Ppol005278.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Papilio polyxenes
Gene Symbol
nfxl1
Assembly
GCA_026167825.1
Location
JAOPJD010000019.1:4135912-4138386[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 6 2.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 16 0.16 6.6e+02 1.0 0.2 4 10 169 175 168 176 0.96
3 16 9.3e-07 0.0039 17.6 15.9 3 19 186 202 185 202 0.95
4 16 9.5e-07 0.004 17.6 17.0 3 19 239 255 227 255 0.91
5 16 3.4e-09 1.4e-05 25.4 12.5 1 19 290 308 290 308 0.99
6 16 4.4e-06 0.018 15.5 18.9 3 18 345 360 337 361 0.86
7 16 0.0002 0.84 10.2 20.3 1 18 395 412 395 413 0.97
8 16 5.9e-10 2.5e-06 27.9 14.2 1 19 422 440 422 440 0.99
9 16 0.00087 3.7 8.1 8.0 9 19 488 498 486 498 0.92
10 16 0.0019 7.8 7.1 7.9 1 12 508 518 508 518 0.97
11 16 1.1 4.7e+03 -1.8 3.3 14 18 547 551 547 552 0.85
12 16 1.3 5.5e+03 -2.0 1.7 8 12 568 572 567 582 0.79
13 16 0.017 73 4.0 4.3 3 11 590 598 578 599 0.78
14 16 2.3 9.5e+03 -2.8 1.6 15 18 613 616 612 617 0.83
15 16 0.02 84 3.8 17.5 4 18 630 645 628 646 0.79
16 16 0.00029 1.2 9.7 9.9 1 15 687 700 687 706 0.91

Sequence Information

Coding Sequence
ATGGCTCGAAGATATCGCGACGCCGCTGCAAAACTGCAGCAAAATGTTCAAAAACATTTACAAGAAATGCAGGATAACTTATCATCTGAAGATGAAGAGCCCTTTGAAGTTAGCGTACTTGACGGTGTGTTCCAGAGCTACTCGAGAGGTGGAGGTGATACAAAATTGCTCAATCGGACCAAGAATTTACTAGAAGAAGCTATTAGCGGTAGAAATATAACCTGTCTTATATGTATAGGTTCGATTAAAAGAGTCCATGCTATTTGGAATTGCGACAACTGCTATTCATATTTTCACTTATCCTGCATACAGAAGTGGGCAAATGACTGTGTGAGCCTTAAAAGCGATGATAATCATGGTCCTATTACTGTATTTGTACCAAAGAAAGTTGAATGGTGCTGTCCAAAATGTCGGCAGGCTTACACCAAGGAACAAATACCACATAAATATCGTTGTTTCTGTAGTAAAACTGATAATCCACCAATCCATCCCTGGTTAATACCACATTCTTGTGGCGAAGTTTGTGGGAAAAGACTTTCTAGTGGTAACAACTGTAAACACAAGTGCCTATTACTATGCCATCCAGGCCCTTGCCCGCCTTGCCCCCAGATGGTTAATGATTCATGTTATTGTCAAAAAGAACATAAAAAAGTAAGATGTAGTGCTGGAAAATGGTCTTGTGGTAGTCAATGTAAGAAAACACTGCCATGTAAATCTCATAAGTGTGAAAACATTTGCCACGATGGTGAATGTCCTCCATGCAGTTACACAAGTATACAAGCATGTCAATGTGGAAGTGAGAAGATTAAACGTCCATGCAATGATCTAGAATGGCAATGTATTAAGATATGTAACAAACCATTTTCTTGTGGTTACCACAAATGTGACAGGGTATGCCATTCAGGTAGTTGTGGTTCATGTCCCAATTCTGGACTAAAGGCTTGCCCATGTGGTGCAAATCAGCAATTTGTTCAGTGCCCAGATGTAATGGAAACATGTTTAGGAACTTGTGGCAAAAAACATAATGATTGTGAGCATAATTGCCCTGAGAAATGTCATAAAGGCCCATGTCCACCTTGCCTAGTCATGATAGAGAAAACTTGTCAATGCTCCGCACACATTAGATCACTGCCATGCAGTAAAGAGTTCAAATGTGACACAAAATGCAGGGGAACCAGACCATGTGGGAAACATGGTTGTGGCCGTAAATGTTGTAATGGAAACTGTCCTCCGTGTGAAAAGCTTTGTGACAAACCCCTGCAGTGTGGCCGACACAAATGTACATCAGTATGTCATCGTGGCCCATGCTACCCCTGTCCTAGAGAGTCAAAAATCACTTGCAGATGCAAAGAAACCTATATTACAGTTCCTTGTGGCCGAGAAAAGAATATAAAGCCACCAAAATGTAATCTACCCTGTAAGATTAAATATAAATGTGGTCATTCCGATGATAATCACCATTTATGCCACTTTGGTGACTGCCCTCCTTGTAAGGCAATATGTTTCAAGACATACGAAAAATGTGGACACCAATGTAAAGCTGTCTGTCATAAATTTGTAACTGTAGTATTTAAGCAGGTAGAAAAACCTGCCACTCCATGGGAAATACAACCACCAAAGTCTAAAATAATGACATTAGAATGCCCACCATGTGAGGAACCTGTAGCGATTGCTTGTTTCGGTGAGCATGAGGTTACAAACCAGCCATGTCACTCTGCATCTAGAAAACCATGCGGGAGAGAATGTGGCCGTCTTTTAAAGTGCCTAAACCACTCATGTTTGGAAATGTGTCATTTATACAGCTATAATTCTGATTACCCAAATGTGCCTTACTCTTGCAAGCCATGTGATAAAGAATGTTTAGTGGACCGTCCAGAAAAATGTACTCATAAATGTGCTATAGGCCATTGTCATCCTGGGCCTTGCCCACCTTGTGATATAATGGAAAGAATCCGTTGTCATTGTGGTGTAACTGATCTATATTTCAGATGTAAAAAGTTGTCATCATGTACTGAAGATATGCTAAGCTGTGGTCAGCAGTGCCCAAAGATGTTGCAATGTGGTCATAGATGTAAGAAAGTTTGCCATTCAAATAAGTGTAGTGAAAACCAAATATGTTTGAAGAAAACTAAAGTCCACTGTGCTTGTGGCAATTTGAAGAAGGAAGCTCCCTGCAATGCGGTAAAAGAAAAGGAGGTTAAAGTTGTTTGTGATAAGAGTTGTGAAGAAAAACAGGCTGCAGCCAAGAAAGAGAAAGAAAGGGAAGAAAAGAGACTAAAAGAGTTGGAGGAGGAAAGAAACCGAAAAGAGTTAGCTGAGTATGAGTGGAAATTGAGCGGCAAAAAGAAGAAATACAAGGAAAAGAAGATTGTTATTAATAAAGATGAGAGAAATTGGCTTCAGAAATATTGGATAATAATTTTATCTGTAATATTTTTGGTCATATCATTTTTATATTACATTTTATATGTGTAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLQEMQDNLSSEDEEPFEVSVLDGVFQSYSRGGGDTKLLNRTKNLLEEAISGRNITCLICIGSIKRVHAIWNCDNCYSYFHLSCIQKWANDCVSLKSDDNHGPITVFVPKKVEWCCPKCRQAYTKEQIPHKYRCFCSKTDNPPIHPWLIPHSCGEVCGKRLSSGNNCKHKCLLLCHPGPCPPCPQMVNDSCYCQKEHKKVRCSAGKWSCGSQCKKTLPCKSHKCENICHDGECPPCSYTSIQACQCGSEKIKRPCNDLEWQCIKICNKPFSCGYHKCDRVCHSGSCGSCPNSGLKACPCGANQQFVQCPDVMETCLGTCGKKHNDCEHNCPEKCHKGPCPPCLVMIEKTCQCSAHIRSLPCSKEFKCDTKCRGTRPCGKHGCGRKCCNGNCPPCEKLCDKPLQCGRHKCTSVCHRGPCYPCPRESKITCRCKETYITVPCGREKNIKPPKCNLPCKIKYKCGHSDDNHHLCHFGDCPPCKAICFKTYEKCGHQCKAVCHKFVTVVFKQVEKPATPWEIQPPKSKIMTLECPPCEEPVAIACFGEHEVTNQPCHSASRKPCGRECGRLLKCLNHSCLEMCHLYSYNSDYPNVPYSCKPCDKECLVDRPEKCTHKCAIGHCHPGPCPPCDIMERIRCHCGVTDLYFRCKKLSSCTEDMLSCGQQCPKMLQCGHRCKKVCHSNKCSENQICLKKTKVHCACGNLKKEAPCNAVKEKEVKVVCDKSCEEKQAAAKKEKEREEKRLKELEEERNRKELAEYEWKLSGKKKKYKEKKIVINKDERNWLQKYWIIILSVIFLVISFLYYILYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01154710;
90% Identity
iTF_01142813;
80% Identity
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