Psmi075572.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Parnassius smintheus
Gene Symbol
nfxl1
Assembly
GCA_036936625.1
Location
JAUPFT010000028.1:40042138-40044612[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 9.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.13 5.7e+03 -0.3 0.4 4 10 169 175 168 175 0.95
3 17 3.1e-07 0.014 17.6 15.9 3 19 186 202 185 202 0.95
4 17 8.3e-08 0.0038 19.5 16.9 3 19 239 255 227 255 0.91
5 17 4.4e-09 0.0002 23.5 11.9 1 19 290 308 290 308 0.98
6 17 2.9e-06 0.13 14.6 20.2 3 19 345 361 332 361 0.88
7 17 1.1e-05 0.5 12.7 18.0 1 18 395 412 395 413 0.97
8 17 2.9e-09 0.00013 24.1 15.8 1 19 422 440 422 440 0.98
9 17 0.00037 17 7.8 6.6 9 19 488 498 486 498 0.89
10 17 0.0021 96 5.4 8.7 1 12 508 518 508 518 0.96
11 17 0.31 1.4e+04 -1.5 3.5 14 18 547 551 547 552 0.87
12 17 0.099 4.5e+03 0.1 0.5 7 12 567 572 567 579 0.83
13 17 0.00016 7.4 9.0 2.8 1 11 588 598 588 599 0.97
14 17 0.69 3.2e+04 -2.6 1.4 15 18 613 616 612 617 0.83
15 17 0.00037 17 7.8 16.9 3 18 629 645 628 646 0.82
16 17 0.61 2.8e+04 -2.5 1.6 10 16 676 682 674 683 0.79
17 17 0.0001 4.8 9.6 10.7 1 16 687 701 687 706 0.93

Sequence Information

Coding Sequence
ATGGCACGTAGATATCGCGACGCTGCTGCTAAATTGCAGCAAAATGTACAAAAGCATTTAAAGGAAATGAAGGAATTTTCATCGTCTGATGATGAGGAACCCTTTGAAACTAGCTTACTAGATGGTGTATTACAAAGCTATTGGAGAGGTGGAGGCGACACACAAATGCTTAATAGAACAAAAAATTTATTAGAAGAAGTGATTAGCGGTCGAAATATCACTTGTCTTATTTGCATAGGGTCTATTAAACGAGCTCACGCCATATGGAATTGTGACTATTGCTACTCTTATTTTCACCTGTCTTGCATACAAAAGTGGGCAAACGACTGCGTGAGTCTCAAAAGCGATGATACTCGAGGACCAATTGCTGTTTTTGTTCCAAGAAAAATTGAATGGTGTTGCCCAAAATGTAGACATTCATACAGCAAAGAAGAAATTCCGCGTAAATACCGATGTTTCTGTGGTAAAACTGACAATCCACCCCTTCACCCCTGGCTGATACCACATTCCTGTGGTGAAATTTGTGAAAAAAGACTTTCATCGGGGAAACATTGTAAACATAAGTGCCTTCTGCTCTGCCACCCTGGGCCTTGCCCTCCATGTCCACAAATGGTTAATGGAGTTTGCTATTGTGAGAAAGAACGTAAAAAAGTAAGATGTAGTACTGGAAGATGGTCTTGTGGACAACAATGTAAGCAAATACTTCCGTGCAAATCACACAAGTGTGAGAATGTATGCCATGATGGTGATTGTCCTCCATGCAGTTATACGAGCTTACAAGCATGTCGGTGTGGGACTGAAAAAGTAAGACGTCCATGCAATGATTTAGAATGGCAGTGTAATAAGAAATGTAACAAACCATTTTCATGTGGATACCACAAATGTGAAAATATATGCCATTCTGGCAACTGTGGATTATGTCCGAATTCCGGTTTAATGTCCTGTCCATGTGGGGCAAATCAACGTTATGTACTATGTCCAGATGTGATGGAAACATGTTTAAGTACTTGTGGTAAGAAACATGAAAACTGTGAACATAACTGCCCAGAAAAATGCCATAAAGGTCCATGTCCTCCTTGCCAGGTTCTAATTGAGAAGAAATGCCAATGCTCAACGCACACTAGATCACTACCTTGCAGTAAAGAATTCAAGTGTGACACAAAGTGCAGGGGCACTCGCCCCTGTGGTAAACATGCATGTGGACGTAGGTGTTGCAATGGTAACTGTCCGCCATGTGAAAAAATTTGTGATAAGCCATTACAGTGTGGCCGTCACAAATGCACCTCAGTTTGTCATCATGGTCCTTGTTACCCTTGTTCTAGGGAATCGAAAATAACCTGTAGATGTAAAGAAACATATGTCACTGTGCCTTGTGGcagagaaaaaaatataaaaccacCAAAATGCAGTCTCCCTTGTAAGATTAAATATAAATGTGGCCATATAGAGGAAAACAAACATTCATGCCACTTCGGTGAATGTCCACCTTGTAAAGCAATATGCTTCAAGACCTACCAAAAGTGTGGTCATCAGTGTAAAGCTACATGCCACGAATATGTAACACTTGTATTTAAGCAAGTTGAAAAACCTGCAACACCATGGGAAATACAGCCTCCTAAGTCTAAAATAATGACATTAGATTGTCCTCCATGTGAGATGCCTGTGCCAGTAACTTGTTTTGGTGAACATGAGACAGAACAACAACCATGTCATTCCGCATCTAGACGACCATGTGGCCGAGAATGTGGTCGTCCTCTTGAATGCAGTAATCATTCTTGTATACTTCTCTGCCATTTATTTACTTACAATCCTAATTATCCTAATGTGCCTTATAAATGTAAACCATGTGATAACGAATGTTTGGCAGTCCGTCCAGAAAAATGCACTCATAAATGTGCAAAACGTGGTTGTCACCCTGGACCATGTCCTCCATGTGAAATATTTGAGCGCATCCGCTGTCATTGTGGTGTTACAGAACTTTATTTACGGTGTAGAGAACTATCAACTGCAACCGAAGAAATGTTTTGTTGCCAGCAGCAATGCCCAAAGATGTTAGACTGTGGTCACAGGTGTAAAAAAATATGTCACCCAGATCAGTGTAAAGAAAACCAAATTTGTTTGAAAAAGACAAAAGTGCACTGCAATTGTGGCAATTTGAAAAAAGAAGCACCATGCAATGCAGTGCGACAACAAGAAATAAAGATTGATTGTGACAACAGTTGTGAGGCTAAACAAAGAGCAGCAAAGCTAGAGAAGGAAAGAGAAGAAAGGAGGTTGAAAGAGCTAGAAGAAGAAAGAAACCGTAGAGAGTTGGCGGAATACGAGTGGAAGTTGAGTGgcaaaaaaaagaagtataaggAAAAGAAAATGGCCATTAATAGAGATGAAAAAAATTGGCTTCAAAAGTATGGGGTTATTGTTACATCTATACTGGCTTTATTGATTGCATTTGTGTactatttattgtacatttaa
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKEFSSSDDEEPFETSLLDGVLQSYWRGGGDTQMLNRTKNLLEEVISGRNITCLICIGSIKRAHAIWNCDYCYSYFHLSCIQKWANDCVSLKSDDTRGPIAVFVPRKIEWCCPKCRHSYSKEEIPRKYRCFCGKTDNPPLHPWLIPHSCGEICEKRLSSGKHCKHKCLLLCHPGPCPPCPQMVNGVCYCEKERKKVRCSTGRWSCGQQCKQILPCKSHKCENVCHDGDCPPCSYTSLQACRCGTEKVRRPCNDLEWQCNKKCNKPFSCGYHKCENICHSGNCGLCPNSGLMSCPCGANQRYVLCPDVMETCLSTCGKKHENCEHNCPEKCHKGPCPPCQVLIEKKCQCSTHTRSLPCSKEFKCDTKCRGTRPCGKHACGRRCCNGNCPPCEKICDKPLQCGRHKCTSVCHHGPCYPCSRESKITCRCKETYVTVPCGREKNIKPPKCSLPCKIKYKCGHIEENKHSCHFGECPPCKAICFKTYQKCGHQCKATCHEYVTLVFKQVEKPATPWEIQPPKSKIMTLDCPPCEMPVPVTCFGEHETEQQPCHSASRRPCGRECGRPLECSNHSCILLCHLFTYNPNYPNVPYKCKPCDNECLAVRPEKCTHKCAKRGCHPGPCPPCEIFERIRCHCGVTELYLRCRELSTATEEMFCCQQQCPKMLDCGHRCKKICHPDQCKENQICLKKTKVHCNCGNLKKEAPCNAVRQQEIKIDCDNSCEAKQRAAKLEKEREERRLKELEEERNRRELAEYEWKLSGKKKKYKEKKMAINRDEKNWLQKYGVIVTSILALLIAFVYYLLYI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01154710;
90% Identity
iTF_01155975; iTF_01157357; iTF_01158414; iTF_01154710;
80% Identity
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