Hrub067418.1
Basic Information
- Insect
- Harpalus rubripes
- Gene Symbol
- retn
- Assembly
- GCA_963082715.1
- Location
- OY720461.1:38526409-38537766[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-17 3.1e-13 52.2 0.1 29 89 4 62 1 62 0.93 2 2 1.8 2.1e+04 -1.7 0.0 25 38 199 212 160 213 0.61
Sequence Information
- Coding Sequence
- ATGGCTAAATCAGTATTAGACTTATACGAATTATACAATTTGGTTATTGCAAGAGGGGGCTTAGTAGATGTTATCAACAAAAAATTGTGGCAAGAAATAATCAAAGGGCTGCATTTACCATCATCAATAACTTCAGCGGCCTTCACTCTTCGAACACAATATATGAAATACCTCTATCCCTACGAGTGCGAAAAGCGCCGACTTTCCACGCCGGCTGAACTCCAAGCAGCCATTGACGGCAACCGACGTGAAGGTCGCCGGTCAAGCTATGGTACCTACTCCGAAATGGTACAAAGATCACCAATACCAACCTCTCAAGTATCGCCCTTAAGTTTAGTGTCACAACAACAAGCGCTTGTTAGTAGGGCAGGGTTGGGTTTAGGGGGTATGGGGCTACATAATGGGGCCCACCATCCGAGTCACCCGCAACCTATGGGGCAACCACCGGCCGGCGGGCCAGTTCCAGGCCTAGCGCCCTCAGAATTCGAGGCCCGCATGGTCGAATACGTCAAACTACTAAACAAAGAACTTCGGACGTCCACTCCACCCAGACAGGGGTCAAATTCACCCCCAACTACCACCAGTCCTCTAAATCCTTTAGAAATGTCGCGGCTAACTTTGTGGAACCTTTATAACAATAATCCGCCTGCACATGACCAAAAGGAACCCCTAAATTTGTCAGAGGCGACAGTGGTGAAAAGAGAAGCCGATCGAGAAAGAGAGGAACCTCCCGCAAAAAAATTGCACGAAGAGAATTCGATACAGAGTACCAGTATTAAAATCAACAGTAGGGGCGATGCACGAAACGGCGATAACTCATTGGTAGTCAGTATGGAACTCAATGGCGTAACCTACCAGGGGGTGCTTTTTGCACAAGCGACTTCGAACAGAGGCGCCCGTCTCACTTCTTAG
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYSEMVQRSPIPTSQVSPLSLVSQQQALVSRAGLGLGGMGLHNGAHHPSHPQPMGQPPAGGPVPGLAPSEFEARMVEYVKLLNKELRTSTPPRQGSNSPPTTTSPLNPLEMSRLTLWNLYNNNPPAHDQKEPLNLSEATVVKREADREREEPPAKKLHEENSIQSTSIKINSRGDARNGDNSLVVSMELNGVTYQGVLFAQATSNRGARLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00872844;
- 90% Identity
- iTF_00767894;
- 80% Identity
- -