGCAACCAGGTGTCCTTCAACAGCTACTTCCGGCCCAGCGACGTGGCCAATCACATGGAGCAGAGCGACGAGGAGGGCCTGGTCGCCTCCGGCAGCGCCAGCGAGAGCAACAATTCCGGCACCGAGGAcgtcaccagcagcagcagctgcagcgagcCCAAAAAGAAGTCCGCCTACAGCCTGGCGCCCAATCGCGTCAGCTGCCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCGCTGCGTCGCCACATCCTCACCCATACCGGCCAGAAGCCATTCAAGTGCTCGCACTGTCCGCTGCTGTTCACCACGAAGAGCAACTGCGATCGCCATCTGCTGCGCAAGCATGGCAACGTTGAGTCGGCCATGTCGGTCTACGTGCCCACCGAGGATGTCAGCGAGCCAATACCCGTGCCCAAGTCGGTCGAGGAGATTGAGCTGGAGGAGCAGCGTCGCCGCAAGGCCGCCGAAAAGGAGcgtcagctggagctggagcgtgAACGGGAACGTGAACGCGAGCTGGAGCGGGAGCGTGAGCTGGAGCGTGAgcgcaagcagcaacagctcatcCAGCAGCTGACGGCGGCGGCACAGCTCAGCCAGCAAATGGTGGCAGCGGCGCAggcagcggccgcagcagcagccagcaacagcggcggcgtCGTCGCCGGCGCCGAGGCCAACGGCAGCGAGCTGCCCTACAAGTGTCACCTGTGCGAGTATTCGTTTGGCGAACGGATGCAGTGCCTCGACCACATCAAGCAGCAGCATGCGCAGGagtttgcgctgctgctggccaaaggCGCCATCGAAACGGAGCaggagacagcagcagcagcagcaacagttgctgctgcggctgcggctgctgctgctgccaactcAGCTGCCGTCTCTGAGGACGAGTCGAGCACGGGACGCAGCGCTGGCAAATATCCCGACTACAGCAATCGCAAGGTGATCTGCGCCTTTTGCGTGCGCCGCTTCTGGTCCACGGAGGATCTGCGCCGGCATATGCGCACCCACTCGGGCGAACGGCCGTTCCAGTGCGAGATCTGTCTGCGCAAGTTCACGCTGAAGCACAGCATGCTCCGGCACATGAAGAAGCACAGCGGACGCAGTCACAATGGTGAGGCGGGCGCCTCCGACTGCTCCGATGATGAGCAAATGGCAACGCCGCCAACAACGCCAACGCCCACggccatgcccatgcccatgcccatgccaatgccaatgcccatgcccagcaacaacaacaacaacaacaacaacacttgccacaacaacaacaacaaccacaacaacagcagcagcaagagctcACGCCTGCCCAAGCTGCACGAGCTGCTGGACAAGGCGAACGAGTGGCGCGTTAGCCGTCTCGGCGAGCACAAGGAGAACATTGCCGAATCCTCAAcgcccacaacagcagcagcaacagcagcagcagcagctgtgggcgtggccagcggCGATTTTCTCGGCAATCTGCTGGGCATCACCGACCAGGGCATACTGAACAAGCTGCTCAGCTCGCCCGACGAGGCGGCCAAATTGCTGGGCGTCGACAAGTGA
Protein Sequence
MLATQQQQQQQPPQQHTAATAAAAAAAVTLEDAVMERQRRDSSTSESSLEHLDLGRTPKKLSSSSGAPQPTSTPHVEVTSRKRKMRQQQQQQQQQILYSDEEDEQQQQQQQQQQQQQLLEQSVHRIRHKQRRSGNAVAAAASASIVVDYSIGSDASSLRKKFRLNRSSSSISAHNGDLSESGFVDGSAHSGYLLSASSAAQSATAAQQQQQQQPGSGSSSGGSSPQGLCHSSAESGIGAGDDHMKYVCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQQHQQQQQQTQQQQTQQQQPAQQQQPTQQQQQQQLQRHQQHASANAVTQRAESYESDASCSTDISSSSSAASSAASNNNNNNSSQANNNHEEQLLSCKQQQLKTNINNNNIIVSDERALDTDGDEAVDAESVDVTQMITSTPDVATLLATSSGGSSPSTPEHESTALPSCPACSADEFETLAALYAHLETEHADIPAKCRECEVIFATQRQLQAHSCRGLQLPPLLGASSSPLHKQEPAEQQEEQQEEDDEEQQRQHEAETQPDDDDEEELRLQANSERDEFFQQLYLKGRSGSCSLPSPIKHEPSEQRQDLADIQSILHMTSSSCTSSFLRNFEQNVNTPCSSQYSLDGRDGEEEAQDAFTSEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRVHLAAVGAAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSRDEVKRAIVYHPAEDASCEEIKPKMDPDLSDVSFRSLSPSPSVTNVETSSQLKHMLLAEQPSKQQQQQQQTSQQPSQQPPLKIQVKSLDQLVEKPLAPAMDLSMDVLDLSKKPQREHELLLQQQQQQQQQQQQQQQQQQQQLLFNPGDAATQYMQLLRNFMLQQSSGFPFFGLMGPPPPSAAAALDKSASAVALPATAATVAAVAPPPPPPLPLPLGLPLPAAGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRAANAGAAQAAAAAAAAAAAAAAAAAMTNLQQQHQQQQQQQHAPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSVVVNPLLQHFGYNGNGSNSGSNSNSNQQQQQQLPVADDDEPPKLIIDEDDEDDFDDIDEEEEEEEEEEEFDQDEQQQQQQQQQQEEEQQQVEQVQQIELDAKDEPEPAVELGEAKAKPGGEPTTMKTMIAQAESVAKSLKDVASSPFKDESQDLVPVAKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSCSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRKAAEKERQLELERERERERELERERELERERKQQQLIQQLTAAAQLSQQMVAAAQAAAAAAASNSGGVVAGAEANGSELPYKCHLCEYSFGERMQCLDHIKQQHAQEFALLLAKGAIETEQETAAAAATVAAAAAAAAAANSAAVSEDESSTGRSAGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRSHNGEAGASDCSDDEQMATPPTTPTPTAMPMPMPMPMPMPMPSNNNNNNNNTCHNNNNNHNNSSSKSSRLPKLHELLDKANEWRVSRLGEHKENIAESSTPTTAAATAAAAAVGVASGDFLGNLLGITDQGILNKLLSSPDEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00512904;
90% Identity
-
80% Identity
-