Pant014395.1
Basic Information
- Insect
- Pharmacophagus antenor
- Gene Symbol
- nfxl1
- Assembly
- GCA_018245475.1
- Location
- DWQX01006296.1:5755-8229[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3 5.7e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.097 1.8e+03 0.7 0.4 4 10 169 175 168 175 0.96 3 20 4.7e-07 0.0088 17.6 15.9 3 19 186 202 185 202 0.95 4 20 0.00022 4.2 9.1 17.2 3 19 239 255 227 255 0.91 5 20 2 3.8e+04 -3.6 1.2 6 10 280 284 279 284 0.91 6 20 4.1e-09 7.7e-05 24.2 14.7 1 19 290 308 290 308 0.99 7 20 1.5e-06 0.028 16.0 17.1 3 19 345 361 344 361 0.93 8 20 2.8 5.4e+04 -4.0 0.9 5 10 384 389 384 389 0.89 9 20 8e-06 0.15 13.7 18.3 1 18 395 412 395 413 0.97 10 20 8.6e-09 0.00016 23.2 16.8 1 19 422 440 422 440 0.99 11 20 0.0001 2 10.1 6.2 7 19 486 498 486 498 0.89 12 20 0.0023 43 5.9 7.6 3 12 509 518 508 518 0.92 13 20 0.47 8.8e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 20 0.39 7.4e+03 -1.3 0.1 8 11 568 571 567 574 0.82 15 20 0.00084 16 7.2 5.4 1 11 588 598 582 599 0.92 16 20 1.1 2.1e+04 -2.8 1.6 15 18 613 616 612 617 0.83 17 20 0.00041 7.7 8.2 16.4 3 18 629 645 628 646 0.82 18 20 0.36 6.8e+03 -1.2 2.1 9 16 675 682 673 683 0.83 19 20 3.9e-05 0.74 11.5 8.8 1 16 687 701 687 707 0.90 20 20 2.9 5.4e+04 -4.0 1.0 5 10 736 741 736 742 0.84
Sequence Information
- Coding Sequence
- ATGGCCCGACGTTATCGTGACGCCGCTGCAAAATTGCAGCAAAATGTCCAAAAACATTTGCAGGAAATGAAAGACCTGTCTTCATCAGAGGACGAGGAACCGTTTGAAACAAACGTACTGGACGGAGTTTTTCAAAGTTACTGGAGAGGCGGTGGTGATTCACAATTGCTAAACAGAACAAAAAATCTTCTAGAAGAAGCTATAAGTGGTCGGAACATAACCTGTCTCATATGTATAAGTTCAATTAAACGTGTTCACGCTATTTGGAATTGCGACCACTGTTActcatattttcatatttcctgCATACAAAAGTGGGCAAACGACTGTGTAAGTCTCAAAAGTGATGACAATCATGGCCCTATTGCGGTTTTCGtaccaaaaaaaattgaatggtGTTGTCCCAAATGTCGGCATTCGTACAGCAAAGAGGAGATACCGCGTAAATATCGTTGTTTTTGCGGCAAAACCGATAATCCTCCATTTCATCCCTGGCTAATACCACATTCGTGTGGCGAAGTTTGTGCAAAAAAACTTTCGAAGGGCAATAATTGTAAACATAAGTGTCTTTTGCTCTGTCACCCTGGACCATGCCCACCTTGTCCACAGACTGTTAATGAAGTATGCTACTGTGAAAAGGAACATAAGAGGGTTAGATGTAGTGCAGGAAAATGGTCCTGTGGGCaacaatgtaaaaaaacttTGCCATGTAAAACTCACAAATGTGAAAGTATTTGTCATGAAGAAAGTTGTCCACCGTGTAGTTATACAAGCTTACAGCCATGTCAATGTGGTATGGAAAAAGTAAAACGACCATGCAACAACCTTAACTGGCATTGtgagaaaaaatgtaatagatcATTCTCATGTGGCTACCATAAATGTGGGAGAATTTGTCATTCGGGTGATTGTGGCCCATGTCCCAATTCTGGTTTAATGTCATGCCCATGTGGTGCTAATCAGCGTTATCTACAATGTCCCGATGTTATGGAAACTTGTCTGGGAACATGCAGCAAAAAACGAGAGGATTGTGAGCATTATTGCCCTGAAAAATGCCACAAGGGACCATGTCCTCCTTGTCAAGTTGTAGTGGAAAAGATTTGTCAGTGTTCAACACACACTAAGGCTCTTCCATGCAGTAAAGAATTTAAATGTGATTCAAAATGCAGGGGCACTCGACCATGTGGAAAACATGCATGTGGACGAAAATGCTGCAACGGTAACTGTCCGCCATGTGAAAAAGTCTGTGACAAACTATTACAATGTGGCAGACATAAATGCACTTCAATTTGTCATCATGGACCATGCTACCCATGCCCGCGAGAGTCTAAAATAACTTGCAGATGCAAAGAAACATATGTCACAGTACCCTGTGGAAGAGAGAAAAATATGAGACCTCCTAAATGCAGCCTACcctgcaaaattaaatataaatgtggtCATGTGGATGAAAACCAACATTTATGCCATTTCGGAGAATGTCCACCTTGCAAGGCTATATGTTTCAAGACTTACGAGAAGTGTAATCACAAGTGCAAGGCTGTCTGCCACAAATTTGTAACAGTTGTGTTCAAACAAGTTGAGAAACCTGCCACACCATGGGAGATACAACCACCAAAATCAAAAGTAATGACTTTGGATTGTCCTCCGTGTGAGGAACCAGTTCCTGTCGCTTGTTTCGGTGAACATGAAGTGGACAACCAACCTTGTCATGCAGCGGCTCAAAGACCATGTGGTAGACAATGCGGCCGGCCACTTGAATGTACAAATCATACATGCTCACTGCTCTGCCATTTTTACAACTACAATCCTAATCATCCAAATGTGCCTTATTCATGCAAACCTTGTGATAAAGAATGTTTGGTAATCCGTCCAGAGAAGTGCACTCATAAATGTGCAAAGAGGGGCTGTCACCCTGGACCTTGTCCACCGTGTGATATTCTAGAAAGAGTTCGCTGCTATTGTGGTGTCACAGAACTTTATATAAGATGTAAAGAGCTTATAAAGGCAACAGAACAAATGCTTTGTTGTCAGCAACAGTGTCCAAAAATGTTGGAATGTGGCCACAGATGTAAGAAACTTTGTCACTCAAATCAATGTAAAGATAGCCAAATATGCTTGAAGAAAACCAAAGTTTATTGTCCTTGTGGTAACTTGAAAAGAGAAGCACCATGTAATGCGGTTAAAGaacaagaaataaaagttacttGTGATAAAAGCTGTCAAGAGAAACAAGAGGCAACTAGGATCGAGAAAGATAGAGAACAAAAGAGGTTAAAAGAATTGGAGGAAGAAAGAAACCGCAAGGAGTTAGCTGAATATGAGTGGAAGTTAAGTGGCAAAAAGAGAAAGTATAAGGAAAAGAGAGTAGTAATTGATAAGGCAGATAAGAATTGGCTTCAAAAATATTGGTTAATAATATTGTCAATAATATTCCTTATGACAGCAATTTTGTACtatgttttatgtatatga
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQEMKDLSSSEDEEPFETNVLDGVFQSYWRGGGDSQLLNRTKNLLEEAISGRNITCLICISSIKRVHAIWNCDHCYSYFHISCIQKWANDCVSLKSDDNHGPIAVFVPKKIEWCCPKCRHSYSKEEIPRKYRCFCGKTDNPPFHPWLIPHSCGEVCAKKLSKGNNCKHKCLLLCHPGPCPPCPQTVNEVCYCEKEHKRVRCSAGKWSCGQQCKKTLPCKTHKCESICHEESCPPCSYTSLQPCQCGMEKVKRPCNNLNWHCEKKCNRSFSCGYHKCGRICHSGDCGPCPNSGLMSCPCGANQRYLQCPDVMETCLGTCSKKREDCEHYCPEKCHKGPCPPCQVVVEKICQCSTHTKALPCSKEFKCDSKCRGTRPCGKHACGRKCCNGNCPPCEKVCDKLLQCGRHKCTSICHHGPCYPCPRESKITCRCKETYVTVPCGREKNMRPPKCSLPCKIKYKCGHVDENQHLCHFGECPPCKAICFKTYEKCNHKCKAVCHKFVTVVFKQVEKPATPWEIQPPKSKVMTLDCPPCEEPVPVACFGEHEVDNQPCHAAAQRPCGRQCGRPLECTNHTCSLLCHFYNYNPNHPNVPYSCKPCDKECLVIRPEKCTHKCAKRGCHPGPCPPCDILERVRCYCGVTELYIRCKELIKATEQMLCCQQQCPKMLECGHRCKKLCHSNQCKDSQICLKKTKVYCPCGNLKREAPCNAVKEQEIKVTCDKSCQEKQEATRIEKDREQKRLKELEEERNRKELAEYEWKLSGKKRKYKEKRVVIDKADKNWLQKYWLIILSIIFLMTAILYYVLCI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154710;
- 90% Identity
- -
- 80% Identity
- -