Aori029249.2
Basic Information
- Insect
- Acanthacorydalis orientalis
- Gene Symbol
- retn
- Assembly
- GCA_034766995.1
- Location
- CM068321.1:23343161-23356456[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-19 5.6e-16 59.9 0.0 17 89 9 79 4 79 0.93 2 2 5.2 2.2e+04 -2.9 0.0 25 38 211 224 181 225 0.72
Sequence Information
- Coding Sequence
- ATGCAAGGAGGGATAGGAAAAGAATgcaCACCAATCAATCGATTACCGATCATGGCGAAATCGGTCCTCGACTTATATGAACTATATAATCTAGTAATAGCTCGTGGTGGATTAGTGGacgttattaacaaaaaattatggCAAGAAATCATCAAAGGATTGCATTTACCATCATCTATCACATCGGCCGCATTCACTTTACGCACACAATATATGAAGTACCTGTATCCATATGAATGCGAAAAACGACGTCTGAGTACTCCAGCTGAGCTTCAAGCTGCAATTGATGGTAATCGTCGCGAAGGGAGAAGAAGTAGTTACGGAACATACACAGAAATGGTACAGCGTAGCCCAGTACCCACATCACAAATGTCACCATTATCACTTGTTACACAGCAACAGAACATGGCTGCCAGAATCGGACTTACAAACGGTGTTCATCATCCGACCCATCCTCCACCTTTAGGCCAGCAGCCGGCAGGAGGTCCGATACCTGGACTAGCACCTTCGGAGTTCGAAGCACGCATGGTCGAGTACGTCAAACTTTTAAACAAAGAGTTACGGAATTCGGCCGCCACACCGCCTCATCAAGGTTCGTCGTCACCCTCCGGAGCGACGTCGCCGTTAAACGCGCTGGAAATGTCACGGTTGACGTTATGGaacttgtataataataattccgTGCCGCCGGAGCCCCAGAGAGAAGCGTTAAATTTATCAGACAGCACTCAACATCAACAGCCCGTTTCCATTAAGAGAGAATCGGATCGTGATGTGCCGCCACCTGCGAAGAGGCTTCTCCACGATGAAGAAATGAGTCCACCTCCAGCGCCACCTACTCCGACTCATCTAGGAAGTATgagtacaaatattaaaatatctaatagagGAGATGCACGTAATGGAGATAATTCACTTGTAGTGAGTATGGAATTAAATGGTGTTATGTACCAAGGTGTTTTGTTTGCCCAGCAAGCACAAAGTGGTACACGTAGAATTACAAcataa
- Protein Sequence
- MQGGIGKECTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYTEMVQRSPVPTSQMSPLSLVTQQQNMAARIGLTNGVHHPTHPPPLGQQPAGGPIPGLAPSEFEARMVEYVKLLNKELRNSAATPPHQGSSSPSGATSPLNALEMSRLTLWNLYNNNSVPPEPQREALNLSDSTQHQQPVSIKRESDRDVPPPAKRLLHDEEMSPPPAPPTPTHLGSMSTNIKISNRGDARNGDNSLVVSMELNGVMYQGVLFAQQAQSGTRRITT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00872844;
- 90% Identity
- iTF_01050175;
- 80% Identity
- -