Pdar013599.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Papilio dardanus
Gene Symbol
nfxl1
Assembly
GCA_013186455.1
Location
QDHC01000439.1:55563-58561[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 1.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.052 5e+02 0.9 0.2 4 10 169 175 168 176 0.96
3 17 3.1e-07 0.003 17.6 15.9 3 19 186 202 185 202 0.95
4 17 1.4e-05 0.14 12.3 15.1 3 19 239 255 227 255 0.91
5 17 1.3e-09 1.3e-05 25.2 12.2 1 19 290 308 290 308 0.99
6 17 4.8e-06 0.045 13.9 18.1 3 18 345 360 337 361 0.86
7 17 6.7e-05 0.64 10.2 20.3 1 18 395 412 395 413 0.97
8 17 2e-10 1.9e-06 27.9 14.2 1 19 422 440 422 440 0.99
9 17 0.00029 2.8 8.1 8.0 9 19 488 498 486 498 0.92
10 17 0.00079 7.5 6.8 7.2 1 12 508 518 508 518 0.97
11 17 0.37 3.6e+03 -1.8 3.3 14 18 547 551 547 552 0.85
12 17 0.17 1.6e+03 -0.7 0.4 8 12 568 572 567 580 0.79
13 17 0.016 1.5e+02 2.6 4.6 3 11 590 598 581 599 0.79
14 17 0.75 7.2e+03 -2.8 1.6 15 18 613 616 612 617 0.83
15 17 0.0067 63 3.8 17.5 4 18 630 645 628 646 0.79
16 17 0.51 4.8e+03 -2.2 2.2 9 16 675 682 673 683 0.85
17 17 9.8e-05 0.94 9.7 10.0 1 15 687 700 687 706 0.92

Sequence Information

Coding Sequence
ATGGCTCGAAGATATCGCGACGCCGCTGCAAAAATGCAGCAAAAtgttcaaaaacatttaaaagaaatggAGCAAAATTTATCATCTGAAGATGAAGAACCATTTGAAGTCAGCGTATTGGACGGCGTGTTCCAGAGCTACTCGAGAGGTGGAGGTGATACTCAATTGCTCAACCGGACCAAGAATTTACTAGAAGAAGCCATTAGCGGCCGAAACATAACGTGTCTTATATGTATAGGTTCGATCAAAAGAGTTCACGCTATTTGGAATTGCGACAACTGTTATTCGTATTTTCACTTATCCTGTATACAAAAGTGGGCGAACGACTGCGTGAGCCTCAAAAATGATGATAATCATGGACCTATTAGCGTATTTGTACCTAAGAAAGTCGAATGGTGCTGTCCGAAATGCCGGCAAGCGTACAATAAGGAACAAATACCTCATAAATATCGTTGTTTCTGTACCAAAACTGATAACCCACCTATCCATCCCTGGTTAATACCACATTCATGTGGTGAAGTCTGTGGTAAAAGACTATCCATTGgtaataattgtaaacacAAGTGCCTACTGCTATGCCATCCTGGCCCTTGCCCGCCGTGCCCTCAAATGGTAAGTGACACATGTTATTGTCAAAAggaacataaaaaagttagaTGCAGTGCAGGCAAATGGTCCTGTGGTAGTCAATGTAAGAGAATACTGCCATGTAAATCACATAAATGTGAAAACATTTGCCATGATGATGACTGTCCTCCGTGCAGTTACACAAGCCTACAAGCCTGTCAATGTGGGAGTGAGAAGATTAAACGTCCATGCAATGATCTCGAATGGCAatgcattaaaatatgtaataaaccATTCACTTGTGGTTACCACAAATGTGACAGGTTATGCCATTCAGGTAGTTGTGGTTCATGTCCCAACTCTGGTCTAAAGTCTTGCCCATGTGGTGCAAATCAACAGTTTGTGCAATGCCCAGATGTGATGGAAACATGTGTAGGGACTTGTGGAAAAAAACATGAAGATTGTGAGCATAATTGCCCTGAGAAATGTCATAAAGGTTCATGTCCACCTTGTCTGGTTATGATTGAGAAAATTTGTCAATGTACCACACATACCAGATCACTACCATGCAGTAAAGAGTTCAGATGTGATACAAAATGCAGGGGAACCCGACCATGTGGGAAACATGGGTGTGGCCGTAAATGTTGTAATGGAAACTGCCCACCGTGTGAAAAGATTTGTGACAAACCTCTGCAGTGCGGCCGGCATAAATGTACATCAGTATGCCATCGTGGCCCATGCTACCCTTGTCCTAGAGAATCAAAAATAACTTGCAGATGCAAAGAAACTTATATTACAGTTCCTTGTGGCAGAGAAAAGAATATGAAGCCACCAAAATGTAGTTTACCTTGTAAGATCAAGTATAAATGTGGACATTCAGATGAAAACCATCACTTATGCCATTTTGGTGACTGCCCACCGTGTAAGGCAATATGTTTTAAGACATTTGAAAAATGTGGTCACCAATGTAAAGCTATATGTCATAAATATGTGACTGTAGTATTTAAGCAGGTGGAAAAACCTGCCACACCCTGGGAAATACAGCCTCCAAAGTCTAAAATAATGACATTAGAATGCCCACCATGTGAGGAACCTGTAACTGTTGCTTGTTTCGGTGATCATGAGGTTACTAACCAGCCATGCCACTCTGCATCAAGGAAACCATGTGGGAGAGCATGTGGGCAACTTCTAAAGTGCCTAAACCACTTATGTTCAGAAATGTGTcacttatacaaatataattctgATTATCAAAATGTGCCTTACTCGTGCAAGCCATGTGATAAAGAATGTTTAGTAGACCGTCCAGAAAAATGCACGCATAAATGTGCTATTGGCCATTGTCACCCTGGACCTTGTCCACCTTGTGATACAATGGAACGGGTCCGTTGTCATTGTGGGGTAGCTGAACTATATTTTAGATGTAAAAAGTTGTCCACAACTACTGAAGAAATGCTTTGCTGTGGCCAGCAGTGTCCAAAGATGTTGCAATGTGGACATAGATGTAAGAAAGTTTGCCATTCAAGTAAATGCAGTGAAAACCAAATATGTTTGAAGAAAACTAAAGTCCATTGTGCATGTGGCAATTTGAAGAAGGAAGCTCCTTGCAATGCTGTTCAGGAACATGAAGTAAAAGTTGTTTGTGACAAGAGTTGTGAAGAAAAGAAAGCTGCAGCcaagaaagagaaagaaagaGAGGAAAAAAGACTTAAAGAATTAGAGGAAGAAAGAAATCGCAAAGAGTTAGCTGAGTATGAATGGAAATTGAGTggcaaaaagaaaaaatacaaggAAAAGAAGGTTGTAGTTAATAAAGATGAGAGAAATTGGCTTCAAAAATAttggataataattttatctgtaatatttttgatcacatcatttttatattacatttatgtgATTACACCAATTGTGTAA
Protein Sequence
MARRYRDAAAKMQQNVQKHLKEMEQNLSSEDEEPFEVSVLDGVFQSYSRGGGDTQLLNRTKNLLEEAISGRNITCLICIGSIKRVHAIWNCDNCYSYFHLSCIQKWANDCVSLKNDDNHGPISVFVPKKVEWCCPKCRQAYNKEQIPHKYRCFCTKTDNPPIHPWLIPHSCGEVCGKRLSIGNNCKHKCLLLCHPGPCPPCPQMVSDTCYCQKEHKKVRCSAGKWSCGSQCKRILPCKSHKCENICHDDDCPPCSYTSLQACQCGSEKIKRPCNDLEWQCIKICNKPFTCGYHKCDRLCHSGSCGSCPNSGLKSCPCGANQQFVQCPDVMETCVGTCGKKHEDCEHNCPEKCHKGSCPPCLVMIEKICQCTTHTRSLPCSKEFRCDTKCRGTRPCGKHGCGRKCCNGNCPPCEKICDKPLQCGRHKCTSVCHRGPCYPCPRESKITCRCKETYITVPCGREKNMKPPKCSLPCKIKYKCGHSDENHHLCHFGDCPPCKAICFKTFEKCGHQCKAICHKYVTVVFKQVEKPATPWEIQPPKSKIMTLECPPCEEPVTVACFGDHEVTNQPCHSASRKPCGRACGQLLKCLNHLCSEMCHLYKYNSDYQNVPYSCKPCDKECLVDRPEKCTHKCAIGHCHPGPCPPCDTMERVRCHCGVAELYFRCKKLSTTTEEMLCCGQQCPKMLQCGHRCKKVCHSSKCSENQICLKKTKVHCACGNLKKEAPCNAVQEHEVKVVCDKSCEEKKAAAKKEKEREEKRLKELEEERNRKELAEYEWKLSGKKKKYKEKKVVVNKDERNWLQKYWIIILSVIFLITSFLYYIYVITPIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01154710;
90% Identity
iTF_01142813;
80% Identity
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