Hsem009922.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hipparchia semele
Gene Symbol
nfxl1
Assembly
GCA_933228835.1
Location
CAKOGE010000053.1:2657667-2660165[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 2.3e+04 -7.8 5.6 15 19 135 139 134 139 0.81
2 18 0.011 1.2e+02 3.2 0.3 4 10 170 176 169 177 0.97
3 18 3.1e-07 0.0036 17.6 15.9 3 19 187 203 186 203 0.95
4 18 1.8 2.1e+04 -4.0 1.1 6 10 228 232 227 232 0.82
5 18 1.9e-07 0.0022 18.3 12.9 3 18 240 255 238 256 0.91
6 18 1.3e-09 1.5e-05 25.2 12.6 1 19 291 309 291 309 0.99
7 18 5.9e-05 0.67 10.4 21.5 3 19 346 362 338 362 0.86
8 18 1.2 1.4e+04 -3.5 0.4 7 11 366 370 366 370 0.84
9 18 6.7e-05 0.77 10.2 20.3 1 18 396 413 396 414 0.97
10 18 1.3e-07 0.0015 18.9 16.0 1 19 423 441 423 441 0.98
11 18 7.4e-05 0.84 10.1 6.1 9 19 489 499 487 499 0.90
12 18 0.00081 9.2 6.7 5.9 1 11 508 517 508 518 0.95
13 18 0.31 3.6e+03 -1.5 3.5 14 18 547 551 547 552 0.87
14 18 0.45 5.2e+03 -2.0 0.1 8 12 568 572 568 574 0.81
15 18 5.5e-06 0.063 13.7 4.6 1 11 588 598 588 599 0.97
16 18 0.52 5.9e+03 -2.2 1.1 15 18 613 616 612 617 0.82
17 18 0.00061 6.9 7.1 15.8 3 18 629 645 628 646 0.82
18 18 1.5e-05 0.17 12.3 10.5 1 18 687 706 687 707 0.86

Sequence Information

Coding Sequence
ATGTCTAGAAGATACCGCGATGCTGCTGCCAAATTACAGGAAAATGTTAACAAACACTTACAAACTATACAACATGAAGTGTCCTCTTCAGAAGATGAAGAACCCTATGAGCAAAATGTTCTGGATGGTGTGTTTCAAAGCTATTGGAGGGGTGGTGGAGACAAACAAATGCTGGAAAGAACTAAAAATCTTCTGGAAGAAGTAATAAGTGTTAGATCTGTCACATGTCTAATCTGTATCGGTTCTATAAAGCGGGCGGACGCAATATGGACATGTGAACATTGCTACTCTTACTTCCATCTATCGTGTATTCAAAAGTGGTCAAATGATAGCATCAGCTTACGCAGCGAAGAAAACCATGGCCCAATAGCAGTGTTCAGATCCAAGAAAATTGAATGGTGCTGTCCAAAATGTAGACATTCCTATGGCAAAGAGGATATTCCCCGAAAGTACCGTTGCTTTTGCGGCAAGACTGATGATCCTGCTTACCATCCTTGGTTGATTCCTCACACTTGTGGGGAAGTATGCGGAAAGAGACTGTCTTTAGGAGAAACCTGTAAGCATAAATGTCTGCTGCTGTGTCATCCAGGTCCATGCCCTCCCTGTCCACAGACGGTGAACAGAGCATGCTACTGTGGgaaggaaaataagagagtcagATGCAGCGCAGCCCTTTGGTCTTGCCAGCAACACTGTAAAAAGATTCTGCCTTGTAAGTCACATAAATGTGAAATTAAATGTCATGATGGAGACTGTCCTCCTTGCAACTACACAAGCTTACAACCTTGTCAGTGTGGAGCAGAGAAGACGAAGAGACCTTGCAATGATCTTGTGTGGCAGTGTACAAAGAAATGTGATAAACCATTTGCATGCGGATATCACCGATGTGAGAGGATCTGTCACACTGGCAGTTGTGGTTCATGCCCACACTCTGGAGTTCAATCTTGCCCATGTGGTTCCAATGAGCGCTACATACAATGCCCTGATGTGATTGAGACATGCGTCAGCACTTGTGGCAAGAAGCATGATGACTGTGAACATCATTGCCCAGCAAAATGTCATAAGGGACCTTGTCCACCATGCCAAGtattgattgaaaaaaaatgcCACTGCTCAACACATACTCGATCACTTCCCTGTAGTAAGGACTTCAGATGTGAAACTAAATGTAGAGGCATAAGACCATGCGGTAAACATGGTTGTGGACGAAAATGTTGCAATGGAAACTGCCCTCCTTGTGAAAAAATCTGTGATAAACCTTTACAATGCAGCAGACATAAATGTACCACCGTGTGCCATCATGGGCCATGCTATCCTTGTCCATTGGAATCTAAGGTAACCTGCCGctgtaaagaaacatttataACAGTTCCGTGTGGCAGAGAAAAACACACACGACCACCAAAATGTAACCTTCCATGCAAGATTAAGTATAAATGTGGGCATGCTGAAGAAAATAAACATACTTGTCATTTTGGTGACTGTCCACCGTGTAAAGCCATTTGTAACAAAACATACGAGTGTGGACATAGTTGTGCAGCCACATGTCATGCATATGTGTTGGTTGTATTTAAACAGGTGGAAAAGCCTGCTACACCATGGGAGATTAAGCCTTCCAAGACTAAAGTTGTAAACCTAGATTGCCCACCATGTGAAACCCCAGTGTTGGTCACGTGCTTCGGAGAACATGAGACAGATTACCAGCCGTGCCACACGGCTAGCCGTAGACCCTGTGGTCGTGAATGTGGCAGGCCACTTGAATGTGGAAATCACTCATGTGAACTACTCTGTCACTTGCATGAACATAATCCTGACTATCCAAATGTGCCTCATGCATGCAAACCATGCAATAAAGAATGCTTAAAAGGCCGTCCAGAAAAATGCACCCACAAATGTGCTAAACGTGGCTGTCATCCAGGGCAATGTCCACCGTGTGATGTCTTAGAAAGAATTCCATGTCATTGCAAAGTCACAGAAATGTATATGCGCTGTCGAGAGTTGGCTACTGCAACAGAAGAAATGATGAGTTGTAAACAGCAATGCCCAAAGAATTTAGATTGTGGTCATCGCTGTAAGAAGGTGTGTCACTCAGAACCTTGTAAAGATAACCAAACTTGCTTAAAAAAGACCAAAATTAACTGTCCCTGTGGTAATTTGAAAAGAGAGGCACCATGCAAGTCTGTCAGAAATTCTGAAATACAAATGTTGTGTGATGAAAGTTgtgaagctaaaaaaattgCTGCCAAGTTGGaaaaggaaaaagaagaaaaaagattaaaaGAATTGGAACTAGAGAAAAATCGAAGAGAATTAGAGGAATACGAATGGAAATTGAGTGGTAAGAAGAAAAAGTATAAAGAGAAGAAAATAGTGGTTAATAGGGATGAGAGAAGTTGGCTACGTAAATATTGTGTTCCTATTTTATCTATACCAGTAGTTATTATAGctgctatttattatatttttaatcctaatattaatagtaatgtTAATGAATGa
Protein Sequence
MSRRYRDAAAKLQENVNKHLQTIQHEVSSSEDEEPYEQNVLDGVFQSYWRGGGDKQMLERTKNLLEEVISVRSVTCLICIGSIKRADAIWTCEHCYSYFHLSCIQKWSNDSISLRSEENHGPIAVFRSKKIEWCCPKCRHSYGKEDIPRKYRCFCGKTDDPAYHPWLIPHTCGEVCGKRLSLGETCKHKCLLLCHPGPCPPCPQTVNRACYCGKENKRVRCSAALWSCQQHCKKILPCKSHKCEIKCHDGDCPPCNYTSLQPCQCGAEKTKRPCNDLVWQCTKKCDKPFACGYHRCERICHTGSCGSCPHSGVQSCPCGSNERYIQCPDVIETCVSTCGKKHDDCEHHCPAKCHKGPCPPCQVLIEKKCHCSTHTRSLPCSKDFRCETKCRGIRPCGKHGCGRKCCNGNCPPCEKICDKPLQCSRHKCTTVCHHGPCYPCPLESKVTCRCKETFITVPCGREKHTRPPKCNLPCKIKYKCGHAEENKHTCHFGDCPPCKAICNKTYECGHSCAATCHAYVLVVFKQVEKPATPWEIKPSKTKVVNLDCPPCETPVLVTCFGEHETDYQPCHTASRRPCGRECGRPLECGNHSCELLCHLHEHNPDYPNVPHACKPCNKECLKGRPEKCTHKCAKRGCHPGQCPPCDVLERIPCHCKVTEMYMRCRELATATEEMMSCKQQCPKNLDCGHRCKKVCHSEPCKDNQTCLKKTKINCPCGNLKREAPCKSVRNSEIQMLCDESCEAKKIAAKLEKEKEEKRLKELELEKNRRELEEYEWKLSGKKKKYKEKKIVVNRDERSWLRKYCVPILSIPVVIIAAIYYIFNPNINSNVNE