Lspi003796.2
Basic Information
- Insect
- Leistus spinibarbis
- Gene Symbol
- retn
- Assembly
- GCA_933228875.1
- Location
- CAKOGB010000070.1:528554-535655[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-19 4.8e-16 59.3 0.0 18 89 7 76 3 76 0.94 2 2 1.4 4.7e+03 -1.5 0.0 31 38 220 227 182 251 0.70
Sequence Information
- Coding Sequence
- ATGCCTGAAGTATCCTGTACTCCAATAAATCGGCTGCCCATAATGGCAAAGTCTGTACTAGATTTGTACGAACTGTACAATTTAGTAATTGCTAGGGGGGGCCTGGTGGACGTCATCAACAAGAAGTTATGGCAGGAAATAATTAAGGGGTTGCACTTACCATCTTCCATCACCTCGGCAGCGTTCACATTACGGACACAATATATGAAATACTTATACCCTTACGAGTGCGAAAAAAGACGTTTGAGCACTCCTGCTGAACTCCAGGCAGCCATTGACGGCAACAGGAGAGAGGGACGAAGAAGCAGTTACGGCACCTACTCAGAAATGGTGCAAAGAAGTCCGATCCCTTCGTCGCAGATGTCCCCCCTGTCACTGGTGACCCAACAGCAGAGCCTAGCGGGTCGAGGGGGGCTAGGCGCTGGTTTGGGGCTCCATAATGGGGCACACCACCCCAGCCATCCGCAGCCGCTCGGGCAACCACCCACGGGTGGCCCAGTGCCAGGCTTGGCTCCGTCTGAATTCGAGGCGCGTATGGTTGAATACGTGAAACTATTAAACAAAGAGCTGCGTAGTTCAGCAGCCACACCCCCCAGACAAGGTTCCTCGTCCCCACCGACGGCCACGTCCCCACTAAACCCCCTAGAAATGTCCCGTTTGACCCTGTGGAACTTATACAATAACAATCCAACACCTCCCTGTCCTGAGCCCCAAAAAGAGCCCCTTAATTTGGCTGAATCCACGCTCGCTGTTGCGAATTCGGTTAAACGGGAACCGGAACGGGACCCCCCACCGCCCGCCAAACGGTTAGCCCACGAGGAGGACCGGCGGAGCCCGACTACCACACCGAATACCCACATCAAAATAAACAGTAGGGGTGATGCACGAAATGGAGACAATTCTCTTGTAGTTAGTATGGAATTAAACGGTGTAATGTATCAGGGTGTTTTGTTTGCGCAGTCGCCGCCAGCGGCGCGCACAGCGCGTCTCGCATCTTGA
- Protein Sequence
- MPEVSCTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYSEMVQRSPIPSSQMSPLSLVTQQQSLAGRGGLGAGLGLHNGAHHPSHPQPLGQPPTGGPVPGLAPSEFEARMVEYVKLLNKELRSSAATPPRQGSSSPPTATSPLNPLEMSRLTLWNLYNNNPTPPCPEPQKEPLNLAESTLAVANSVKREPERDPPPPAKRLAHEEDRRSPTTTPNTHIKINSRGDARNGDNSLVVSMELNGVMYQGVLFAQSPPAARTARLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00902819; iTF_01039908; iTF_01040639; iTF_01275046; iTF_00469416; iTF_00004462; iTF_01286990; iTF_00766193; iTF_01104053; iTF_00767894; iTF_00028501; iTF_01229530; iTF_01050175;
- 90% Identity
- iTF_01040639;
- 80% Identity
- -