Aful031461.1
Basic Information
- Insect
- Agonum fuliginosum
- Gene Symbol
- retn
- Assembly
- GCA_947534325.1
- Location
- OX384045.1:9776682-9785076[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-17 1.8e-13 52.2 0.1 29 89 4 62 1 62 0.93 2 2 1.5 8.5e+03 -1.3 0.0 8 38 171 209 164 210 0.55
Sequence Information
- Coding Sequence
- ATGGCCAAATCAGTATTGGACCTTTACGAATTATACAACTTAGTTATTGCTCGGGGTGGGTTAGTCGACGTCATCAACAAAAAACTGTGGCAAGAAATCATCAAAGGACTGCATTTACCGTCGTCGATTACTTCGGCTGCATTTACACTTCGAACACAGTACATGAAATACCTCTACCCCTACGAGTGCGAAAAGCGTCGTTTATCGACGCCCGCGGAGCTCCAGGCCGCTATCGACGGCAACCGGCGCGAGGGGCGTCGCAGTAGTTACGGCACGTACTCAGAGATGGTGCAGCGTAGTCCCGTGCCGTCCTCACAGATGTCGCCACTGTCGCTGGTGACGCAACAACAGAGCCTGGCTGCCAGGAGCGGACTGGGCGCCGGACTGGGGCTCCACAATGGGGCCCACCATCCCAGCCATCCGCAGCCTATGGGGCAACCGCCATCAGGCGGCCCAGTCCCCGGCCTCGCGCCCTCCGAGTTCGAGGCGCGCATGGTAGAGTACGTGAAGCTGCTGAACAAGGAGCTGCGCAGCTCGGCCACGCCGCCGTCCTCCAGCCCGCCTAGCACCACGTCGCCTCTCAACCCGCTGGAGATGTCGCGGCTGACGCTGTGGAACCTCTACAACAACAACGCCGCGCCGCCGTGCCCCGAGCCGCAGAAGGAGGCGCTCAACCTCTCGGAGCCGCTCCCGGTGAACACGGTCAAGAGGGAACCGGAGCGCGAGCGTGAGCCCCCAGCGAAGAGGCTTCATGAGGAGGAGAGCAGCCACAAGGCGACCAACACGCATATCAAAATCAACCAGAGAGGTGACGCAAGAAATGGCGACAACTCCCTTGTAGTGAGCATGGAGTTAAACGGCGTAACATATCAAGGAGTGTTGTTCGCACAGTCACCACCAGGCGCACGCAGCGCGCGGCTAGCATCTTAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYSEMVQRSPVPSSQMSPLSLVTQQQSLAARSGLGAGLGLHNGAHHPSHPQPMGQPPSGGPVPGLAPSEFEARMVEYVKLLNKELRSSATPPSSSPPSTTSPLNPLEMSRLTLWNLYNNNAAPPCPEPQKEALNLSEPLPVNTVKREPEREREPPAKRLHEEESSHKATNTHIKINQRGDARNGDNSLVVSMELNGVTYQGVLFAQSPPGARSARLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00872844;
- 90% Identity
- -
- 80% Identity
- -