Dpse008014.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila pseudotalamancana
Gene Symbol
RREB1
Assembly
GCA_037075185.1
Location
JBAMCK010000622.1:2162-8328[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.0055 0.38 11.3 0.6 1 21 244 264 244 266 0.96
2 13 0.00031 0.022 15.2 0.2 1 23 276 298 276 298 0.98
3 13 7.5e-05 0.0053 17.2 7.3 1 23 304 326 304 326 0.98
4 13 0.03 2.1 9.0 1.1 2 22 546 566 546 569 0.89
5 13 0.0078 0.54 10.8 0.1 1 23 720 742 720 742 0.97
6 13 1.1e-05 0.0008 19.7 0.7 1 23 752 774 752 774 0.99
7 13 0.00077 0.054 14.0 2.0 1 23 780 803 780 803 0.97
8 13 0.0028 0.19 12.2 2.0 1 23 1060 1083 1060 1083 0.95
9 13 8e-05 0.0056 17.1 0.3 2 23 1401 1422 1400 1422 0.97
10 13 0.14 9.4 6.9 6.3 1 23 1428 1451 1428 1451 0.97
11 13 2.8 2e+02 2.7 4.1 1 23 1575 1598 1575 1598 0.88
12 13 0.0079 0.55 10.8 0.5 3 23 1653 1673 1651 1673 0.96
13 13 0.0012 0.087 13.3 4.8 1 23 1679 1701 1679 1701 0.99

Sequence Information

Coding Sequence
ATGCTGgccgcacagcagcaacagcagcagcagccacagcagcaacacacatcagcagcagtagctCTAGAGGATGGGGCTATGGAGCGGCAGCGTCGGGACTCGAGTACCTCGGAGTCCTCGCTTGAGCACCTGGACCTGGGTCGTACGCCAAAGAAgctgagcagcagcggcggcgcaCCACagacgacgtcgacgccgcaCGAGGCGACGTCGCGCAAGCGAAAGATGCGCCAGcagcagtcacagtcgcagtcgcagtcgcagcagcaactgttgttcTCCGACGAAGAtgaagagcaacagcagcagcagcagcagcaacagtcgacACAGCTGCTCGACCAGTCAGCGCAACGAATGCGCCATAAGCAGCGACGCAGCGGAAATGcggtcgctgccgctgccagcgcCAGCATCGTTGTCGACTATAGCGTCGGCAGCGATGCCAGTTCGCTGCGCAAAAAATTTCGACTGaaccgcagcagcatcagcaccaaTAACGGTGAACTCTCGGAGTCTGGCTTTGTCGATGGCAGCGCGCATAGCGGCTACTTGCTGAGCGCCAGCAGCGCAGCGCAATCAGCGTtggcagcgcagcagcaacagcaacaactgcagctccagcagcagcagggctCGGGCAGCAGCTCTGGCGGCTCCTCGCCTCAGGGCTTGTGCCACTCAAGCGCCGAGTCCGGTATCGGCGCCGGCGACGAGCATATGAAATACGTCTGCCCCATCTGCGAGGTGGTCTCGGCCACGCCCCACGAGTTCACCAATCACATTCGGTGTCACAACTACGCCAACGGCGACACCGAGAACTTCACCTGCCGTATCTGCTCCAAGGTGCTGTCGTCTGCCTCCTCGCTGGACAGGCACGTGCTTGTACACACTGGCGAGCGTCCGTTTAACTGTCGCTATTGCCATTTGACATTCACAACGAACGGCAACATGCATCGGCAtatgcgcacacacaaacaacatcagcagcagcagcaacaggcgcagacgcagcagcaacattcgctgcagtcacagcagcaacaacagtcgccgcagcaacagccacagcagcaacagttgcaggcgtcgtcgcagcagcaacagttgccactacaacagcaacaaaactcAGTTGCCAGCTACGAGAGCGATGCCAGCTGCTCCACGGATAtatccagcagcagcagcagcgctagcaataacagcaacaacaacaataataataataataaaaataataataataataataataacagcaaccatgcgaacaacaacagcagcaacgaggagcagcagcaactgttgctggcgtgcaagcaacagcagcagcagcagctgaaaaccaacatcaacaacaacaacatcatcgtCAGCGACGAGCGAGACTCACAGAATGCAGATCCAGACGCGAatgtggatgcggatgcggatgcggatgctgaGAGCGTGGACGTGGCACAGATGATAACCAGCACTCCAGACGTTGCCACATTGCTGGCGTCCGGCAACAGCAGCCCCGCCTCAATGGAGCCGCTGCACAGCTGCCCCGCCTGCAATGCGGATGAGTTTGAATCCCTGTCCGCACTGTATGCCCATCTGGAGTCCGAGCATGCGGATATACCCGCCAAGTGTCGCGAATGCGAGGTAATCTTTGCCACCCAGCGTCAGCTGCAGGCGCACAGCTGTCGCGCGCTCCatttgccgccgctgctgggGTCCAGCTCCTCGCCGCTGCACAAGCAGGAGCCGCTGGACGAggatgacaatgacaatgacaatgatgatgaagacgaggacgaggatgaCCGGCCGGAGCACCTGGAGGACGATGTCGATGCTGCTGTCCGCCTGCAATCGAACAGCGAACGGGACGAATTCTTTCAGCAATTGTATCTGAAGGGCAAGTCCGGCTCCTCGTTGCCGTCGCCGATCAAGCACGAGCCGTCGGAGCAGCGCCAGGATCTGGCCGATATCCAGAGCATTCTCCACATGACCAGCTCCAGTTGCACGTCCAGCTTTCTACGCAACTTCGAGCAGAATGTGAATACGCCATGCTCCAGCCAATACAGCTTGGACGGACGCGACTGCGAGGAGGAGGCCCAGGATGCCTTCACCAGCGAGTTCCGGCGGATGAAGCTGCGCGGCGAATTCCCCTGCAAGCTCTGCACGGCCGTATTCCCCAATCTGCGCGCCCTCAAGGGCCACAATCGCGTCCATTTGGCCTCAGTGGGTGCCGCCGGTCCCTTCCGGTGCAACATGTGTCCGTACGCCGTATGCGACAAGGCGGCTCTGGTGCGGCACATGCGCACCCACAACGGGGATCGTCCGTACGAGTGCGCCGTATGCAATTATGCCTTCACCACGAAGGCCAACTGCGAGCGGCATCTGCGCAATCGTCACGGCAAGACCAGCCGGGACGAGGTAAAGCGTGCCATTGTCTATCATCCGGCGGAGGATGCCAGCTGCGAGGACGTCAAGCCCAATATGCGTCTCTCCTCCGAGCAGGATCTGGCAGAGCTCAGCTACCGCTCGCTTAGCCCTCCTCCGGCAGAGTCCAAGTCGCAGCTGAAGCACATGTTGCTGGCGGAGCAGAagacacagcagcaacagcaacagttgccgccgcagcagcagcagcaacaacagcagcagccgccgccgccgcttaAGATTCAGGTTAAGAGCTTGGATCAGCTGGTGGAGAAGCCGCTGGCCATGGATCTCAGCATGGATGTGCTGGATCTCAGCAAGAAGCCGCAGCGGGAGCACGAATTGctaatgcagcagcaacaacagcaacaacagcagcaacaacaacagcagcaacaacaacagcagcagcaacaacagcagcagcaacagttgctcttCAATCCCGGCGACGCAGCCACGCAGTATATGCAACTGCTCCGGAATTTAATGCTGCAGCAATCTCCGGGCTTTCCGTTCTTTGGGCTGATGGCGCCGCCTGCCGCCCTGGAGAAGCCAGCTGCAGCACTTGCTGGCGGAGCAGCCGGCACGGCGGCAACAATTGCCGCCACGGCGCCGCCATTGGGTCTGCCACTGCCCGGACCCGCTGTCGGTCCCGCCGGACCCGTCAAGATGGTCATCAAGAACGGCGTCCTGATGcccaagcagaagcagcgacgCTATCGCACCGAGCGACCCTTCGCCTGCGAGCACTGCTCGGCAAGATTCACGCTCCGCTCCAACATGGAGCGGCATgtgaagcagcagcatccgCAGTTCTATGCCCAGCGGCAGCGCAGCGGACACCACGTGATGCGTGGCCGTGCCGCCAACTCCgccggcgcagcagcagcggcggcggcagcagcggccgcagcagcagcggcagcggcgatGACGAATCTtgcccagcaacaacatccgCCGATCTCGGAGCAGGTCAAATATGCGATATTGGCGCAGCAGCTGAAGGCGCGCAAGGACACGGATTTGTTGCAGCAGGCGCTGGCGCACGGCTCCAGCAGCGTGGCAGTCAATCCTCTGCTGCATTtcggctacaacaacaacaacagcaatggcaacaacaacaccattagcagcagcaacaacaacaatgcggaTGACGATGAGCCACCGAAGCTGATCATCGACGAGGATGACGAGGAGGAGTTCGATGATgtggacgaggaggaggaggacgaggaggagctggacgaggagcaggaggagcaacaacaaccacaacagcagcagcagcagcagcagcaattggagcaactgcagcagccggCAATCCACATCGAAtccaagcaacagcagcagcaagatttgccacgccccgccacgcccaccattGAGGCGGAGAAGCAGCCGGAAACAAAGCCCTTGGCGCCCACCACAATGAAAACAATGATTGCCCAAGCGGAGTCGGTGGCCAAGTCGTTGAAGGAGGTGGCAAGCAGTCCGTTCAAAGATGAATCTCAGGATCTGGTGCCGGTGGCCAAGCTGGTGGACAACGCCACCAGCAATCAGGTGTCCTTCAACAGTTACTTTCGTCCCAGCGACGTGGCCAACCACATGGAGCAGAGCGACGAGGAGGGCCTCGTTGCCTCCGGCAGCGCCAGCGAGAGCAACAACTCCGGCACGGAGGATgtgaccagcagcagcagctgcagcgagcCCAAAAAGAAATCCGCCTACAGCCTGGCCCCGAACCGAGTCAGCTGTCCGTACTGCCAGCGCATGTTCCCATGGAGCAGCTCGCTGCGTCGCCACATCCTCACCCACACCGGCCAGAAGCCGTTCAAGTGCTCCCACTGCCCGCTCCTGTTCACCACGAAGAGCAACTGCGACCGCCATCTGCTGCGTAAGCACGGCAACGTGGAGTCCGCGATGTCCGTCTATGTGCCCACCGAGGATGTCAGCGAGCCGATCCCGGTGCCCAAGTCCGTGGAGGAGATcgagctggaggagcagcgGCGACGCAAGGCGCTCGAAAAGGAGCgccagctggagctggagcgggagCGCGAGCGTGAACGGGAGCAGGAGCGTGAACGGGAGCGAGAACGCGAACTGGAGCGTGAGCGGGAAcgggaacagcagcagctcatccAGCAGCTGACGGCGGCTGCGCAGCTGAGCCAGCAaatggcggcagcggcagcagcagccaattcagcagcggcagcagcggcagcatcggCGAATCCGGCCGAGGCGAGCAACGGCAGCGAGCTGCCATACAAGTGTCATCTGTGCGAGTACTCATTCGGCGAGCGGATGCAGTGCCTCGAGCACATCAAGCAGCAGCATGCCCACGAGTTCGccctgctgctggccaaaggCGCCATCGAAACGGAGCAGGAGGcagtgcagcaacagcaacagcagcagtcacTCCCTGCTGGCTCCGAGGATGAGTCGACAGCCGGACGTGCCGGCAAATATCCGGACTACAGCAATCGGAAAGTCATTTGCGCTTTCTGCGTCCGCCGCTTCTGGTCAACGGAGGATCTGCGCCGTCATATGCGCACCCACTCCGGCGAACGGCCGTTCCAGTGCGAGATCTGCCTGCGAAAGTTCACCCTGAAGCACAGCATGTTGCGCCACATGAAGAAGCACAGCGGACGGAGCCACAATGGAGAGCAAGGAGCCTCCGACTGCTCCGACGATGAGCAAATGGCAACGCCGCCcaccacgcccacacccacgGTCACGCCCATGCCCACAGTcatgcccaacaacaacaataacaataataataacaacaacaataataataacaataacaacaacacttgccacaacaataacaacaacaacaacaataacaataacaaacgtCTACCAAAGCTTCACGAGCTGCTGGACAAGGCGAACGAATGGCGCGAGAGTCGCCACGGCGAGCAAAAGGAGAACATTGCCGAGGCCACGCCTTCAGCGGGGGCGGCAGCTACCGTAgcggcggtgggcgtggcaggcggaGATCTGATTGGAAATCTTTTGGGGATCACAGATCAGGGGATACTCAATAAGCTGCTCTCCTCGCCCGACGAGGCGGCCAAACTGCTGGGCGTGGAAAAGTAA
Protein Sequence
MLAAQQQQQQQPQQQHTSAAVALEDGAMERQRRDSSTSESSLEHLDLGRTPKKLSSSGGAPQTTSTPHEATSRKRKMRQQQSQSQSQSQQQLLFSDEDEEQQQQQQQQQSTQLLDQSAQRMRHKQRRSGNAVAAAASASIVVDYSVGSDASSLRKKFRLNRSSISTNNGELSESGFVDGSAHSGYLLSASSAAQSALAAQQQQQQLQLQQQQGSGSSSGGSSPQGLCHSSAESGIGAGDEHMKYVCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQQQQQQAQTQQQHSLQSQQQQQSPQQQPQQQQLQASSQQQQLPLQQQQNSVASYESDASCSTDISSSSSSASNNSNNNNNNNNKNNNNNNNNSNHANNNSSNEEQQQLLLACKQQQQQQLKTNINNNNIIVSDERDSQNADPDANVDADADADAESVDVAQMITSTPDVATLLASGNSSPASMEPLHSCPACNADEFESLSALYAHLESEHADIPAKCRECEVIFATQRQLQAHSCRALHLPPLLGSSSSPLHKQEPLDEDDNDNDNDDEDEDEDDRPEHLEDDVDAAVRLQSNSERDEFFQQLYLKGKSGSSLPSPIKHEPSEQRQDLADIQSILHMTSSSCTSSFLRNFEQNVNTPCSSQYSLDGRDCEEEAQDAFTSEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRVHLASVGAAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSRDEVKRAIVYHPAEDASCEDVKPNMRLSSEQDLAELSYRSLSPPPAESKSQLKHMLLAEQKTQQQQQQLPPQQQQQQQQQPPPPLKIQVKSLDQLVEKPLAMDLSMDVLDLSKKPQREHELLMQQQQQQQQQQQQQQQQQQQQQQQQQQQLLFNPGDAATQYMQLLRNLMLQQSPGFPFFGLMAPPAALEKPAAALAGGAAGTAATIAATAPPLGLPLPGPAVGPAGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRAANSAGAAAAAAAAAAAAAAAAAMTNLAQQQHPPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSVAVNPLLHFGYNNNNSNGNNNTISSSNNNNADDDEPPKLIIDEDDEEEFDDVDEEEEDEEELDEEQEEQQQPQQQQQQQQQLEQLQQPAIHIESKQQQQQDLPRPATPTIEAEKQPETKPLAPTTMKTMIAQAESVAKSLKEVASSPFKDESQDLVPVAKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSCSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRKALEKERQLELEREREREREQERERERERELEREREREQQQLIQQLTAAAQLSQQMAAAAAAANSAAAAAAASANPAEASNGSELPYKCHLCEYSFGERMQCLEHIKQQHAHEFALLLAKGAIETEQEAVQQQQQQQSLPAGSEDESTAGRAGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRSHNGEQGASDCSDDEQMATPPTTPTPTVTPMPTVMPNNNNNNNNNNNNNNNNNNNTCHNNNNNNNNNNNKRLPKLHELLDKANEWRESRHGEQKENIAEATPSAGAAATVAAVGVAGGDLIGNLLGITDQGILNKLLSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00512904;
90% Identity
-
80% Identity
-