Pgig017688.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Papilio gigon
Gene Symbol
nfxl1
Assembly
GCA_027563995.1
Location
JAODUI010000019.1:2908636-2911122[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 3 2e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.15 1e+03 0.0 0.2 4 10 169 175 168 177 0.94
3 17 4.7e-07 0.0031 17.6 15.9 3 19 186 202 185 202 0.95
4 17 2.4e-07 0.0016 18.6 16.7 3 18 239 254 227 255 0.91
5 17 1.4e-08 9.5e-05 22.5 11.8 1 19 290 308 290 308 0.99
6 17 8e-05 0.53 10.5 19.1 3 19 345 361 337 361 0.86
7 17 0.0001 0.67 10.2 20.3 1 18 395 412 395 413 0.97
8 17 2.9e-10 1.9e-06 27.9 14.2 1 19 422 440 422 440 0.99
9 17 5.1e-05 0.33 11.1 5.9 7 19 486 498 486 498 0.89
10 17 0.02 1.3e+02 2.8 6.8 4 12 510 518 508 518 0.90
11 17 0.56 3.7e+03 -1.8 3.3 14 18 547 551 547 552 0.85
12 17 0.78 5.2e+03 -2.2 1.9 8 12 568 572 567 582 0.79
13 17 0.028 1.8e+02 2.4 4.9 3 11 590 598 578 599 0.79
14 17 1.1 7.5e+03 -2.8 1.6 15 18 613 616 612 617 0.83
15 17 0.051 3.4e+02 1.5 15.3 4 18 630 645 628 646 0.77
16 17 2.1 1.4e+04 -3.6 4.0 9 16 675 682 669 683 0.80
17 17 0.00017 1.1 9.5 8.1 1 15 687 700 687 702 0.88

Sequence Information

Coding Sequence
ATGGCTCGAAGATATCGCGACGCCGCTGCAAAACTGCAGAAAAATGTTCAAAAGCATTTAAAGGAAATGCAGGATAATTTATCCTCTGAAGATGAGGAACCTTTTGAAGTGAGCGTACTGGATGGCGTGTTCCAGAGCTACTCGAGAGGAGGAGGTGATACAAAATTGCTCAACCGTACCAAGAACTTACTAGAAGAAGCCATAAGCGGTCGAAATATAACCTGTCTTATATGCATAGGATCGATTAAAAGAGTCCATGCCATTTGGAATTGTGACAACTGTTATTCATATTTTCATTTATCTTGCATACAAAAATGGGCGAACGACTGTGTGAGCCTCAAGAGCGATGATAATCATGGTCCTATTACAGTATTTGTACCTAAGAAGGTTGAATGGTGCTGTCCAAAATGTCGTCAAGCATACAGCAAAGAACAAATACCACATAAATATCGTTGTTTTTGTAGCAAAACTGATAATCCTCCAATCCATCCCTGGTTAATACCACATTCATGTGGTGAGATTTGTGGTAAAAGATTGTCAACAGGAAACAACTGTAAACATAAATGTCTGCTGCTATGCCATCCAGGTCCTTGCCCACCTTGTCCTCAAATGGTTAGTGATGCATGCTATTGTCAAAAGGAGCATAAAAAAGTAAGATGTAGTGCTGGAAAATGGTCCTGTGGTAGCCAGTGCAAGAAAACACTGCCATGTAAATCTCACAAGTGTGAAAGCATTTGCCATGATGGTGATTGTCCACCGTGCAATTACACAAGTCTACAAGCTTGTCAATGTGGAAGTGAAAAGATGAAGCGTCCTTGTAATGATGTAGAGTGGCAATGCTTTAAGATATGTAACAAACCATTTACATGTGGTTACCATAAATGTAACATTGTATGCCATTCTGGTAGTTGTGGTTCATGTCCTAACTCAGGACTCAAGGCATGCCCATGTGGTGCAAATCAGCAGTTTGTTCAATGTCCTGATGTCATGGATACATGTTTAGGAACTTGTGGAAAGAAACATAGTGATTGCGAGCACGGTTGCCCTGAAAAATGTCATAAAGGCTCATGTCCACCATGCTCAGTTACTATTGATAAAACTTGTCAATGCACTGCACATACTAGATCATTACCTTGTAGTAAAGAGTTCAAATGCGATACAAAGTGCAGAGAAACTAGACCATGTGGTAAACATGGATGTGGACGTAAATGTTGCAATGGCAACTGCCCACCATGCGAAAAGGTTTGTGATAAACCGCTGCAGTGTGGCCGGCATAAATGCACATCAGTGTGTCACCGTGGCCCGTGCTACCCCTGTCCTAGGGAGTCAAAAATAACTTGCAGATGCAAAGAAACGTATATTACAGTTCCTTGTGGCAGAGAAAAAAATATGAAGCCACCAAAATGTACTTTTTCTTGCAAAATTAAATATAAATGTGGTCATTCCGAGGAGAATCAGCATTTATGCCACTTTGGTGATTGCCCACCCTGTAAGGCTGTATGTTACAAGACATATGAGAAATGTGATCACCAATGTAAAGCTGTCTGTCATAAATATGTGACTGTTGTATTTAAGCAGATAGAAAAACCGGCCACACCTTGGGAAATTCAACCTCCTAAGTCTAAAATCATGACATTAGAATGTCCACCGTGTGAGGAACCAGTAGCAGTTGCTTGCTTTGGTGAGCACGAAGTTACGAACCAACCATGTCATTCTGCATCAAAGAAACCATGTGGGAGAGAATGTGGCCGTCTCCTTGAGTGCCTAAACCACTTGTGTTCAGAAATGTGTCATTTATACAAGCATAATTCTGATTACCCAAATGTGCCTTACTCTTGCAAGCCATGTGATAAAGAATGTTTAGTAGACCGTCCAGAAAAATGTACTCATAAATGTGTGATAGGCCACTGTCATCCTGGGCTGTGCCCACCTTGTGATGCAATGGAACGAATCCGTTGTCATTGTGGTGTAAGTGAACTATATATAAGATGTAAAAAATTAACCACATGTACCGAAGAAATGCTTTGCTGTGGTCAACAGTGTCCAAAGATGTTGCAATGTGGTCATAGATGTAAGAAAGTTTGCCATTTGAATAAGTGTAGCGAAAACCAAATATGTTTCAAGAAAACTAAAATTCATTGTGCATGTGGCAATTTGAAGAAAGAAGCGCCATGCAATGCAGTTCAGGAACAAGAAGTAAAAGTTGTTTGTGACAAGAGTTGTGAAGAAAAACAAGCTGCAGCAAAGAAAGAGAAAGAAAAAGAAGAAAAGAGGCTGAAGGAGTTGGAAGAGGAAAGAAACAGAAAGGAGTTAGCTGAATATGAGTGGAAATTGAGTGGAAAAAAGAAGAAATATAAGGAAAAGAAGGTTGTCGTTAACAAAGATGAGAGGAATTGGCTTCAGAAATATTGGATAGTAATTTTATCTTTAATGTTTTTGATCATATCATTTTTGTACTACATTTTATATATAGCACCAATTGTGTAA
Protein Sequence
MARRYRDAAAKLQKNVQKHLKEMQDNLSSEDEEPFEVSVLDGVFQSYSRGGGDTKLLNRTKNLLEEAISGRNITCLICIGSIKRVHAIWNCDNCYSYFHLSCIQKWANDCVSLKSDDNHGPITVFVPKKVEWCCPKCRQAYSKEQIPHKYRCFCSKTDNPPIHPWLIPHSCGEICGKRLSTGNNCKHKCLLLCHPGPCPPCPQMVSDACYCQKEHKKVRCSAGKWSCGSQCKKTLPCKSHKCESICHDGDCPPCNYTSLQACQCGSEKMKRPCNDVEWQCFKICNKPFTCGYHKCNIVCHSGSCGSCPNSGLKACPCGANQQFVQCPDVMDTCLGTCGKKHSDCEHGCPEKCHKGSCPPCSVTIDKTCQCTAHTRSLPCSKEFKCDTKCRETRPCGKHGCGRKCCNGNCPPCEKVCDKPLQCGRHKCTSVCHRGPCYPCPRESKITCRCKETYITVPCGREKNMKPPKCTFSCKIKYKCGHSEENQHLCHFGDCPPCKAVCYKTYEKCDHQCKAVCHKYVTVVFKQIEKPATPWEIQPPKSKIMTLECPPCEEPVAVACFGEHEVTNQPCHSASKKPCGRECGRLLECLNHLCSEMCHLYKHNSDYPNVPYSCKPCDKECLVDRPEKCTHKCVIGHCHPGLCPPCDAMERIRCHCGVSELYIRCKKLTTCTEEMLCCGQQCPKMLQCGHRCKKVCHLNKCSENQICFKKTKIHCACGNLKKEAPCNAVQEQEVKVVCDKSCEEKQAAAKKEKEKEEKRLKELEEERNRKELAEYEWKLSGKKKKYKEKKVVVNKDERNWLQKYWIVILSLMFLIISFLYYILYIAPIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01154710;
90% Identity
iTF_01148516; iTF_01149254; iTF_01147785; iTF_01140619; iTF_01144241; iTF_01144985; iTF_01150046; iTF_01139350; iTF_01145657;
80% Identity
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