Smon017696.1
Basic Information
- Insect
- Sericinus montela
- Gene Symbol
- nfxl1
- Assembly
- GCA_029286605.1
- Location
- JAGSMR010000075.1:1114736-1117207[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1 2.7e+04 -7.8 5.6 15 19 133 137 132 137 0.81 2 18 0.032 8.8e+02 0.7 0.4 4 10 168 174 167 174 0.96 3 18 1.5e-07 0.0042 17.7 15.9 3 19 185 201 184 201 0.95 4 18 3.7e-08 0.001 19.7 17.0 3 19 238 254 226 254 0.91 5 18 5.3e-10 1.4e-05 25.5 10.7 1 19 289 307 289 307 0.98 6 18 1.9e-07 0.0052 17.4 18.9 3 18 344 359 336 360 0.86 7 18 0.31 8.5e+03 -2.5 0.4 1 5 369 373 369 378 0.82 8 18 0.95 2.6e+04 -4.0 0.9 5 10 383 388 383 388 0.89 9 18 4.8e-06 0.13 12.9 18.2 1 18 394 411 394 412 0.97 10 18 2.9e-09 7.9e-05 23.2 16.8 1 19 421 439 421 439 0.99 11 18 1.7e-05 0.46 11.1 5.3 9 19 487 497 485 497 0.90 12 18 0.00037 10 6.9 7.0 1 12 507 517 507 517 0.96 13 18 0.16 4.2e+03 -1.5 3.5 14 18 546 550 546 551 0.87 14 18 0.05 1.4e+03 0.1 0.5 7 12 566 571 566 578 0.83 15 18 0.00049 13 6.5 6.0 1 11 587 597 581 598 0.92 16 18 0.00066 18 6.0 14.9 3 18 628 644 627 645 0.82 17 18 0.1 2.9e+03 -1.0 1.8 9 16 674 681 672 682 0.84 18 18 1.4e-07 0.0037 17.8 11.1 1 16 686 700 686 706 0.86
Sequence Information
- Coding Sequence
- ATGGCTCGAAGATACCGCGATGCAGCTGCAAAATTGCAGCAAAATGTACAAAAGCATTTGAAAGAGATGAAGGATCTTTCTTCTTCTGAGGATGAAGAGCCTTTTGAAGCTACTGTACTTGATGGTGTATTTCAAAGTTACTGGAGAGGTGGTGGTGACACACAATTGCTTAATAGAACAAAGAATGTTTTAGAAGAAGCTCTAAGCGGCCGCAACATAACGTGTCTTATATGCATAGGGTCTATTAAACGGGCTCATGCTGTATGGAGTTGTGGATATTGCTACTCAtattttcatctttcttgtATACAAAAGTGGGGAAATGATTGTGTGAGCCTCAAAGATGAGACACAAGCCCCCATCGCTGTTtttgtaccaaaaaaaattgaatGGTGTTGTCCAAAATGTCGACATTCCTACAGTAAAGAAGAAATCCCACGAAAATATCTCTGTTTTTGTGGCAAAACTGATAATCCACCATTGCATCCATGGTTAATACCACATTCGTGTGGAGAGGTTTGTGAAAAGAGGGTTTCTATAGGAAATAATTGTAAACATAAGTGTCTTTTACTTTGCCACCCTGGGCCATGCCCACCTTGTCCTCAAACTGTGAATGGGGTTTGCTATTGTGGAAAGGAATGTAAAAGAGTAAGATGTAGTACTGGGAGATGGTCTTGCGGACAACAGTGTAAGAAGCTTCTGCCTTGTAAATCTCACAAATGTGAAAATGTTTGTCATGAAGGCGATTGTCCACCATGTAGTTATACGAGCCTCCAATCTTGTCAATGCGGTGCTGAAAAAAGAAAACGTCCATGTAATGATTTGCAATGGCAGTGCCTAAAGAAATGTAATAAGCCGTTTTCATGTGGCTACCACACATGTGAAGTGGTTTGTCATTCTGGCGATTGTGGATTGTGCCCCAATTCGGGCTTAATGTCATGCCCATGTGGTGCGAATCAGCGCTATGTTCAGTGTCCAGATGCAATGGAGACATGCTTGGGTACATGTGGCAAGAGACATGAGGATTGTGAGCACACCTGTCCAGAGAAATGCCACAAAGGCCCCTGCCCACCTTGCCTTGTTATGATAGAAAAGGTTTGTCAGTGTGGCACACATTCTAGAGCTTTACCATGTAGCAAAGAATACAAATGTGATTCAAAATGCAGGGGAATACGGCCCTGTGGCAAGCATGCCTGTGGACGTAAATGTTGTAATGGCAGTTGCCCACCATGTGAAAAGATTTGTGATAAACCATTGCAGTGTGGCCGTCACAAGTGTACATCAATTTGCCATCATGGCCCCTGTTATCCATGTCCAAGGGAATCGAAAATAACATGTAGGTGTAAGGAAACCTATATCACAGTGCCTTGTGGCAGAGAAAAGAACATCAAACCACCTAAATGCAGTTTACCTTGTAAAATCAAGTATAAATGTGGTCACATAGTGGAAAATAATCATTTATGCCATTTCGGAGATTGCCCTCCATGTAAAGCTGTGTGTTtcaaaacatatgaaaaatgtGGACACCAATGCAAGGCAATATGCCATGAATATGTAACTGTAGTGTTCAAGCAAGTGGAAAAACCAGCCACACCGTGGGAGATACAACCACCGAAATCTAAAATTATGGCATTAGATTGCCCACCTTGCGAGATGCCAGTTCCAGTCACTTGTTTTGGTGAGCATGAAGTGGAACAGCAGCCATGCCACTCGGCATCCCGACGACCATGCGGCAGGGAATGTGGTCGCATACTTCAATGTACAAATCATACATGTACGCTCCTCTGTCACTTTTATACCTACAATCCTGATTATCCAAATGTGCCTTATGCATGCAAACTATGTGATAAAGAATGTATGGTAGTCCGTCCAGAAAAGTGCACACATAAGTGTGCAAAACGTGGTTGTCACCCAGGACTGTGCCCCCCGTGTGAGGTACTAGAGCGAATTCGCTGCCATTGTGGTGTCACCGAATTTTATTTCAAGTGTAAAGAGCTAGCTACAGCGACGGAAGAGATGCTTTGCTGTCAGCAGCAATGTCCAAAGATGCTGGAATGTGGTCATAGGTGTAAGAAACTTTGCCATCCAGGTCAGTGTAAAGATGACCAAGTCTGCTTAAAGAAGACAAAAGTGCACTGTGCCTGTggtaatttgaaaaaagaagCGCCTTGCAAAGCAGTACGTCAGAAAGAAGTTATGGTTATTTGTGATGCTAGTTGTGAAGCTAAACTAAAAGCAGCAAAGGTAGAGAAGGAGAAAGAGGAAAGGAGACTAAAGGAactagaagaagaaagaaaccgTAAAGAACTAGCAGAATATGAATGGAAGTTGAGTGGTaaaaagaagaagtataaagaaaagaaaacaacaaTTAATAAAGATGAAAGAAATTGGTTTCAAAAATATTGGATTACAATtgtatctttaataattttagtaatagcATTCCtatactacatattttttatatga
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKDLSSSEDEEPFEATVLDGVFQSYWRGGGDTQLLNRTKNVLEEALSGRNITCLICIGSIKRAHAVWSCGYCYSYFHLSCIQKWGNDCVSLKDETQAPIAVFVPKKIEWCCPKCRHSYSKEEIPRKYLCFCGKTDNPPLHPWLIPHSCGEVCEKRVSIGNNCKHKCLLLCHPGPCPPCPQTVNGVCYCGKECKRVRCSTGRWSCGQQCKKLLPCKSHKCENVCHEGDCPPCSYTSLQSCQCGAEKRKRPCNDLQWQCLKKCNKPFSCGYHTCEVVCHSGDCGLCPNSGLMSCPCGANQRYVQCPDAMETCLGTCGKRHEDCEHTCPEKCHKGPCPPCLVMIEKVCQCGTHSRALPCSKEYKCDSKCRGIRPCGKHACGRKCCNGSCPPCEKICDKPLQCGRHKCTSICHHGPCYPCPRESKITCRCKETYITVPCGREKNIKPPKCSLPCKIKYKCGHIVENNHLCHFGDCPPCKAVCFKTYEKCGHQCKAICHEYVTVVFKQVEKPATPWEIQPPKSKIMALDCPPCEMPVPVTCFGEHEVEQQPCHSASRRPCGRECGRILQCTNHTCTLLCHFYTYNPDYPNVPYACKLCDKECMVVRPEKCTHKCAKRGCHPGLCPPCEVLERIRCHCGVTEFYFKCKELATATEEMLCCQQQCPKMLECGHRCKKLCHPGQCKDDQVCLKKTKVHCACGNLKKEAPCKAVRQKEVMVICDASCEAKLKAAKVEKEKEERRLKELEEERNRKELAEYEWKLSGKKKKYKEKKTTINKDERNWFQKYWITIVSLIILVIAFLYYIFFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154710;
- 90% Identity
- -
- 80% Identity
- -