Taea022252.1
Basic Information
- Insect
- Troides aeacus
- Gene Symbol
- nfxl1
- Assembly
- GCA_033220335.2
- Location
- CM067293.1:7577376-7579865[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.065 9.2e+02 0.6 0.4 4 10 169 175 168 175 0.96 3 19 3.1e-07 0.0044 17.6 15.9 3 19 186 202 185 202 0.95 4 19 8e-07 0.011 16.3 11.5 3 19 239 255 237 255 0.92 5 19 0.97 1.4e+04 -3.1 0.8 6 10 280 284 279 284 0.90 6 19 8.6e-09 0.00012 22.6 12.4 1 19 290 308 290 308 0.98 7 19 6.3e-07 0.0088 16.7 17.0 3 19 345 361 337 361 0.86 8 19 1 1.4e+04 -3.2 1.8 5 10 384 389 384 389 0.93 9 19 5.4e-06 0.076 13.7 18.3 1 18 395 412 395 413 0.97 10 19 3.5e-09 5e-05 23.9 17.1 1 19 422 440 422 440 0.99 11 19 3.4e-05 0.47 11.1 5.9 7 19 486 498 486 498 0.89 12 19 0.00022 3.1 8.5 7.2 1 12 508 518 508 518 0.97 13 19 0.31 4.4e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 19 0.81 1.1e+04 -2.9 0.2 8 12 568 572 567 572 0.76 15 19 0.00072 10 6.9 5.8 1 11 588 598 582 599 0.92 16 19 0.76 1.1e+04 -2.8 1.6 15 18 613 616 612 617 0.83 17 19 2.5e-05 0.36 11.5 13.4 3 18 629 645 628 646 0.84 18 19 0.23 3.3e+03 -1.1 1.6 9 16 675 682 673 683 0.84 19 19 7.1e-05 1 10.1 10.2 1 16 687 701 687 706 0.92
Sequence Information
- Coding Sequence
- ATGGCTAGAAGGTATCGAGACGCCGCTGCAAAATTGCAGCAAAATGTTCAAAAACATTTACAGGAAATGAAAGACCTCTCCTCGTCTGAGGATGAAGAACCGTTTGAAGCTAGCGTACTGGACGGCGTTTTCCAAAGTTACTGGAGGGGTGGAGGAGACACACAATTGCTAAACAGAACAAAAAATCTTCTAGAAGAAGCTATAAGCGGCCGCAACATAACCTGTCTTATATGTATCGGCTCAATTAAACGAGTCCACGCTATTTGGAATTGCGATCATTGTTACTCGTATTTCCATATTTCATGCATACAAAAGTGGGCCAACGACTGTGTCAGTCTGAAAAGTGATGACAATCATGGGCCTATTGCTGTTTTCGTACCCAAGAAAATTGAATGGTGTTGTCCAAAATGTCGACATTCGTACAGCAAAGACGAAATTCCGCGGAAATATCTCTGTTTTTGTGGTAAGACCGATAATCCTCCATTTCATCCCTGGCTAATACCACATTCATGTGGGGAAGTCTGTGAAAAAAGACTTTCAACAGGCAATAATTGTAAACACAAATGCCTTCTACTCTGCCACCCTGGGCCATGTCCGCCATGTCCACAGACTGTTAATGAACAGTGTTATTGTAAAAAGGAATATAAAAGAGTGAGATGTAGTGCAGGGAAATGGTCTTGTGGACAGCAATGTAAAAAAACATTGCAATGTAGGACACACAAATGTGAAAGTATTTGTCATGAAGCAGATTGTCCACCATGCAGATACACAAGTATACAACCCTGCCAGTGTGGTGCTGAAAAAATAAAACGACCTTGTAATGATGTTGACTGGTATTGTGAGAAAAAATGTGGCCAACCTTTTTCATGTGGCTACCACAAATGTGACAAAACATGTCACTCAGGTGACTGTGGTTTATGTCCGAATTCTGGTTTAATGTCATGCCCATGTGGAGCAAATCAGCGTTATATACAATGTCCTGACACAATGGAGACTTGTTTGGGAACATGTGGCAAGAAAAGAGAGGATTGTGAGCATTATTGCCCTGAGAAATGCCACAAGGGGCCTTGTCCTCCTTGCCAGGTCATGGTGGAGAAGATTTGTCAGTGTTCAACACACACTAAGTCTCTACCATGCAGTAAAGAATTCAAATGTGAATCAAAATGTAGAGGTACTCGGCCATGTGGTAAGCATGCTTGTGGTCGTAAATGCTGCAATGGTAACTGTCCTCCATGTGAAAAAGTTTGTGACAAACCTTTACAGTGTGGTAGACATAAATGCACTTCAGTATGTCACCATGGACCATGCTATCCATGTCCACGAGAGTCTAAGATAACATGCAGATGTAAAGAAACTTATGTCACAGTACCATGTGGAAGAGAGAGAAACACTAGAGCACCTAAATGTAGCCTGCCCTGCAAAATTAAGTACAAGTGTGGTCATATGGAGGAAAACCAACACCTGTGTCATTTCGGAGACTGTCCACCTTGCAAAGCTATATGTTTCAAGACATATGAGAAATGTGGTCACAAGTGTAAGGCTATTTGCCACAAATTTGTAACAGTTGTGTTCAAGCAAGTAGAGAAACCGGCAACACCATGGGAGATACAACCTCCTAAGTCTAAAGTAATGACATTAGATTGTCCTCCGTGTGAGGAACCTGTACCCGTTGCTTGTTTTGGTGAACATGAAGTTGAAAATCAATCTTGTCATTCAGCAGCTCAAAGACCATGTGGTAGACAATGTGGCCGGCCACTTGGATGCACAAATCATACATGCTCACTGCTCTgccatttttataattataatcctAAACATCCAAATGTGCCTTATTCATGTAAACCTTGTGATAAAGAATGTTTGGTAATCCGTCCAAAAAAGTGTACTCATAAATGTGCAAAGAGAATATGTCACCCTGGGTCTTGTCCTCCATGTGACATTTTAGAAAGAATCCGCTGCCACTGTGGAGTCACTGAACTTTATATAAGATGTAAGGAGCTGATAAACACAACAGAAGAAATCCTCTGTTGTCAGCAGCAGTGTCCTAAAATGTTGGATTGTGGTCACAGATGTAAGAAACTTTGTCACTCAAACCAATGTAAAGAAAGCCAAATATGCTTGAAGAAAACTAAAGTGCACTGTGCATGTGGTAACTTGAAGAAGGAAGCTCCATGTAATGTGATAAAAGAGGAAGGAAtcaaagttatttgtgataaaaGCTGCGAAGAAAAGCTAGCGGCAGCTAAGATCgaaaaagaaagagaagaaaaacGACAAAAAGAATTGGAGGAAGAAAGAAATCGTAAAGAGTTAGCAGAATATGAGTGGAAGTTAAGCggcaaaaagaaaaaatataaggaGAAGAAAGTAGTTATTGATAAGGCTAATCGGAGTTGGCTTCAAAACTATTGGTTAATGATAATATCAGCATTATTTATTGTGGTAGCATTTTTATACTATGTTTTGTGTGTAacagaaacagtagtgtga
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQEMKDLSSSEDEEPFEASVLDGVFQSYWRGGGDTQLLNRTKNLLEEAISGRNITCLICIGSIKRVHAIWNCDHCYSYFHISCIQKWANDCVSLKSDDNHGPIAVFVPKKIEWCCPKCRHSYSKDEIPRKYLCFCGKTDNPPFHPWLIPHSCGEVCEKRLSTGNNCKHKCLLLCHPGPCPPCPQTVNEQCYCKKEYKRVRCSAGKWSCGQQCKKTLQCRTHKCESICHEADCPPCRYTSIQPCQCGAEKIKRPCNDVDWYCEKKCGQPFSCGYHKCDKTCHSGDCGLCPNSGLMSCPCGANQRYIQCPDTMETCLGTCGKKREDCEHYCPEKCHKGPCPPCQVMVEKICQCSTHTKSLPCSKEFKCESKCRGTRPCGKHACGRKCCNGNCPPCEKVCDKPLQCGRHKCTSVCHHGPCYPCPRESKITCRCKETYVTVPCGRERNTRAPKCSLPCKIKYKCGHMEENQHLCHFGDCPPCKAICFKTYEKCGHKCKAICHKFVTVVFKQVEKPATPWEIQPPKSKVMTLDCPPCEEPVPVACFGEHEVENQSCHSAAQRPCGRQCGRPLGCTNHTCSLLCHFYNYNPKHPNVPYSCKPCDKECLVIRPKKCTHKCAKRICHPGSCPPCDILERIRCHCGVTELYIRCKELINTTEEILCCQQQCPKMLDCGHRCKKLCHSNQCKESQICLKKTKVHCACGNLKKEAPCNVIKEEGIKVICDKSCEEKLAAAKIEKEREEKRQKELEEERNRKELAEYEWKLSGKKKKYKEKKVVIDKANRSWLQNYWLMIISALFIVVAFLYYVLCVTETVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154710;
- 90% Identity
- iTF_01495466;
- 80% Identity
- -