Porl016000.1
Basic Information
- Insect
- Parnassius orleans
- Gene Symbol
- nfxl1
- Assembly
- GCA_029286625.1
- Location
- JAGSMP010000043.1:2569377-2571851[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3 7.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.19 4.7e+03 -0.3 0.4 4 10 169 175 168 175 0.95 3 19 4.7e-07 0.012 17.6 15.9 3 19 186 202 185 202 0.95 4 19 1.2e-07 0.0031 19.5 16.9 3 19 239 255 227 255 0.91 5 19 2.5e-09 6.1e-05 24.9 11.7 1 19 290 308 290 308 0.98 6 19 2.4e-06 0.059 15.4 19.3 3 19 345 361 337 361 0.86 7 19 2.8 7.1e+04 -4.0 0.9 5 10 384 389 384 389 0.89 8 19 8e-06 0.2 13.7 18.3 1 18 395 412 395 413 0.97 9 19 2.3e-09 5.8e-05 25.0 14.5 1 19 422 440 422 440 0.98 10 19 0.00012 3 9.9 5.8 9 19 488 498 486 498 0.90 11 19 0.0031 78 5.4 8.7 1 12 508 518 508 518 0.96 12 19 0.47 1.2e+04 -1.5 3.5 14 18 547 551 547 552 0.87 13 19 0.72 1.8e+04 -2.1 1.3 8 12 568 572 567 579 0.79 14 19 0.0052 1.3e+02 4.7 5.3 1 11 588 598 582 599 0.91 15 19 1 2.6e+04 -2.6 1.4 15 18 613 616 612 617 0.83 16 19 0.00056 14 7.8 16.9 3 18 629 645 628 646 0.82 17 19 3 7.5e+04 -6.5 3.4 9 13 652 656 652 656 0.71 18 19 0.91 2.3e+04 -2.5 1.6 10 16 676 682 674 683 0.79 19 19 0.00012 2.9 10.0 10.9 1 16 687 701 687 706 0.93
Sequence Information
- Coding Sequence
- ATGGCACGTAGATATCGCGACGCTGCTGCAAAATTGCAACAAAATGTACAAAAGCATTTAAAGGAAATGAAGGAACTTTCATCGTCCGATGATGAAGAACCCTTTGAAACTAGCGTACTGGACGGTGTATTTCAAAGCTATTGGAGAGGTGGAGGCGACACACAAATGctaaatagaacaaaaaatctaTTAGAAGAAGCCGTAAGCGGTCGAAATATTACTTGTCTTATATGTATAGGGTCTATCAAACGAGCTCATGCCATATGGAATTGTGACCATTGCTACTCTTATTTTCACCTCTCTTGCATACAAAAGTGGGCGAACGACTGCGTGAGTCTAAAAAGCGATGAGACTCAAGGCCCTATCACTGTTTTTGTACCAAGAAAAATTGAATGGTGTTGCCCGAAATGTAGACATTCATACAGCAAAGAAAAAATTCCGCGTAAATACCGATGTTTCTGTGGCAAAACTGATAATCCACCCCTTCACCCCTGGCTAATACCCCATTCCTGTGGTGAAATTTGTGAAAAAAGACTTTCATCAGGGAATCACTGTAAACATAAATGCCTTCTACTCTGCCACCCTGGGCCTTGCCCACCATGTCCGCAAATGGTTAATGGAGTTTGCTATTGTGAGAAAGAACATAAAAAAGTAAGATGTAGTACTGGAAGTTGGTCTTGTGGACAACAATGTAAGCAAATCCTTCCATGTAAATCTCACAAGTGTGAGAATGTTTGCCATGATGGTGATTGTCCTCCATGCAGTTATACAAGCTTACAACCATGTCAGTGTGGTGCTCTAAAAGTAAAACGTCCATGCAATGATTTAGAATGGCAGTGTAGTAAGAAATGTAACAAGCCATTTTCATGTGGATACcacaaatgtgaaaaaatatgcCATTCTGGTGACTGTGGATTATGTCCGAATTCTGGTTTAATGTCCTGCCCATGTGGGGCAAATCAACGGTATGTACAATGTCCAGATATGATGGAAACATGTTTAAGTACATGTGGTAAGAAACATGAAAACTGTGAACATAACTGCCCAGAAAAATGCCATAAAGGTCCATGTCCACCTTGCCAGGTTATGATTGAGAAGAAATGCCAATGCTCAACACACACTAGGGCACTACCCTGTAGTAAAGAGTTCAAGTGTGACTCAAAGTGCAGGGGCACTCGCCCCTGTGGTAAACATGCATGTGGACGTAAATGTTGCAATGGTAACTGTCCGCCATGTGAAAAAATTTGTGATAAGCCCTTACAGTGTGGCCGCCACAAATGCATCTCAGTTTGTCATCATGGTCCTTGTTATCCTTGTTCTAGGGAATCAAAAATAACCTGTAGATGTAAAGAAACATATATCACTGTGCCTTGTGgcagagaaaaaaatataaaaccaccAAAATGCAGTCTCCCTTGTaagattaaatataaatgtggccatatagaggaaaacaaacattTGTGTCATTTTGGTGAATGTCCGCCTTGCAAAGCAATATGCTTGAAGGCATACCAGAAGTGTGGTCACCAGTGTAAAGCTACATGCCACGAATATGTGACACTTGTATTTAAACAAGTAGAAAAACCTGCGACACCATGGGAGATACAGCCTCCAAAGTCCAAAGTAATGACATTAGATTGTCCTCCATGTGAAATGCCTGTCCCAGTAACTTGTTTTGGTGAGCATGAGATAGAACATCAACCATGTCATTCTGCATCTAGACGACCATGTGGCCGAGAATGTGGTCGCCCACTTGAATGCACTAATCATTCTTGTATACTTCTCTGCcatttatttacttacaatCCAGATTACCCCAATGTGCCTTATAAATGTAAGCCATGTGATAAAGAATGTTTGGCAGTCCGTCCAGAAAAATGCACTCATAAATGTGCAAAACGTGGTTGTCACCCTGGACCATGTCCTCCATGCGAATTATTTGAGCGCATCCCCTGTCATTGTGGTGTAACAGAACTTTATTTACGGTGTAGAGAGCTATCGACTGCAACCGAAGAAATGTTTTGTTGCCAGCAGCAATGTCCAAAGATGTTAGACTGTGGTCACAGGTGTAAGAAACTATGTCATCCAGATCAGTGTAAAGAAAACCAAATTTGTTTGAAAAAGACAAAAGTGCACTGTAATTGTGGTAATTTGAAAAAAGAAGCACCATGCAATGCGGTGCGacaacaagaaataaaaattaattgtgaCAACAGTTGTGAGGCTAAACAAACAGCAGCAAAGATAGAGAAAGAAAGAGAAGAAAGGAGGCTGAAAGAGCtagaagaagaaagaaaccgTAGAGAGTTGGCAGAATACGAGTGGAAGTTGAGTGGcaaaaagaaaaagtataagGAAAAGAAAATGACCATTAATAGAGATGAAAGAAATTGGCTTCAAAAGTATTGGATTATTATTACGTCTATGGTGGCTTTATTGATTGCGTTTGTATACTATGTACTGTACATTTAA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKELSSSDDEEPFETSVLDGVFQSYWRGGGDTQMLNRTKNLLEEAVSGRNITCLICIGSIKRAHAIWNCDHCYSYFHLSCIQKWANDCVSLKSDETQGPITVFVPRKIEWCCPKCRHSYSKEKIPRKYRCFCGKTDNPPLHPWLIPHSCGEICEKRLSSGNHCKHKCLLLCHPGPCPPCPQMVNGVCYCEKEHKKVRCSTGSWSCGQQCKQILPCKSHKCENVCHDGDCPPCSYTSLQPCQCGALKVKRPCNDLEWQCSKKCNKPFSCGYHKCEKICHSGDCGLCPNSGLMSCPCGANQRYVQCPDMMETCLSTCGKKHENCEHNCPEKCHKGPCPPCQVMIEKKCQCSTHTRALPCSKEFKCDSKCRGTRPCGKHACGRKCCNGNCPPCEKICDKPLQCGRHKCISVCHHGPCYPCSRESKITCRCKETYITVPCGREKNIKPPKCSLPCKIKYKCGHIEENKHLCHFGECPPCKAICLKAYQKCGHQCKATCHEYVTLVFKQVEKPATPWEIQPPKSKVMTLDCPPCEMPVPVTCFGEHEIEHQPCHSASRRPCGRECGRPLECTNHSCILLCHLFTYNPDYPNVPYKCKPCDKECLAVRPEKCTHKCAKRGCHPGPCPPCELFERIPCHCGVTELYLRCRELSTATEEMFCCQQQCPKMLDCGHRCKKLCHPDQCKENQICLKKTKVHCNCGNLKKEAPCNAVRQQEIKINCDNSCEAKQTAAKIEKEREERRLKELEEERNRRELAEYEWKLSGKKKKYKEKKMTINRDERNWLQKYWIIITSMVALLIAFVYYVLYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154710;
- 90% Identity
- iTF_01160165;
- 80% Identity
- -