Papo004473.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Parnassius apollo
Gene Symbol
nfxl1
Assembly
GCA_907164705.1
Location
CAJQZP010000280.1:639288-641762[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 2 2.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 16 0.13 1.8e+03 -0.3 0.4 4 10 169 175 168 175 0.95
3 16 3.1e-07 0.0044 17.6 15.9 3 19 186 202 185 202 0.95
4 16 8.3e-08 0.0012 19.5 16.9 3 19 239 255 227 255 0.91
5 16 4.4e-09 6.3e-05 23.5 11.9 1 19 290 308 290 308 0.98
6 16 1.6e-06 0.022 15.4 19.3 3 19 345 361 337 361 0.86
7 16 1.1e-05 0.15 12.7 18.0 1 18 395 412 395 413 0.97
8 16 2.9e-09 4.1e-05 24.1 15.8 1 19 422 440 422 440 0.98
9 16 0.00037 5.3 7.8 6.6 9 19 488 498 486 498 0.89
10 16 0.0021 30 5.4 8.7 1 12 508 518 508 518 0.96
11 16 0.31 4.4e+03 -1.5 3.5 14 18 547 551 547 552 0.87
12 16 0.099 1.4e+03 0.1 0.5 7 12 567 572 567 579 0.83
13 16 1.4e-05 0.2 12.4 3.8 1 11 588 598 588 599 0.97
14 16 0.00037 5.3 7.8 16.9 3 18 629 645 628 646 0.82
15 16 0.58 8.2e+03 -2.4 1.4 10 16 676 682 674 683 0.78
16 16 0.0001 1.5 9.6 10.7 1 16 687 701 687 706 0.93

Sequence Information

Coding Sequence
ATGGCACGTAGATATCGCGACGCTGCTGCTAAATTGCAGCAAAATGTACAAAAACATTTAAAGGAAATGAAGGAATTTTCATCGTCTGATGATGAGGAACCCTTTGAAACTAGCTTACTAGATGGTGTATTACAAAGCTATTGGAGAGGTGGAGGCGACACACAAATGCTTAATAGaacaaaaaatttattagaaGAAGCGATTAGCGGTCGAAATATCACTTGTCTTATTTGCATAGGGTCTATTAAACGAGCTCACGCCATATGGAATTGTGACTATTGCTACTCTTATTTTCACCTGTCTTGCATACAAAAGTGGGCAAACGACTGCGTGAGTCTCAAAAGCGATGATACTCAAGGACCAATTGCTGTTTTTGTTCCAAGAAAAATTGAATGGTGTTGCCCAAAATGTAGACATTCATACAGCAAAGATGAAATTCCGCGTAAATACCGATGTTTCTGTGGTAAAACTGACAATCCACCCCTTCACCCCTGGCTGATACCACATTCCTGTGGTGAAATTTGTGAAAAAAGACTTTCATCGGGGAATCATTGTAAACATAAGTGCCTTCTGCTCTGCCACCCTGGGCCTTGCCCTCCATGCCCACAAATGGTTAATGGAGTTTGCTATTGTGAGAAAGAACATAAAAAAGTAAGATGTAGTACTGGAAGATGGTCTTGTGGACAACAATGTAAGCAAATACTTCCATGCAAATCACACAAGTGTGAGAATGTATGCCATGATGGTGATTGTCCTCCATGCAGTTATACAAGCTTACAACCATGTCAGTGTGGGGCTGAAAAAGTAAGACGTCCATGCAATGATTTAGAATGGCAGTGTAATAAGAAATGTAACAAACCATTTTCATGTGGATACCACAAATGTGAAAATATATGCCATTCTGGCAACTGTGGATTATGTCCAAATTCCGGTTTAATGTCCTGCCCATGTGGGGCAAATCAACGTTATGTACAATGTCCAGATATGATGGAAACATGTTTAAGTACTTGTGGTAAGAAACATGAAAACTGTGAACATAACTGCCCAGAAAAATGCCATAAAGGTCCATGTCCTCCTTGCCAGGTTCTAATTGAGAAGAAATGCCAATGCTCAACGCACACTAGGTCACTACCTTGCAGTAAAGAATTCAAGTGTGACACAAAGTGCAGGGGCACTCGCCCCTGTGGTAAACATGCATGTGGACGTAGGTGTTGCAATGGTAACTGTCCACCATGTGAAAAAATTTGTGATAAGCCATTACAGTGCGGCCGTCACAAATGCACCTCAGTTTGTCATCATGGTCCTTGTTATCCTTGTTCTAGGGAATCAAAAATAACCTGTAGATGTAAAGAAACATATGTCACTGTGCCTTGTGgcagagaaaaaaatataaaaccacCAAAATGCAGTCTCCCTTGTAAGATTAAATATAAATGTGGCCATATAGAGGAAAACAAACATTCATGCCACTTTGGTGAATGTCCACCTTGCAAAGCAATATGCTTCAAGACCTACCAAAAGTGTGGTCATCAGTGTAAAGCTACATGCCACGAATATGTAACACTTGTATTTAAGCAAGTTAAAAAACCTGCAACACCATGGGAAATACAGCCTCCTAAGTCTAAAATAATGACATTAGATTGTCCTCCATGTGAGATGCCTGTGCTAGTAACTTGTTTTGGTGAACATGAGACAGAACAACAACCATGTCATTCCGCATCTAGACGACCATGTGGCCGAGAATGTGGTCGCCCTCTTGAATGCGGTAATCATTCTTGTATACTTCTCTGCCATTTATTTACTTACAATCCTGATTATCCTAATGTGCCTTATAAATGTAAACAATGTGATAACGAATGTTTGGCAGTCCGTCCAGAAAAATGCACTCATAAATGTGCAAAACGTGGTTGTCACCCTGGACCCTGTCCTCCATGTGAAATATTTGAGCGCATCCGCTGTCATTGTGGTGTTACAGAACTTTATTTACGGTGCAGAGAACTATCAACTGCAACCGAAGAAATGTTTTGTTGCCAGCAGCAATGTCCAAGGATGTTAGACTGTGGTCACAGGTGTAAAAAAATATGTCACCCAGATCAGTGTAAAGAAAACCAAATTTGTTTGAAAAAGACAAAAGTGCACTGCAATTGTGGCAATTTGAAAAAAGAAGCACCATGCAATGCAGTGCGACAACAAGAAATAAAGATTGATTGTGACAACAGTTGTGAGGCTAAACAAAGAGCAGCAAAGCTAGAGAAGGAAAGAGAAGAAAGGAGGTTGAAAGAGCTAGAAGAAGAAAGAAACCGTAGAGAGTTGGCAGAATACGAGTGGAAGTTGAGTGgcaaaaaaaagaagtataaggAAAAGAAAATGGCCATTAATAGAGATGAAAAAAATTGGCTTCAAAAGTATGGAGTTATTATTACGTCTATACTGGCTTTATTGATTGCATTTGTGTactatttattgtacatttaa
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKEFSSSDDEEPFETSLLDGVLQSYWRGGGDTQMLNRTKNLLEEAISGRNITCLICIGSIKRAHAIWNCDYCYSYFHLSCIQKWANDCVSLKSDDTQGPIAVFVPRKIEWCCPKCRHSYSKDEIPRKYRCFCGKTDNPPLHPWLIPHSCGEICEKRLSSGNHCKHKCLLLCHPGPCPPCPQMVNGVCYCEKEHKKVRCSTGRWSCGQQCKQILPCKSHKCENVCHDGDCPPCSYTSLQPCQCGAEKVRRPCNDLEWQCNKKCNKPFSCGYHKCENICHSGNCGLCPNSGLMSCPCGANQRYVQCPDMMETCLSTCGKKHENCEHNCPEKCHKGPCPPCQVLIEKKCQCSTHTRSLPCSKEFKCDTKCRGTRPCGKHACGRRCCNGNCPPCEKICDKPLQCGRHKCTSVCHHGPCYPCSRESKITCRCKETYVTVPCGREKNIKPPKCSLPCKIKYKCGHIEENKHSCHFGECPPCKAICFKTYQKCGHQCKATCHEYVTLVFKQVKKPATPWEIQPPKSKIMTLDCPPCEMPVLVTCFGEHETEQQPCHSASRRPCGRECGRPLECGNHSCILLCHLFTYNPDYPNVPYKCKQCDNECLAVRPEKCTHKCAKRGCHPGPCPPCEIFERIRCHCGVTELYLRCRELSTATEEMFCCQQQCPRMLDCGHRCKKICHPDQCKENQICLKKTKVHCNCGNLKKEAPCNAVRQQEIKIDCDNSCEAKQRAAKLEKEREERRLKELEEERNRRELAEYEWKLSGKKKKYKEKKMAINRDEKNWLQKYGVIITSILALLIAFVYYLLYI