Timp009399.1
Basic Information
- Insect
- Teinopalpus imperialis
- Gene Symbol
- nfxl1
- Assembly
- GCA_029286865.1
- Location
- JAGSMU010000015.1:11830851-11833325[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1 3.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.0072 2.4e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 20 1.6e-07 0.0051 17.6 15.9 3 19 186 202 185 202 0.95 4 20 4.3e-08 0.0014 19.4 16.6 3 19 239 255 227 255 0.91 5 20 0.71 2.4e+04 -3.6 2.1 6 10 280 284 279 284 0.88 6 20 1.2e-09 3.8e-05 24.4 11.6 1 19 290 308 290 308 0.98 7 20 1.2e-05 0.4 11.6 19.5 3 19 345 361 337 361 0.86 8 20 0.95 3.1e+04 -4.0 0.9 5 10 384 389 384 389 0.89 9 20 4.9e-07 0.016 16.1 19.2 1 18 395 412 395 413 0.97 10 20 1.8e-09 5.8e-05 23.9 17.1 1 19 422 440 422 440 0.99 11 20 3.1e-05 1 10.3 6.4 8 19 487 498 486 498 0.89 12 20 0.0011 37 5.3 8.8 1 12 508 518 508 518 0.97 13 20 0.16 5.1e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 20 0.12 3.8e+03 -1.1 0.1 8 12 568 572 567 573 0.82 15 20 0.00031 10 7.1 2.5 1 11 588 598 588 599 0.97 16 20 0.38 1.2e+04 -2.8 1.6 15 18 613 616 612 617 0.83 17 20 0.00015 4.9 8.1 16.9 3 18 629 645 628 646 0.83 18 20 0.71 2.3e+04 -3.6 0.9 5 10 663 668 663 668 0.91 19 20 1 3.3e+04 -5.0 2.1 6 10 677 681 676 681 0.81 20 20 4.3e-05 1.4 9.8 10.3 1 15 687 700 687 706 0.92
Sequence Information
- Coding Sequence
- ATGGCTCGAAGATACCGCGACGCTGCTGCAAAATTGCAGCAAAATGTACAAAAGCATTTAAAGGAAATGAAAGATCTTTCGTCTTCAGAGGATGAAGAACCTTTCGAACCCAGCGTACTGGACGGCGTTTTCCAGAGTTACTGCAGAGGTGGAGGTGACACACAATTACTAAATAGAACTAGAAATTTACTAGAAGAAGCGATAAGCGGTCGAAACGTAACCTGTCTTATTTGCATAGGCTCTATAAAAAGGGTCCAAGCTATATGGAGTTGCGAGCATTGTTATTCGTATTTTCATCTTCCGTGTATACAAAAATGGGCGAATGACTGTGTGAGCCTTAAAAGTGATGACAATCGTGGACCTATtgcagtttttttaccaaagaaAGTTGAATGGTGCTGTCCAAAATGTCGCCATGCATACAGCAAGGATGAAATCCCACGTAAATACCGTTGTTTTTGTACCAAAACCGACGATCCTCCATTTCACCCTTGGTTAATACCACACACATGTGGAGAGGTATGTGAAAAAAGACTTTCAATAGGAAATAATTGTAAACATAAATGCCTTTTGCTTTGCCACCCTGGGCCTTGTCCACCTTGTCCACAAACAGTTAATGAAGCTTGCTATTGTGAGAAGGAGCGTAAAAGAATCAGATGTAGTGCTGGAAAATGGTCATGTGGATTACAGTGTAAGAAGACCCTGCCATGTAAATCTCACAAATGTGAAAGTATTTGTCACGAAGGTGACTGCCCTCCATGCAGTTACACAAGCATACAACCATGTCAATGTGGAGCTCAAAAGATAAAACGTCCATGTAATGATCTAGAATGGCAATGTCAGAGAAAGTGTAACCAGCCATTCACATGTGGCTACCACAAATGTGAAGAAGTCTGTCATGCAGGGAGCTGTGGTTTGTGCCCTAATTCAGGTTTAATGTCATGTCCGTGTGGAGCGAATCAGGTTTATGTGCAATGCCCGGACATGATAGAAACATGTTTAGGAACATGTGGTAAGAAACATGAAAATTGTGAACATAACTGCCCAGAAAAATGCCATAAAGGCACTTGCCCACCCTGTCAGGTAATGGtagaaaaaatatgtcaatgttCAACACACACAAAGTCTCTACCATGCAGTAAAGAGTTCAAATGTGATTCAAAATGCAGAGGAACTCGGCCCTGTGGCAAGCATACATGTGGACGTAAGTGTTGCAATGGTAATTGTCCACCATGTGAAAAGGTCTGTGATAAACCGTTGCAGTGTGGCCGTCACAAATGCACTTCAGTTTGTCACCATGGCCCTTGTTATCCATGTCCACGAGAGTCAAAAATTACTTGCAGATGCAAAGAAACATATGTAACAGTACCATGTGGGAGAGAAAAGAACATAAAGCCACCAAAATGTAGTCTACCTTGCAAGATCAAATATAAATGTGGCCACTTTGATGAAAATCAACATACATGTCATTTCGGTGACTGTCCACCTTGTAAAGCTACCTGCTTCAAGTCACACGAGAAATGTGGACATCAATGTAAGGCAACCTGTCACAAATATGTGACAGTTGTATTCAAGCAGGTAGAGAAACCTGCCACACCATGGGAGATCCAACCTCCGAAATCTAAAATAATGACTTTAGACTGTCCACCATGTGAAATGCCCATCTCGGTTGCTTGTTATGGTGAGCATGAAATAGAAGATCAACCTTGTCACTCAGCCACCCGTAGACCATGTGGCAGAGAATGTGACCGACCACTTGCATGCACAAATCATTCTTGTGCACTTCTTTGCCATTTTTATAGCCACAATCCTGATTACCCAAATGTGCCTTATTCTTGCAAACCTTGTGATAAAGAATGTATGGTAGTCCGTCCAGAAAAATGCACTCATAAATGTTCTAAGCGCGGTTGTCACCCTGGGCCTTGTCCCCCATGTGATGTTTTAGAGAGAATCCGCTGCCATTGTGGTATTacagaattatatttaagatgcaGAGAACTTTGTAAGGCTACTGAAGAAAAACTCAGTTGTCAGCAACAATGTCCCAAGATGTTGGAATGCGGTCACAGATGTAAGAAACTTTGCCATCCAAACCAATGTAATGAAAACCAAATTTGCTTGAAAAAGACCAAAGTCCAGTGCATCTGTGGCAACCTGAAAAAAGAAGCTCCATGTAAAGCTGTCCAAcaacaagaaataaaagttatttgtgaTAAAAGTTGTGAAGCTAAACAGATAGCAGCTAAGATAGAAAGAGAGAGGGAAGAAAAGAGGCTAAAGGAGTTGGAAGAAGAAAGAAACCGAAAAGAATTAGCAGAGTATGAGTGGAAGTTGAGTggcaaaaagaaaaagtataaagaaaagaaagttgCAATTAATAGAGATGAAAGGAATTGGTTTCAGAAATATTGGATTATAATTCtatcaacaataattttaatgacagcatttttatattatgttctaTACATATGA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKDLSSSEDEEPFEPSVLDGVFQSYCRGGGDTQLLNRTRNLLEEAISGRNVTCLICIGSIKRVQAIWSCEHCYSYFHLPCIQKWANDCVSLKSDDNRGPIAVFLPKKVEWCCPKCRHAYSKDEIPRKYRCFCTKTDDPPFHPWLIPHTCGEVCEKRLSIGNNCKHKCLLLCHPGPCPPCPQTVNEACYCEKERKRIRCSAGKWSCGLQCKKTLPCKSHKCESICHEGDCPPCSYTSIQPCQCGAQKIKRPCNDLEWQCQRKCNQPFTCGYHKCEEVCHAGSCGLCPNSGLMSCPCGANQVYVQCPDMIETCLGTCGKKHENCEHNCPEKCHKGTCPPCQVMVEKICQCSTHTKSLPCSKEFKCDSKCRGTRPCGKHTCGRKCCNGNCPPCEKVCDKPLQCGRHKCTSVCHHGPCYPCPRESKITCRCKETYVTVPCGREKNIKPPKCSLPCKIKYKCGHFDENQHTCHFGDCPPCKATCFKSHEKCGHQCKATCHKYVTVVFKQVEKPATPWEIQPPKSKIMTLDCPPCEMPISVACYGEHEIEDQPCHSATRRPCGRECDRPLACTNHSCALLCHFYSHNPDYPNVPYSCKPCDKECMVVRPEKCTHKCSKRGCHPGPCPPCDVLERIRCHCGITELYLRCRELCKATEEKLSCQQQCPKMLECGHRCKKLCHPNQCNENQICLKKTKVQCICGNLKKEAPCKAVQQQEIKVICDKSCEAKQIAAKIEREREEKRLKELEEERNRKELAEYEWKLSGKKKKYKEKKVAINRDERNWFQKYWIIILSTIILMTAFLYYVLYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154710;
- 90% Identity
- -
- 80% Identity
- -