Oard007824.2
Basic Information
- Insect
- Ophonus ardosiacus
- Gene Symbol
- retn
- Assembly
- GCA_943138245.1
- Location
- CALPBP010000188.1:406295-417706[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-19 1.1e-15 59.4 0.0 18 89 4 73 2 73 0.94 2 2 2.4 1.6e+04 -2.0 0.0 26 38 211 223 172 224 0.64
Sequence Information
- Coding Sequence
- atgttacGAACTCCAATAAACCGGCTACCAATAATGGCCAAATCAGTATTAGATTTATACGAATTATACAATTTGGTTATTGCCAGAGGCGGCTTAGTCGACGTCATCAACAAAAAATTATGGCAGGAGATTATCAAAGGATTGCATTTACCATCTTCAATAACTTCAGCGGCCTTCACTCTTCGAACACAATACATGAAATACCTATATCCTTACGAGTGCGAAAAGCGCCGACTTTCCACCCCGGCTGAACTCCAAGCCGCCATTGACGGCAACCGTCGTGAAGGTCGCCGATCCAGTTATGGTACCTACTCAGAAATGGTACAACGATCCCCAATACCTACGTCTCAAGTATCCCCGTTAAGTTTAGTCTCTCAACAACAAGCGCTTGCCAGTAGGGCAGGCCTGGGTTTAGGGGGAATGGGACTACACAACGGGGCACACCATCCGAGTCACCCACAACCAATGGGGCAACCGCCGGCTGGAGGGCCTGTGCCAGGTCTAGCCCCCTCTGAATTCGAGGCCCGCATGGTCGAATACGTCAAACTACTAAACAAAGAACTTCGGACCTCTACCCCACCCAGACAGGGGTCAAATTCACCCCCTAGTACCACAAGTCCTTTAAATCCTCTAGAAATGTCCCGACTAACTTTATGGAACCTTTATAACAATAATCCCCCTGCACCTGAGCAAAAAGAGGCCCTCAATTTGTCTGAGGCGACAGTAGTCAAGAGAGAGgcagacagagagagagaagaACCCCCGGCGAAAAAACTGCACGAGGAGAATTCCATACAGAGTACCAGTATTAAAATCAACAGTAGGGGAGATGCCCGAAACGGCGATAACTCATTGGTAGTCAGTATGGAACTCAATGGCGTCACTTACCAAGGGGTTCTTTTCGCACAAGCCACTTCAAACAGAGGCGCCCGTCTCACTTCTTAG
- Protein Sequence
- MLRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYSEMVQRSPIPTSQVSPLSLVSQQQALASRAGLGLGGMGLHNGAHHPSHPQPMGQPPAGGPVPGLAPSEFEARMVEYVKLLNKELRTSTPPRQGSNSPPSTTSPLNPLEMSRLTLWNLYNNNPPAPEQKEALNLSEATVVKREADREREEPPAKKLHEENSIQSTSIKINSRGDARNGDNSLVVSMELNGVTYQGVLFAQATSNRGARLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00872844;
- 90% Identity
- iTF_00767894;
- 80% Identity
- -