Tobl000964.1
Basic Information
- Insect
- Troides oblongomaculatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_029032895.1
- Location
- JARDWC010000067.1:185901-188390[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3 2.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.098 8.5e+02 0.6 0.4 4 10 169 175 168 175 0.96 3 19 4.7e-07 0.0041 17.6 15.9 3 19 186 202 185 202 0.95 4 19 1.2e-06 0.01 16.3 11.5 3 19 239 255 237 255 0.92 5 19 1.5 1.3e+04 -3.1 0.8 6 10 280 284 279 284 0.90 6 19 1.3e-08 0.00011 22.6 12.4 1 19 290 308 290 308 0.98 7 19 9.4e-07 0.0082 16.7 17.0 3 19 345 361 337 361 0.86 8 19 1.5 1.3e+04 -3.2 1.8 5 10 384 389 384 389 0.93 9 19 8.1e-06 0.07 13.7 18.3 1 18 395 412 395 413 0.97 10 19 5.3e-09 4.6e-05 23.9 17.1 1 19 422 440 422 440 0.99 11 19 5.1e-05 0.44 11.1 5.9 7 19 486 498 486 498 0.89 12 19 0.00033 2.9 8.5 7.2 1 12 508 518 508 518 0.97 13 19 0.47 4.1e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 19 1.2 1.1e+04 -2.9 0.2 8 12 568 572 567 572 0.76 15 19 0.0011 9.4 6.9 5.8 1 11 588 598 582 599 0.92 16 19 1.1 9.8e+03 -2.8 1.6 15 18 613 616 612 617 0.83 17 19 3.8e-05 0.33 11.5 13.4 3 18 629 645 628 646 0.84 18 19 0.35 3e+03 -1.1 1.6 9 16 675 682 673 683 0.84 19 19 8.1e-05 0.7 10.5 10.1 1 16 687 701 687 707 0.89
Sequence Information
- Coding Sequence
- ATGGCTAGAAGGTATCGAGACGCCGCTGCAAAATTGCAGCAAAATGTTCAAAAACATTTACAGGAAATGAAAGACCTCTCCTCGTCTGAGGATGAAGAACCGTTTGAAGCTAGCGTACTGGACGGCGTTTTCGAAAGTTACTGGAGGGGTGGAGGAGACACACAATTGCTAAACAGAACAAAAAATCTTCTAGAAGAAGCTATAAGCGGCCGCAACATAACCTGTCTTATATGTATCGGCTCAATTAAACGAGTCCACGCTATTTGGAATTGCGATCATTGTTACTCGTATTTCCATATTTCGTGCATACAAAAGTGGGCCAACGACTGTGTCAGTCTGAAAAGTGATGACAATCATGGGCCTATTGCTATTTTCGTACCCAAGAAAATTGAATGGTGTTGTCCAAAATGTCGACATTCGTACAGCAAAGACGAAATTCCGCGGAAATATCTCTGTTTTTGTGGTAAGACCGATAATCCTCCATTTCATCCCTGGCTAATACCACATTCATGTGGGGAAGTCTGTGAAAAAAGACTTTCAACAGGCAATAATTGTAAACACAAATGCCTTCTACTCTGCCACCCTGGGCCATGTCCACCATGTCCACAGACTATTAATGAACAGTGTTATTGTAAGAAGGAATATAAAAGAGTGCGATGTAGTGCAGGGAAATGGTCTTGTGGACAGCAATGTAAAAAAACATTGCAATGTAGGACACACAAATGTGAAAGTATTTGTCATGAAGCAGATTGTCCACCATGCAGATACACAAGTATACAACCCTGCCAGTGTGGTGCTGAAAAAATAAAACGACCTTGTAATGATGTTGACTGGTATTGTGAGAAAAAATGTGGCCAACCTTTTTCATGTGGCTACCACAAATGTGACAAAACATGTCACTCAGGCGACTGTGGTTTATGTCCGAATTCAGGTTTAATGTCATGCCCATGTGGAGCAAATCAGCGTTATATACAATGTCCTGACACAATGGAGACTTGTTTGGGAACATGTGGCAAGAAAAGAGAGGATTGTGAGCATTATTGCCCTGAGAAATGCCACAAGGGGCCTTGTCCTCCTTGCCAGGTCATGGTGGAGAAGATTTGTCAGTGTTCAACACACACTAAGTCTCTACCATGCTGTAAAGAATTCAAATGTGAATCAAAATGTAGAGGTACACGGCCATGTGGTAAGCATGCTTGTGGTCGTAAATGCTGTAATGGTAACTGTCCTCCATGTGAAAAAGTTTGTGACAAACCTGTACAGTGTGGTAGACATAAATGCACTTCAGTATGTCACCATGGACCATGCTATCCATGTCCACGAGAGTCTAAGATAACATGCAGATGTAAAGAAACTTATGTCACAGTACCATGTGGAAGAGAGAGAAACACTAGAGCACCTAAATGTAGCCTGCCCTGCAAAATAAAGTACAAGTGTGGTCATATGGAGGAAAACCAACACCTGTGTCATTTCGGAGACTGTCCACCTTGCAAAGCTATATGTTTCAAGACATATGAGAAATGTGGTCACAAGTGTAAGGCTATTTGCCACAAATTTGTAACAGTTGTGTTCAAGCAAGTAGAGAAACCGGCAACACCATGGGAGATACAACCTCCTAAGTCTAAAGTAATGACATTAGATTGTCCTCCGTGTGAGGAACCTGTACCCATTGCTTGTTTTGGTGAACATGAAGTTGAAAATCAATCTTGTCACTCAGCAGCTCAAAGACCATGTGGTAGACAATGTGGCCGGCCACTTGGATGCACAAATCATACATGCTCACTGCTCTgccatttttataattataatcctAAACATCCAAATGTGTCTTATTCATGTAAACCTTGTGATAAAGAATGTTTGGTAATCCGTCCAAAAAAGTGTACTCATAAATGTGCAAAGAGAATATGTCACCCTGGTTCTTGTCCTCCATGTGACATTTTAGAAAGAATCCGCTGCCACTGTGGAGTCACTGAACTTTATATAAGATGTAAGGAGCTGATAAACACAACAGAAGAAATCCTCTGTTGTCAGCAGCAGTGTCCTAAAATGTTGGAGTGTGGTCACAGATGTAAGAAACTTTGTCACTCAAACCAATGTAAAGAAAGCCAAAAATGCTTGAAGAAAACTAAAGTGCACTGTGCATGTGGTAACTTGAAGAAGGAAGCTCCATGTAATGTGATAAAAGAGGAAGGAATCAAAGTTATTTGTGATAAAAGCTGTGAAGAAAAGCTAGAGGCAGGTAAGATCgaaaaagaaagagaagaaaaaCGACAAAAAGAATTGGAGGAAGAAAGAAATCGTAAAGAGCTAGCAGAATATGAGTGGAAGTTAAGCggcaaaaagaaaaaatataaggaGAAGAAAGTAGTTATTGATAAGGCTAATGGGAGTTGGCTTCAAAACTATTGGTTAATGATAATATCAGCATTATTTATTGTGGTAGCATTTTTATACTATGTTTTGTGTGTAacagaaacagtagtgtga
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQEMKDLSSSEDEEPFEASVLDGVFESYWRGGGDTQLLNRTKNLLEEAISGRNITCLICIGSIKRVHAIWNCDHCYSYFHISCIQKWANDCVSLKSDDNHGPIAIFVPKKIEWCCPKCRHSYSKDEIPRKYLCFCGKTDNPPFHPWLIPHSCGEVCEKRLSTGNNCKHKCLLLCHPGPCPPCPQTINEQCYCKKEYKRVRCSAGKWSCGQQCKKTLQCRTHKCESICHEADCPPCRYTSIQPCQCGAEKIKRPCNDVDWYCEKKCGQPFSCGYHKCDKTCHSGDCGLCPNSGLMSCPCGANQRYIQCPDTMETCLGTCGKKREDCEHYCPEKCHKGPCPPCQVMVEKICQCSTHTKSLPCCKEFKCESKCRGTRPCGKHACGRKCCNGNCPPCEKVCDKPVQCGRHKCTSVCHHGPCYPCPRESKITCRCKETYVTVPCGRERNTRAPKCSLPCKIKYKCGHMEENQHLCHFGDCPPCKAICFKTYEKCGHKCKAICHKFVTVVFKQVEKPATPWEIQPPKSKVMTLDCPPCEEPVPIACFGEHEVENQSCHSAAQRPCGRQCGRPLGCTNHTCSLLCHFYNYNPKHPNVSYSCKPCDKECLVIRPKKCTHKCAKRICHPGSCPPCDILERIRCHCGVTELYIRCKELINTTEEILCCQQQCPKMLECGHRCKKLCHSNQCKESQKCLKKTKVHCACGNLKKEAPCNVIKEEGIKVICDKSCEEKLEAGKIEKEREEKRQKELEEERNRKELAEYEWKLSGKKKKYKEKKVVIDKANGSWLQNYWLMIISALFIVVAFLYYVLCVTETVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154710;
- 90% Identity
- iTF_01495466;
- 80% Identity
- -