Hruf055452.2
Basic Information
- Insect
- Harpalus rufipes
- Gene Symbol
- retn
- Assembly
- GCA_951394225.1
- Location
- OX596289.1:661879-666945[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-20 9.6e-17 63.0 0.0 11 89 17 93 11 93 0.93 2 2 2.8 1.9e+04 -2.0 0.0 25 38 230 243 192 244 0.63
Sequence Information
- Coding Sequence
- ATGTCATCAACAATATTGATTTCAACATGTCATCATCTCCTAATCAACAAATTGATTTATTCGCGAAGAACCCCTATTAACCGACTACCTATAATGGCTAAATCAGTATTAGACTTATACGAATTATACAATTTGGTTATTGCAAGAGGCGGTTTAGTGgatgttataaacaaaaaactgTGGCAAGAAATCATTAAAGGACTGCACCTTCCATCATCAATAACATCAGCGGCGTTCACTCTTCGGACACAATACATGAAATACCTTTATCCCTACGAGTGCGAAAAGCGGCGACTTTCCACCCCGGCGGAACTTCAAGCCGCCATTGATGGCAATCGGCGTGAAGGTCGCCGATCTAGCTATGGTACCTACTCCGAAATGGTACAACGGTCACCAGTACCTACGTCTCAAGTATCGCCCTTAAGTTTAGTATCACAACAACAAGCCCTTGTTAGTAGGGCGGGATTAGGTTTAGCGGGGATGGGGCTGCACAATGGGGCCCACCATCCGAGTCACCCGCAACCTATGGGGCAACCACCGGCCGGCGGACCTGTACCAGGTCTAGCGCCTTCCGAGTTCGAAGCGCGTATGGTCGAATATGTGAAACTACTTAACAAAGAACTTCGGACCTCCACCCCACCTAGACAGGGGTCAAATTCACCCCCAACCACCACAAGTCCGCTAAATCCTCTAGAAATGTCGCGGCTAACTTTGTGGAACCTCTATAACAACAACCCTCCAGCACCTGAGCAAAAAGAGGCCCTCAATTTATCCGAGGCGACAGTGGTGAAGAGGGAGGCTGATAGAGAAAGAGAGGAACCTCCCGCCAAAAAACTACACGAGGAGAATTCTATACAGAGTACCAGTATTAAAATCAACAGTAGGGGGGATGCACGAAACGGCGATAATTCATTGGTAGTCAGTATGGAACTCAATGGCGTAACCTACCAGGGGGTGCTTTTTGCACAAGCGACTTCGAACAGAGGCGCCCGTCTCACTTCTTAG
- Protein Sequence
- MSSTILISTCHHLLINKLIYSRRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYSEMVQRSPVPTSQVSPLSLVSQQQALVSRAGLGLAGMGLHNGAHHPSHPQPMGQPPAGGPVPGLAPSEFEARMVEYVKLLNKELRTSTPPRQGSNSPPTTTSPLNPLEMSRLTLWNLYNNNPPAPEQKEALNLSEATVVKREADREREEPPAKKLHEENSIQSTSIKINSRGDARNGDNSLVVSMELNGVTYQGVLFAQATSNRGARLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00872844;
- 90% Identity
- iTF_00766193; iTF_01104053;
- 80% Identity
- -